BLASTX nr result

ID: Panax21_contig00001695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001695
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   300   2e-79
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   299   4e-79
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         299   4e-79
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      299   4e-79
ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   298   5e-79

>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
            DNA-directed RNA polymerase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 997

 Score =  300 bits (768), Expect = 2e-79
 Identities = 141/161 (87%), Positives = 149/161 (92%)
 Frame = +2

Query: 2    LGECAKVIAMENQPVRWVTPLGLPVVQPYRKLGRRTIKTSLQMLTLQHETDKVMARRQRT 181
            LGECAKVIA ENQPV+W TPLGLPVVQPYR+LGR  IKTSLQML LQ ETDK+M +RQRT
Sbjct: 837  LGECAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQMLALQKETDKIMVKRQRT 896

Query: 182  AFPPNFVHSLDGSHMMMTATACKEAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEA 361
            AFPPNFVHSLDGSHMMMTA ACK AGLNFAGVHDSYWTHACDVD+MNRILRE FVELYEA
Sbjct: 897  AFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACDVDEMNRILRENFVELYEA 956

Query: 362  PILENLLDGFQTSFPKLNFPPLPERGDFDLREVLESPYFFN 484
            PILENLL+GFQ SFPKL FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 957  PILENLLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  299 bits (765), Expect = 4e-79
 Identities = 140/161 (86%), Positives = 150/161 (93%)
 Frame = +2

Query: 2    LGECAKVIAMENQPVRWVTPLGLPVVQPYRKLGRRTIKTSLQMLTLQHETDKVMARRQRT 181
            LG+CAK+IAMEN PVRW TPLGLPVVQPYRKLGR  IKTSLQ+LTLQ ETDKVM +RQRT
Sbjct: 842  LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 901

Query: 182  AFPPNFVHSLDGSHMMMTATACKEAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEA 361
            AFPPNFVHSLDGSHMMMTA ACKE+GL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+A
Sbjct: 902  AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDA 961

Query: 362  PILENLLDGFQTSFPKLNFPPLPERGDFDLREVLESPYFFN 484
            PILENLL+ FQ SFP L FPPLPERGDFDLREVLESPYFFN
Sbjct: 962  PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  299 bits (765), Expect = 4e-79
 Identities = 140/161 (86%), Positives = 150/161 (93%)
 Frame = +2

Query: 2    LGECAKVIAMENQPVRWVTPLGLPVVQPYRKLGRRTIKTSLQMLTLQHETDKVMARRQRT 181
            LG+CAK+IAMEN PVRW TPLGLPVVQPYRKLGR  IKTSLQ+LTLQ ETDKVM +RQRT
Sbjct: 842  LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 901

Query: 182  AFPPNFVHSLDGSHMMMTATACKEAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEA 361
            AFPPNFVHSLDGSHMMMTA ACKE+GL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+A
Sbjct: 902  AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDA 961

Query: 362  PILENLLDGFQTSFPKLNFPPLPERGDFDLREVLESPYFFN 484
            PILENLL+ FQ SFP L FPPLPERGDFDLREVLESPYFFN
Sbjct: 962  PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  299 bits (765), Expect = 4e-79
 Identities = 140/161 (86%), Positives = 150/161 (93%)
 Frame = +2

Query: 2    LGECAKVIAMENQPVRWVTPLGLPVVQPYRKLGRRTIKTSLQMLTLQHETDKVMARRQRT 181
            LG+CAK+IAMEN PVRW TPLGLPVVQPYRKLGR  IKTSLQ+LTLQ ETDKVM +RQRT
Sbjct: 555  LGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRT 614

Query: 182  AFPPNFVHSLDGSHMMMTATACKEAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEA 361
            AFPPNFVHSLDGSHMMMTA ACKE+GL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+A
Sbjct: 615  AFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDA 674

Query: 362  PILENLLDGFQTSFPKLNFPPLPERGDFDLREVLESPYFFN 484
            PILENLL+ FQ SFP L FPPLPERGDFDLREVLESPYFFN
Sbjct: 675  PILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 715


>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 1015

 Score =  298 bits (764), Expect = 5e-79
 Identities = 141/161 (87%), Positives = 148/161 (91%)
 Frame = +2

Query: 2    LGECAKVIAMENQPVRWVTPLGLPVVQPYRKLGRRTIKTSLQMLTLQHETDKVMARRQRT 181
            LG+CAKVIA ENQPVRW TPLGLPVVQPYRKLG+  IKTSLQMLTLQ ETDKVM  RQRT
Sbjct: 855  LGDCAKVIASENQPVRWTTPLGLPVVQPYRKLGKHIIKTSLQMLTLQRETDKVMVTRQRT 914

Query: 182  AFPPNFVHSLDGSHMMMTATACKEAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYEA 361
            AFPPNFVHSLDGSHMMMTA ACK+ GLNFAGVHDSYWTHACDVDKMNRILREKFVELYE 
Sbjct: 915  AFPPNFVHSLDGSHMMMTAVACKKEGLNFAGVHDSYWTHACDVDKMNRILREKFVELYET 974

Query: 362  PILENLLDGFQTSFPKLNFPPLPERGDFDLREVLESPYFFN 484
            P+LENLL+ FQ+SFP L+FP LPERGDFDLREVLESPYFFN
Sbjct: 975  PVLENLLESFQSSFPSLSFPSLPERGDFDLREVLESPYFFN 1015


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