BLASTX nr result

ID: Panax21_contig00001671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001671
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...   506   e-141
ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   505   e-141
emb|CBI15506.3| unnamed protein product [Vitis vinifera]              505   e-141
emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]   505   e-141
ref|XP_002322074.1| predicted protein [Populus trichocarpa] gi|2...   502   e-140

>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
            gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
            putative [Ricinus communis]
          Length = 770

 Score =  506 bits (1303), Expect = e-141
 Identities = 234/269 (86%), Positives = 253/269 (94%)
 Frame = +1

Query: 1    PNIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPNMLVSRFFR 180
            PNIQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQL+PNALPNMLVSRFFR
Sbjct: 214  PNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNALPNMLVSRFFR 273

Query: 181  VYTQWRWPNPVMLCTIEEGSLGLQIWDPRRNPKDRFHLMPIITPAYPCMNSSYNVSSSTL 360
            VYTQWRWPNPVMLC IEEGSLGLQ+WDPRRNPKDR+HLMPIITPAYP MNSSYNVS+STL
Sbjct: 274  VYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSASTL 333

Query: 361  RIMTEEFQRGYEICEAMEANKTDWVKLFEPYPFFESYKNYLQIDICAENDDDLRNWKGWV 540
            RIM+EEFQRG EICEAMEA+K DW  LFE + FF++YKNYLQIDI AEN+DDLR WKGWV
Sbjct: 334  RIMSEEFQRGNEICEAMEASKADWNTLFESFSFFDAYKNYLQIDIGAENEDDLRKWKGWV 393

Query: 541  ESRLRQLTLKIERHTFNMLQCHPHPGDFSDKTRPLHCSYFMGLQRKQGVPSSEGEQFDIR 720
            ESRLRQLTLKIERHTFNMLQCHPHPG+F+DK+RPLHCSYFMGLQRKQGVP++EGEQFDIR
Sbjct: 394  ESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRPLHCSYFMGLQRKQGVPANEGEQFDIR 453

Query: 721  LTVEEFKQSVANYMMWKPGMEICVSHVRR 807
            +TVEEFK SV  Y  WKPGMEI V+HV+R
Sbjct: 454  ITVEEFKISVNMYTSWKPGMEIHVTHVKR 482


>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  505 bits (1301), Expect = e-141
 Identities = 235/269 (87%), Positives = 248/269 (92%)
 Frame = +1

Query: 1    PNIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPNMLVSRFFR 180
            PNIQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALP+MLVSRFFR
Sbjct: 212  PNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFR 271

Query: 181  VYTQWRWPNPVMLCTIEEGSLGLQIWDPRRNPKDRFHLMPIITPAYPCMNSSYNVSSSTL 360
            VYTQWRWPNPVMLC IEEG+LGLQ+WDPR+ PKDRFHLMPIITPAYPCMNSSYNVSSSTL
Sbjct: 272  VYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTL 331

Query: 361  RIMTEEFQRGYEICEAMEANKTDWVKLFEPYPFFESYKNYLQIDICAENDDDLRNWKGWV 540
            RIM+EEF+RG EI E MEANK DW  L EPYPFFE+YKNYLQI+I AEN DDLR WKGWV
Sbjct: 332  RIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWV 391

Query: 541  ESRLRQLTLKIERHTFNMLQCHPHPGDFSDKTRPLHCSYFMGLQRKQGVPSSEGEQFDIR 720
            ESRLRQLTLKIERHT+NMLQCHPHPGDFSDK+RP HC YFMGLQRKQGVP+SEGEQFDIR
Sbjct: 392  ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIR 451

Query: 721  LTVEEFKQSVANYMMWKPGMEICVSHVRR 807
            LTV+EFK SV  Y +WKPGMEI V HVRR
Sbjct: 452  LTVDEFKHSVGMYTLWKPGMEIHVIHVRR 480


>emb|CBI15506.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  505 bits (1301), Expect = e-141
 Identities = 235/269 (87%), Positives = 248/269 (92%)
 Frame = +1

Query: 1    PNIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPNMLVSRFFR 180
            PNIQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALP+MLVSRFFR
Sbjct: 212  PNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFR 271

Query: 181  VYTQWRWPNPVMLCTIEEGSLGLQIWDPRRNPKDRFHLMPIITPAYPCMNSSYNVSSSTL 360
            VYTQWRWPNPVMLC IEEG+LGLQ+WDPR+ PKDRFHLMPIITPAYPCMNSSYNVSSSTL
Sbjct: 272  VYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTL 331

Query: 361  RIMTEEFQRGYEICEAMEANKTDWVKLFEPYPFFESYKNYLQIDICAENDDDLRNWKGWV 540
            RIM+EEF+RG EI E MEANK DW  L EPYPFFE+YKNYLQI+I AEN DDLR WKGWV
Sbjct: 332  RIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWV 391

Query: 541  ESRLRQLTLKIERHTFNMLQCHPHPGDFSDKTRPLHCSYFMGLQRKQGVPSSEGEQFDIR 720
            ESRLRQLTLKIERHT+NMLQCHPHPGDFSDK+RP HC YFMGLQRKQGVP+SEGEQFDIR
Sbjct: 392  ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIR 451

Query: 721  LTVEEFKQSVANYMMWKPGMEICVSHVRR 807
            LTV+EFK SV  Y +WKPGMEI V HVRR
Sbjct: 452  LTVDEFKHSVGMYTLWKPGMEIHVIHVRR 480


>emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
          Length = 1097

 Score =  505 bits (1300), Expect = e-141
 Identities = 235/269 (87%), Positives = 248/269 (92%)
 Frame = +1

Query: 1    PNIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPNMLVSRFFR 180
            PNIQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALP+MLVSRFFR
Sbjct: 392  PNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFR 451

Query: 181  VYTQWRWPNPVMLCTIEEGSLGLQIWDPRRNPKDRFHLMPIITPAYPCMNSSYNVSSSTL 360
            VYTQWRWPNPVMLC IEEG+LGLQ+WDPR+ PKDRFHLMPIITPAYPCMNSSYNVSSSTL
Sbjct: 452  VYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTL 511

Query: 361  RIMTEEFQRGYEICEAMEANKTDWVKLFEPYPFFESYKNYLQIDICAENDDDLRNWKGWV 540
            RIM+EEF+RG EI E MEANK DW  L EPYPFFE+YKNYLQI+I AEN DDLR WKGWV
Sbjct: 512  RIMSEEFKRGNEISEVMEANKADWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWV 571

Query: 541  ESRLRQLTLKIERHTFNMLQCHPHPGDFSDKTRPLHCSYFMGLQRKQGVPSSEGEQFDIR 720
            ESRLRQLTLKIERHT+NMLQCHPHPGDFSDK+RP HC YFMGLQRKQGVP+SEGEQFDIR
Sbjct: 572  ESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIR 631

Query: 721  LTVEEFKQSVANYMMWKPGMEICVSHVRR 807
            LTV+EFK SV  Y +WKPGMEI V HVRR
Sbjct: 632  LTVDEFKHSVGMYTLWKPGMEIHVIHVRR 660


>ref|XP_002322074.1| predicted protein [Populus trichocarpa] gi|222869070|gb|EEF06201.1|
            predicted protein [Populus trichocarpa]
          Length = 512

 Score =  502 bits (1293), Expect = e-140
 Identities = 233/272 (85%), Positives = 252/272 (92%), Gaps = 3/272 (1%)
 Frame = +1

Query: 1    PNIQ---NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPNMLVSR 171
            PNIQ   NFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQL+PNALPNMLVSR
Sbjct: 203  PNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNALPNMLVSR 262

Query: 172  FFRVYTQWRWPNPVMLCTIEEGSLGLQIWDPRRNPKDRFHLMPIITPAYPCMNSSYNVSS 351
            FFRVYTQWRWPNPVMLC IEEGSLGL +WDPRRNPKDR+HLMPIITPAYP MNSSYNVSS
Sbjct: 263  FFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSS 322

Query: 352  STLRIMTEEFQRGYEICEAMEANKTDWVKLFEPYPFFESYKNYLQIDICAENDDDLRNWK 531
            STLRIMTEEFQRG EICEAME +K +W  LFEP+ FFE+YKNYLQIDI AEN+DDLR WK
Sbjct: 323  STLRIMTEEFQRGNEICEAMEVSKAEWDTLFEPFSFFEAYKNYLQIDISAENEDDLRQWK 382

Query: 532  GWVESRLRQLTLKIERHTFNMLQCHPHPGDFSDKTRPLHCSYFMGLQRKQGVPSSEGEQF 711
            GWVESRLRQLTLKIERHT+NMLQCHPHPG+FSDK+RPLHCSYFMGLQRKQGVP +EGEQF
Sbjct: 383  GWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPLHCSYFMGLQRKQGVPVNEGEQF 442

Query: 712  DIRLTVEEFKQSVANYMMWKPGMEICVSHVRR 807
            DIR+TV+EFK SV  Y +WKPGMEI V+HV++
Sbjct: 443  DIRITVDEFKNSVNMYTLWKPGMEIRVTHVKK 474


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