BLASTX nr result

ID: Panax21_contig00001636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001636
         (1717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Popu...    95   5e-17
ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-...    89   4e-15
ref|XP_002523181.1| conserved hypothetical protein [Ricinus comm...    85   7e-14
ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Popu...    84   9e-14
emb|CBI31031.3| unnamed protein product [Vitis vinifera]               82   6e-13

>ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Populus trichocarpa]
           gi|222872110|gb|EEF09241.1| hypothetical protein
           POPTRDRAFT_270173 [Populus trichocarpa]
          Length = 916

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
 Frame = -1

Query: 355 PTDVYKLSREAILAAELPVLFTT*SNWKGPYPRDILFTICHQHRLSEPVFSTVNIRLKMS 176
           P+  YKLSREAILAAELP +FTT +NW+G +PR+ILF  CHQHRLSEP+FST ++ LK S
Sbjct: 345 PSGNYKLSREAILAAELPSVFTTKANWRGSFPREILFAFCHQHRLSEPIFSTTSVPLKAS 404

Query: 175 -ELCGSYKKGSVHILSTICREMA 110
            EL  S KK  V  ++ +  E A
Sbjct: 405 CELLRSQKKLKVTEVAGLATEYA 427


>ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-like [Vitis vinifera]
          Length = 948

 Score = 89.0 bits (219), Expect = 4e-15
 Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
 Frame = -1

Query: 355 PTDVYKLSREAILAAELPVLFTT*SNWKGPYPRDILFTICHQHRLSEPVFSTVNIRLKM- 179
           P+ VYKLSREAIL AELP+ FTT +NWKG +PRD+L + C QHRLSEPVFS ++  LK  
Sbjct: 358 PSGVYKLSREAILTAELPMAFTTRANWKGSFPRDLLCSFCRQHRLSEPVFSMLSTPLKQS 417

Query: 178 SELCGSYKK 152
           SE+ GS K+
Sbjct: 418 SEVSGSCKR 426


>ref|XP_002523181.1| conserved hypothetical protein [Ricinus communis]
           gi|223537588|gb|EEF39212.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 970

 Score = 84.7 bits (208), Expect = 7e-14
 Identities = 40/60 (66%), Positives = 49/60 (81%)
 Frame = -1

Query: 355 PTDVYKLSREAILAAELPVLFTT*SNWKGPYPRDILFTICHQHRLSEPVFSTVNIRLKMS 176
           P+  YKLSREAIL AELP +FTT SNW+G +PR+IL + C QHRLSEPVFS+V++ LK S
Sbjct: 379 PSGNYKLSREAILTAELPSVFTTKSNWRGSFPREILCSFCRQHRLSEPVFSSVSLPLKAS 438


>ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Populus trichocarpa]
           gi|222847823|gb|EEE85370.1| hypothetical protein
           POPTRDRAFT_177484 [Populus trichocarpa]
          Length = 926

 Score = 84.3 bits (207), Expect = 9e-14
 Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = -1

Query: 355 PTDVYKLSREAILAAELPVLFTT*SNWKGPYPRDILFTICHQHRLSEPVFSTVNIRLKMS 176
           P+  YKLSREAI AAELP +FTT +NW+G +PR+IL T C QH+LSEP+FST +I LK S
Sbjct: 357 PSGNYKLSREAIFAAELPSVFTTKTNWRGSFPREILCTFCRQHQLSEPIFSTTSIPLKAS 416

Query: 175 -ELCGSYKK 152
            +L  S KK
Sbjct: 417 CKLPRSQKK 425


>emb|CBI31031.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score = 81.6 bits (200), Expect = 6e-13
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -1

Query: 355 PTDVYKLSREAILAAELPVLFTT*SNWKGPYPRDILFTICHQHRLSEPVFS 203
           P+ VYKLSREAIL AELP+ FTT +NWKG +PRD+L + C QHRLSEPVFS
Sbjct: 358 PSGVYKLSREAILTAELPMAFTTRANWKGSFPRDLLCSFCRQHRLSEPVFS 408


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