BLASTX nr result
ID: Panax21_contig00001718
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00001718 (416 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAA73171.1| histone H1 [Apium graveolens] 116 2e-24 gb|AAC41651.1| histone H1 [Nicotiana tabacum] 98 6e-19 dbj|BAA88671.1| histone H1 [Nicotiana tabacum] 98 6e-19 ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis] g... 94 1e-17 gb|ACU21235.1| unknown [Glycine max] 93 2e-17 >emb|CAA73171.1| histone H1 [Apium graveolens] Length = 302 Score = 116 bits (290), Expect = 2e-24 Identities = 68/138 (49%), Positives = 77/138 (55%), Gaps = 1/138 (0%) Frame = +1 Query: 4 ILPTEGAEDSIPTPATELPEEK-PAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHPS 180 I+P EG E+ +P TE PEE P AED HP Sbjct: 8 IVPMEGVEEEVPVTVTEAPEEAAPPAEDPAPKKGKELKPKKAAAPRKPRSAP----AHPP 63 Query: 181 YLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLVKIKN 360 YLEMITDAIT+LK+R GSSQ AIQKF+E K K L FR AAGKLVK+K Sbjct: 64 YLEMITDAITSLKERTGSSQQAIQKFLEAKHKDLPAVFRKMLSNNLKKLVAAGKLVKVKA 123 Query: 361 SYKLPSTRSTAPAKKKPA 414 SYKLPS +S+APAKKKPA Sbjct: 124 SYKLPSAKSSAPAKKKPA 141 >gb|AAC41651.1| histone H1 [Nicotiana tabacum] Length = 282 Score = 98.2 bits (243), Expect = 6e-19 Identities = 53/88 (60%), Positives = 59/88 (67%), Gaps = 7/88 (7%) Frame = +1 Query: 169 THPSYLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLV 348 THPSY EMI DAI TLKD+ GSSQ AI KFIE+KQK L FR A+GKLV Sbjct: 58 THPSYFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLV 117 Query: 349 KIKNSYKLPSTRS-------TAPAKKKP 411 K+K+SYKLP+ RS TAPAKKKP Sbjct: 118 KVKSSYKLPAARSAAPKAAATAPAKKKP 145 >dbj|BAA88671.1| histone H1 [Nicotiana tabacum] Length = 279 Score = 98.2 bits (243), Expect = 6e-19 Identities = 53/89 (59%), Positives = 59/89 (66%), Gaps = 7/89 (7%) Frame = +1 Query: 169 THPSYLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLV 348 THPSY EMI DAI TLKD+ GSSQ AI KFIE+KQK L FR A+GKLV Sbjct: 58 THPSYFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLV 117 Query: 349 KIKNSYKLPSTRS-------TAPAKKKPA 414 K+K+SYKLP+ RS TAP KKKPA Sbjct: 118 KVKSSYKLPAARSAAPKAAATAPVKKKPA 146 >ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis] gi|223529105|gb|EEF31085.1| histone h1/h5, putative [Ricinus communis] Length = 232 Score = 94.0 bits (232), Expect = 1e-17 Identities = 50/82 (60%), Positives = 59/82 (71%) Frame = +1 Query: 169 THPSYLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLV 348 T+PS+LEMI DAI TLK+R GSSQ+AI KF+EEK K+L FR A+GKLV Sbjct: 51 TYPSFLEMINDAIVTLKERTGSSQYAITKFVEEKHKKLPPNFRKLLLFHLKKLVASGKLV 110 Query: 349 KIKNSYKLPSTRSTAPAKKKPA 414 K+KNS+KLPS RS APAKK A Sbjct: 111 KVKNSFKLPSARS-APAKKPAA 131 >gb|ACU21235.1| unknown [Glycine max] Length = 164 Score = 93.2 bits (230), Expect = 2e-17 Identities = 52/85 (61%), Positives = 58/85 (68%), Gaps = 5/85 (5%) Frame = +1 Query: 169 THPSYLEMITDAITTLKDRNGSSQFAIQKFIEEKQKQLSGAFRXXXXXXXXXXTAAGKLV 348 THPSY EMI DAIT+LK+R GSSQ AI KFIEEK KQL FR AAGKLV Sbjct: 54 THPSYEEMIKDAITSLKERTGSSQHAIAKFIEEKHKQLPPNFRKLLLYHLKKLVAAGKLV 113 Query: 349 KIKNSYKLPSTR-----STAPAKKK 408 K+K S+KLP TR S++PAKKK Sbjct: 114 KVKGSFKLPPTRPSASSSSSPAKKK 138