BLASTX nr result

ID: Panax21_contig00001718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001718
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA73171.1| histone H1 [Apium graveolens]                         116   2e-24
gb|AAC41651.1| histone H1 [Nicotiana tabacum]                          98   6e-19
dbj|BAA88671.1| histone H1 [Nicotiana tabacum]                         98   6e-19
ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis] g...    94   1e-17
gb|ACU21235.1| unknown [Glycine max]                                   93   2e-17

>emb|CAA73171.1| histone H1 [Apium graveolens]
          Length = 302

 Score =  116 bits (290), Expect = 2e-24
 Identities = 68/138 (49%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
 Frame = +1

Query: 4   ILPTEGAEDSIPTPATELPEEK-PAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHPS 180
           I+P EG E+ +P   TE PEE  P AED                             HP 
Sbjct: 8   IVPMEGVEEEVPVTVTEAPEEAAPPAEDPAPKKGKELKPKKAAAPRKPRSAP----AHPP 63

Query: 181 YLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLVKIKN 360
           YLEMITDAIT+LK+R GSSQ AIQKF+E K K L   FR           AAGKLVK+K 
Sbjct: 64  YLEMITDAITSLKERTGSSQQAIQKFLEAKHKDLPAVFRKMLSNNLKKLVAAGKLVKVKA 123

Query: 361 SYKLPSTRSTAPAKKKPA 414
           SYKLPS +S+APAKKKPA
Sbjct: 124 SYKLPSAKSSAPAKKKPA 141


>gb|AAC41651.1| histone H1 [Nicotiana tabacum]
          Length = 282

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/88 (60%), Positives = 59/88 (67%), Gaps = 7/88 (7%)
 Frame = +1

Query: 169 THPSYLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLV 348
           THPSY EMI DAI TLKD+ GSSQ AI KFIE+KQK L   FR           A+GKLV
Sbjct: 58  THPSYFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLV 117

Query: 349 KIKNSYKLPSTRS-------TAPAKKKP 411
           K+K+SYKLP+ RS       TAPAKKKP
Sbjct: 118 KVKSSYKLPAARSAAPKAAATAPAKKKP 145


>dbj|BAA88671.1| histone H1 [Nicotiana tabacum]
          Length = 279

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/89 (59%), Positives = 59/89 (66%), Gaps = 7/89 (7%)
 Frame = +1

Query: 169 THPSYLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLV 348
           THPSY EMI DAI TLKD+ GSSQ AI KFIE+KQK L   FR           A+GKLV
Sbjct: 58  THPSYFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLV 117

Query: 349 KIKNSYKLPSTRS-------TAPAKKKPA 414
           K+K+SYKLP+ RS       TAP KKKPA
Sbjct: 118 KVKSSYKLPAARSAAPKAAATAPVKKKPA 146


>ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis]
           gi|223529105|gb|EEF31085.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 232

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/82 (60%), Positives = 59/82 (71%)
 Frame = +1

Query: 169 THPSYLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLV 348
           T+PS+LEMI DAI TLK+R GSSQ+AI KF+EEK K+L   FR           A+GKLV
Sbjct: 51  TYPSFLEMINDAIVTLKERTGSSQYAITKFVEEKHKKLPPNFRKLLLFHLKKLVASGKLV 110

Query: 349 KIKNSYKLPSTRSTAPAKKKPA 414
           K+KNS+KLPS RS APAKK  A
Sbjct: 111 KVKNSFKLPSARS-APAKKPAA 131


>gb|ACU21235.1| unknown [Glycine max]
          Length = 164

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/85 (61%), Positives = 58/85 (68%), Gaps = 5/85 (5%)
 Frame = +1

Query: 169 THPSYLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLV 348
           THPSY EMI DAIT+LK+R GSSQ AI KFIEEK KQL   FR           AAGKLV
Sbjct: 54  THPSYEEMIKDAITSLKERTGSSQHAIAKFIEEKHKQLPPNFRKLLLYHLKKLVAAGKLV 113

Query: 349 KIKNSYKLPSTR-----STAPAKKK 408
           K+K S+KLP TR     S++PAKKK
Sbjct: 114 KVKGSFKLPPTRPSASSSSSPAKKK 138


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