BLASTX nr result

ID: Panax21_contig00001698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001698
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL69150.1| RNA polymerase [Nuphar advena]                         94   1e-17
emb|CBI36559.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    94   2e-17
emb|CAN79881.1| hypothetical protein VITISV_017990 [Vitis vinifera]    94   2e-17
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    92   6e-17

>emb|CBL69150.1| RNA polymerase [Nuphar advena]
          Length = 985

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/52 (86%), Positives = 47/52 (90%)
 Frame = -3

Query: 570  LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415
            LR KFVELYSMPILENLLESFQ S+P L FP LPDRGDFDLQ+VLESPYFFN
Sbjct: 934  LRLKFVELYSMPILENLLESFQTSFPTLVFPPLPDRGDFDLQEVLESPYFFN 985


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 570 LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415
           LR+KFVELYSMPILENLLESFQ S+P LTFP LPDRG+FDL++VLESPYFFN
Sbjct: 757 LREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 808


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 570  LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415
            LR+KFVELYSMPILENLLESFQ S+P LTFP LPDRG+FDL++VLESPYFFN
Sbjct: 928  LREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979


>emb|CAN79881.1| hypothetical protein VITISV_017990 [Vitis vinifera]
          Length = 305

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -3

Query: 570 LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415
           LR+KFVELYSMPILENLLESFQ S+P LTFP LPDRG+FDL++VLESPYFFN
Sbjct: 254 LREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 305


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = -3

Query: 570  LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415
            LR+KFVELYSMP+LE+LLE F+ +YPGLTFP LP RGDFDLQ+VL+SPYFFN
Sbjct: 924  LREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 975


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