BLASTX nr result
ID: Panax21_contig00001698
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00001698 (572 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBL69150.1| RNA polymerase [Nuphar advena] 94 1e-17 emb|CBI36559.3| unnamed protein product [Vitis vinifera] 94 2e-17 ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 94 2e-17 emb|CAN79881.1| hypothetical protein VITISV_017990 [Vitis vinifera] 94 2e-17 ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 92 6e-17 >emb|CBL69150.1| RNA polymerase [Nuphar advena] Length = 985 Score = 94.4 bits (233), Expect = 1e-17 Identities = 45/52 (86%), Positives = 47/52 (90%) Frame = -3 Query: 570 LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415 LR KFVELYSMPILENLLESFQ S+P L FP LPDRGDFDLQ+VLESPYFFN Sbjct: 934 LRLKFVELYSMPILENLLESFQTSFPTLVFPPLPDRGDFDLQEVLESPYFFN 985 >emb|CBI36559.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 93.6 bits (231), Expect = 2e-17 Identities = 44/52 (84%), Positives = 49/52 (94%) Frame = -3 Query: 570 LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415 LR+KFVELYSMPILENLLESFQ S+P LTFP LPDRG+FDL++VLESPYFFN Sbjct: 757 LREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 808 >ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis vinifera] Length = 979 Score = 93.6 bits (231), Expect = 2e-17 Identities = 44/52 (84%), Positives = 49/52 (94%) Frame = -3 Query: 570 LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415 LR+KFVELYSMPILENLLESFQ S+P LTFP LPDRG+FDL++VLESPYFFN Sbjct: 928 LREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979 >emb|CAN79881.1| hypothetical protein VITISV_017990 [Vitis vinifera] Length = 305 Score = 93.6 bits (231), Expect = 2e-17 Identities = 44/52 (84%), Positives = 49/52 (94%) Frame = -3 Query: 570 LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415 LR+KFVELYSMPILENLLESFQ S+P LTFP LPDRG+FDL++VLESPYFFN Sbjct: 254 LREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 305 >ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis sativus] Length = 975 Score = 92.0 bits (227), Expect = 6e-17 Identities = 41/52 (78%), Positives = 48/52 (92%) Frame = -3 Query: 570 LRKKFVELYSMPILENLLESFQISYPGLTFPRLPDRGDFDLQDVLESPYFFN 415 LR+KFVELYSMP+LE+LLE F+ +YPGLTFP LP RGDFDLQ+VL+SPYFFN Sbjct: 924 LREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLKSPYFFN 975