BLASTX nr result

ID: Panax21_contig00001725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001725
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putativ...   127   2e-27
ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   126   6e-27
ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|2...   123   5e-26
ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   116   4e-24
ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   115   8e-24

>ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 592

 Score =  127 bits (320), Expect = 2e-27
 Identities = 73/115 (63%), Positives = 80/115 (69%)
 Frame = -1

Query: 751 VKHHSLSIKGFIPEQNINLDDIKFKDKSXXXXXXXXXXXXKAATQQEEXXXXXXXXXXXT 572
           VKHHSLS  GF P ++I L+DIKFKDKS            K   QQ+E            
Sbjct: 479 VKHHSLSTVGFTPAEDIKLEDIKFKDKSREKQRKKNLQAKKEK-QQQEPKPQKPNKNPSA 537

Query: 571 AMTVMRKKTAKQRRAAQTVEDEDELAREYRLLKKLKKGAIDENEFAILTGTEELL 407
           A TVMRKKTAKQRRAAQTVEDEDEL+REYRLLKKLKKG IDE+EFA LTGTE+LL
Sbjct: 538 APTVMRKKTAKQRRAAQTVEDEDELSREYRLLKKLKKGTIDESEFAKLTGTEDLL 592


>ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
           vinifera]
          Length = 595

 Score =  126 bits (316), Expect = 6e-27
 Identities = 71/115 (61%), Positives = 81/115 (70%)
 Frame = -1

Query: 751 VKHHSLSIKGFIPEQNINLDDIKFKDKSXXXXXXXXXXXXKAATQQEEXXXXXXXXXXXT 572
           VKHHSLS +GF P ++IN ++IK+KDKS            KA  Q +E           T
Sbjct: 482 VKHHSLSTEGFTPVEDINFEEIKYKDKSREKQRKKNLQAKKAV-QDQEPKPQKPNKTPHT 540

Query: 571 AMTVMRKKTAKQRRAAQTVEDEDELAREYRLLKKLKKGAIDENEFAILTGTEELL 407
           A TVMRKKTAKQRR AQT+EDED+LAREYRLLKKLKKG IDE+EFA LTGTEELL
Sbjct: 541 APTVMRKKTAKQRRTAQTIEDEDDLAREYRLLKKLKKGTIDESEFAKLTGTEELL 595


>ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|222852002|gb|EEE89549.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score =  123 bits (308), Expect = 5e-26
 Identities = 70/115 (60%), Positives = 78/115 (67%)
 Frame = -1

Query: 751 VKHHSLSIKGFIPEQNINLDDIKFKDKSXXXXXXXXXXXXKAATQQEEXXXXXXXXXXXT 572
           VKHHSLS K F P  ++NL++IK+KDKS            K A QQE             
Sbjct: 479 VKHHSLSTKDFTPVDDLNLEEIKYKDKSRQKQRRKNLQAKKEARQQESKPQKVSKTPSAA 538

Query: 571 AMTVMRKKTAKQRRAAQTVEDEDELAREYRLLKKLKKGAIDENEFAILTGTEELL 407
           A T MRKKTAKQRRAAQTVEDE+ELAREYRLLKKLKKG IDE+EF  LTGT+ELL
Sbjct: 539 A-TAMRKKTAKQRRAAQTVEDEEELAREYRLLKKLKKGTIDESEFEKLTGTDELL 592


>ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine
           max]
          Length = 589

 Score =  116 bits (291), Expect = 4e-24
 Identities = 67/115 (58%), Positives = 77/115 (66%)
 Frame = -1

Query: 751 VKHHSLSIKGFIPEQNINLDDIKFKDKSXXXXXXXXXXXXKAATQQEEXXXXXXXXXXXT 572
           VKHHSLSI GF P ++INL DIK++DKS            K A ++E             
Sbjct: 477 VKHHSLSIDGFEPVEDINLGDIKYRDKSREKQRKKNLQAKKEAKEKEPKPQKPKKTPN-- 534

Query: 571 AMTVMRKKTAKQRRAAQTVEDEDELAREYRLLKKLKKGAIDENEFAILTGTEELL 407
           A T MRKKTA+QRRA QT+EDE+EL  EYRLLKKLKKG IDENE+A LTGTEELL
Sbjct: 535 APTDMRKKTARQRRAQQTMEDEEELMHEYRLLKKLKKGTIDENEYAKLTGTEELL 589


>ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
           sativus] gi|449515784|ref|XP_004164928.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
           sativus]
          Length = 587

 Score =  115 bits (289), Expect = 8e-24
 Identities = 63/115 (54%), Positives = 76/115 (66%)
 Frame = -1

Query: 751 VKHHSLSIKGFIPEQNINLDDIKFKDKSXXXXXXXXXXXXKAATQQEEXXXXXXXXXXXT 572
           VKHHSLS  GF+P ++IN +++K+KDKS            K A  Q++            
Sbjct: 475 VKHHSLSTDGFVPVEDINFEEVKYKDKSREKQRKKNLQAKKEA--QKKLPKPEPKKTPNV 532

Query: 571 AMTVMRKKTAKQRRAAQTVEDEDELAREYRLLKKLKKGAIDENEFAILTGTEELL 407
           A  ++RKKTA+QRRA QT EDEDELA EYRLLKKLKKG IDE E+A LTGTEELL
Sbjct: 533 AAPILRKKTARQRRATQTAEDEDELAHEYRLLKKLKKGTIDETEYAKLTGTEELL 587


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