BLASTX nr result

ID: Panax21_contig00001653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001653
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   329   1e-88
ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...   326   1e-87
ref|XP_002892977.1| nucleotidyltransferase family protein [Arabi...   319   2e-85
ref|XP_002322074.1| predicted protein [Populus trichocarpa] gi|2...   318   3e-85
ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   315   2e-84

>ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
           gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A)
           polymerase-like [Cucumis sativus]
          Length = 748

 Score =  329 bits (844), Expect = 1e-88
 Identities = 154/168 (91%), Positives = 164/168 (97%)
 Frame = -1

Query: 505 LDISQDSILQNTDEATVRSLNGCRVTDQILRLVPNIQSFRTTLRCLRLWAKRRGVYSNVS 326
           LDISQDSILQNTDE TVRSLNGCRVTD+ILRLVPNIQSFRTTLRC+R WAKRRGVYSNVS
Sbjct: 179 LDISQDSILQNTDEQTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVS 238

Query: 325 GFLGGVNWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQIWD 146
           GFLGG+NWALLVARICQLYPNALPNMLVSRFFRV+TQWRWPNPVMLCA EEGSLGLQ+WD
Sbjct: 239 GFLGGINWALLVARICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWD 298

Query: 145 PRRNHKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGYEICE 2
           PRRN KDR+HLMPIITPAYPCMNSSYNVS+STLRIMTEEF+RG++ICE
Sbjct: 299 PRRNPKDRYHLMPIITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICE 346


>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
           gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
           putative [Ricinus communis]
          Length = 770

 Score =  326 bits (836), Expect = 1e-87
 Identities = 154/168 (91%), Positives = 162/168 (96%)
 Frame = -1

Query: 505 LDISQDSILQNTDEATVRSLNGCRVTDQILRLVPNIQSFRTTLRCLRLWAKRRGVYSNVS 326
           LDISQDSILQN DE TVRSLNGCRVTDQILRLVPNIQ+FRTTLRC+R WAKRRGVYSNVS
Sbjct: 181 LDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVS 240

Query: 325 GFLGGVNWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQIWD 146
           GFLGG+NWALLVARICQL+PNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQ+WD
Sbjct: 241 GFLGGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWD 300

Query: 145 PRRNHKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGYEICE 2
           PRRN KDR+HLMPIITPAYP MNSSYNVS+STLRIM+EEFQRG EICE
Sbjct: 301 PRRNPKDRYHLMPIITPAYPSMNSSYNVSASTLRIMSEEFQRGNEICE 348


>ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297338819|gb|EFH69236.1|
           nucleotidyltransferase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 716

 Score =  319 bits (817), Expect = 2e-85
 Identities = 148/168 (88%), Positives = 158/168 (94%)
 Frame = -1

Query: 505 LDISQDSILQNTDEATVRSLNGCRVTDQILRLVPNIQSFRTTLRCLRLWAKRRGVYSNVS 326
           LDISQDSILQN DE TVRSLNGCRVTDQILRLVPNIQ+FRTTLRC+R WAKRRGVYSNVS
Sbjct: 174 LDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVS 233

Query: 325 GFLGGVNWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQIWD 146
           GFLGG+NWALLVARICQLYPNALPNML SRFFRVY QWRWPNPV+LC+++EGS GLQ+WD
Sbjct: 234 GFLGGINWALLVARICQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWD 293

Query: 145 PRRNHKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGYEICE 2
           PRRN KDR H+MPIITPAYPCMNSSYNVS+STLRIMT EFQRG EICE
Sbjct: 294 PRRNPKDRLHIMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKEICE 341


>ref|XP_002322074.1| predicted protein [Populus trichocarpa] gi|222869070|gb|EEF06201.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  318 bits (815), Expect = 3e-85
 Identities = 152/171 (88%), Positives = 160/171 (93%), Gaps = 3/171 (1%)
 Frame = -1

Query: 505 LDISQDSILQNTDEATVRSLNGCRVTDQILRLVPNIQS---FRTTLRCLRLWAKRRGVYS 335
           LD+SQDS+L N DE TVRSLNGCRVTDQILRLVPNIQ+   FRTTLRC+R WAKRRGVYS
Sbjct: 170 LDVSQDSMLHNADEQTVRSLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYS 229

Query: 334 NVSGFLGGVNWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQ 155
           NVSGFLGG+NWALLVARICQL+PNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGL 
Sbjct: 230 NVSGFLGGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLS 289

Query: 154 IWDPRRNHKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGYEICE 2
           +WDPRRN KDR+HLMPIITPAYP MNSSYNVSSSTLRIMTEEFQRG EICE
Sbjct: 290 VWDPRRNPKDRYHLMPIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICE 340


>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  315 bits (808), Expect = 2e-84
 Identities = 149/168 (88%), Positives = 160/168 (95%)
 Frame = -1

Query: 505 LDISQDSILQNTDEATVRSLNGCRVTDQILRLVPNIQSFRTTLRCLRLWAKRRGVYSNVS 326
           LD+SQDSILQN DE TVRSLNGCRVTDQILRLVPNIQ+FRTTLR +R WAKRRGVYSNV+
Sbjct: 179 LDVSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVA 238

Query: 325 GFLGGVNWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQIWD 146
           GFLGG+NWALLVARICQLYPNALP+MLVSRFFRVYTQWRWPNPVMLCAIEEG+LGLQ+WD
Sbjct: 239 GFLGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWD 298

Query: 145 PRRNHKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGYEICE 2
           PR+  KDRFHLMPIITPAYPCMNSSYNVSSSTLRIM+EEF+RG EI E
Sbjct: 299 PRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISE 346


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