BLASTX nr result

ID: Panax21_contig00001637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001637
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumba...   544   e-152
emb|CBI27775.3| unnamed protein product [Vitis vinifera]              539   e-151
ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis...   533   e-149
ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis...   529   e-148
ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communi...   526   e-147

>emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
          Length = 406

 Score =  544 bits (1401), Expect = e-152
 Identities = 260/287 (90%), Positives = 278/287 (96%), Gaps = 1/287 (0%)
 Frame = -3

Query: 858 MQQSLYHPGLLAPPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLLQEVFSSTGPL 679
           MQQSLYHPGLLAPPQIEPILSGNLPPGFDS+TCRSVYVGNIHPQVTEPLLQEVF+STGPL
Sbjct: 16  MQQSLYHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPL 75

Query: 678 EGCKLIRKEKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASSQREDTSGHFN 499
           EGCKLIRK+KSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYAS+QREDTS H+N
Sbjct: 76  EGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASAQREDTSNHYN 135

Query: 498 IFVGDLSPEVTDATLFACFSVYASCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINEL 319
           IFVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFR+QQ+AQSAIN+L
Sbjct: 136 IFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDL 195

Query: 318 NGKWLGSRQIRCNWAAKGAGNDDKQNSDAKSVVELTNGTSEDGQEN-INDDAPENNPQYT 142
           NGKWLGSRQIRCNWAAKGAG   +QNSDAKSVVELT+GTS+DGQE  +N+DAPENNPQYT
Sbjct: 196 NGKWLGSRQIRCNWAAKGAGAVGEQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYT 255

Query: 141 TVYVGNLGPEVTSVDLHRHFHSLNAGIIEDVRVQRDKGFGFVRFSNH 1
           TVYVGNL PEVTSVDLHRHFH+L AG+IEDVR+QRDKGFGFVR+S+H
Sbjct: 256 TVYVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVRYSSH 302


>emb|CBI27775.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  539 bits (1388), Expect = e-151
 Identities = 262/287 (91%), Positives = 275/287 (95%), Gaps = 2/287 (0%)
 Frame = -3

Query: 855 QQSLYH-PGLLAPPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLLQEVFSSTGPL 679
           QQSLYH PGLLAPPQIEPILSGNLPPGFDS+TCRSVYVGNIHPQVTEPLLQEVFSSTGPL
Sbjct: 21  QQSLYHHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPL 80

Query: 678 EGCKLIRKEKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASSQREDTSGHFN 499
           EGCKLIRKEKSSYGFVDYFDRRSAAL+IVTLNGRHLFGQPIKVNWAYASSQREDTSGH+N
Sbjct: 81  EGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYN 140

Query: 498 IFVGDLSPEVTDATLFACFSVYASCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINEL 319
           IFVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFR+QQ+AQSAIN+L
Sbjct: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDL 200

Query: 318 NGKWLGSRQIRCNWAAKGA-GNDDKQNSDAKSVVELTNGTSEDGQENINDDAPENNPQYT 142
           NG+WLGSRQIRCNWA KGA GN+DK NSDAKSVVELTNGTSEDG++  ND+APENN QYT
Sbjct: 201 NGRWLGSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYT 260

Query: 141 TVYVGNLGPEVTSVDLHRHFHSLNAGIIEDVRVQRDKGFGFVRFSNH 1
           TVYVGNL PEVTSVDLHRHFH+L AG IEDVRVQRDKGFGFVR+S H
Sbjct: 261 TVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTH 307


>ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
          Length = 426

 Score =  533 bits (1373), Expect = e-149
 Identities = 262/291 (90%), Positives = 275/291 (94%), Gaps = 6/291 (2%)
 Frame = -3

Query: 855 QQSLYH-PGLLAPPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLLQEVFSSTGPL 679
           QQSLYH PGLLAPPQIEPILSGNLPPGFDS+TCRSVYVGNIHPQVTEPLLQEVFSSTGPL
Sbjct: 21  QQSLYHHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPL 80

Query: 678 EGCKLIRKEKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASSQREDTSGHFN 499
           EGCKLIRKEKSSYGFVDYFDRRSAAL+IVTLNGRHLFGQPIKVNWAYASSQREDTSGH+N
Sbjct: 81  EGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYN 140

Query: 498 IFVGDLSPEVTDATLFACFSVYASCS----DARVMWDQKTGRSRGFGFVSFRSQQDAQSA 331
           IFVGDLSPEVTDATLFACFSVY SCS    DARVMWDQKTGRSRGFGFVSFR+QQ+AQSA
Sbjct: 141 IFVGDLSPEVTDATLFACFSVYPSCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSA 200

Query: 330 INELNGKWLGSRQIRCNWAAKGA-GNDDKQNSDAKSVVELTNGTSEDGQENINDDAPENN 154
           IN+LNG+WLGSRQIRCNWA KGA GN+DK NSDAKSVVELTNGTSEDG++  ND+APENN
Sbjct: 201 INDLNGRWLGSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENN 260

Query: 153 PQYTTVYVGNLGPEVTSVDLHRHFHSLNAGIIEDVRVQRDKGFGFVRFSNH 1
            QYTTVYVGNL PEVTSVDLHRHFH+L AG IEDVRVQRDKGFGFVR+S H
Sbjct: 261 LQYTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTH 311


>ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
          Length = 429

 Score =  529 bits (1362), Expect = e-148
 Identities = 260/294 (88%), Positives = 275/294 (93%), Gaps = 9/294 (3%)
 Frame = -3

Query: 855 QQSLYH-PGLLAPPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLLQEVFSSTGPL 679
           QQSLYH PGLLAPPQIEPILSGNLPPGFDS+TCRSVYVGNIHPQVTEPLLQEVFSSTGPL
Sbjct: 21  QQSLYHHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPL 80

Query: 678 EGCKLIRKEKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASSQREDTSGHFN 499
           EGCKLIRKEKSSYGFVDYFDRRSAAL+IVTLNGRHLFGQPIKVNWAYASSQREDTSGH+N
Sbjct: 81  EGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYN 140

Query: 498 IFVGDLSPEVTDATLFACFSVYASCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINEL 319
           IFVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFR+QQ+AQSAIN+L
Sbjct: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDL 200

Query: 318 NGKWLGSRQIRCNWAAKGA-GNDDKQNSDAKSVVELTNGTS-------EDGQENINDDAP 163
           NG+WLGSRQIRCNWA KGA GN+DK NSDAKSVVELTNGTS       ++G++  ND+AP
Sbjct: 201 NGRWLGSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSGEVIYGIQNGKDKSNDEAP 260

Query: 162 ENNPQYTTVYVGNLGPEVTSVDLHRHFHSLNAGIIEDVRVQRDKGFGFVRFSNH 1
           ENN QYTTVYVGNL PEVTSVDLHRHFH+L AG IEDVRVQRDKGFGFVR+S H
Sbjct: 261 ENNLQYTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTH 314


>ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
           gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative
           [Ricinus communis]
          Length = 422

 Score =  526 bits (1355), Expect = e-147
 Identities = 252/286 (88%), Positives = 269/286 (94%), Gaps = 1/286 (0%)
 Frame = -3

Query: 855 QQSLYHPGLLAPPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVTEPLLQEVFSSTGPLE 676
           QQSLYHPGLLAPPQIEPI SGNLPPGFD +TCRSVYVGNIH QVTEPLLQEVF+STGP+E
Sbjct: 21  QQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVE 80

Query: 675 GCKLIRKEKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASSQREDTSGHFNI 496
            CKLIRKEKSSYGF+ YFDRRSAALAI++LNGRHLFGQPIKVNWAYAS QREDTSGH+NI
Sbjct: 81  SCKLIRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHYNI 140

Query: 495 FVGDLSPEVTDATLFACFSVYASCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINELN 316
           FVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRGFGFVSFR+QQDAQSAIN+L 
Sbjct: 141 FVGDLSPEVTDATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 200

Query: 315 GKWLGSRQIRCNWAAKGA-GNDDKQNSDAKSVVELTNGTSEDGQENINDDAPENNPQYTT 139
           GKWLGSRQIRCNWA KGA  NDDKQ+SDAKSVVELTNG+SE+G+E  N+DAPENNPQYTT
Sbjct: 201 GKWLGSRQIRCNWATKGATSNDDKQSSDAKSVVELTNGSSEEGKETANNDAPENNPQYTT 260

Query: 138 VYVGNLGPEVTSVDLHRHFHSLNAGIIEDVRVQRDKGFGFVRFSNH 1
           VYVGNL PEVT +DLHRHFHSL AG+IE+VRVQRDKGFGFVRFS H
Sbjct: 261 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRFSTH 306


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