BLASTX nr result

ID: Panax21_contig00001621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001621
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-...   424   e-116
ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-...   424   e-116
emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera]   424   e-116
gb|AFW15815.1| eukaryotic translation initiation factor iso4G [S...   408   e-111
ref|XP_002324526.1| predicted protein [Populus trichocarpa] gi|2...   398   e-109

>ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
            isoform 2 [Vitis vinifera]
          Length = 795

 Score =  424 bits (1089), Expect = e-116
 Identities = 216/316 (68%), Positives = 248/316 (78%), Gaps = 5/316 (1%)
 Frame = -3

Query: 937  MTAPEQDLERRDKDRMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNRTCPDE 758
            MTAPEQ+LERRDK+RM+KLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLG DN++CPDE
Sbjct: 316  MTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDE 375

Query: 757  ENVEAICQFFNTIGKQLDESQKSRRINDVYFTRLKELSTNAQLAPRMRFLVRDVIDLRSN 578
            ENVEAICQFFNTIGKQLDES KSRRIND+YF+RLKEL+TN QLAPR+RF+VRDV+DLR+N
Sbjct: 376  ENVEAICQFFNTIGKQLDESTKSRRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRAN 435

Query: 577  SWVPRREEVKAKTITEIHNEAEKNMKLRPGTTASIRNSRAMTSAAQGSISPGGFPINXXX 398
            SWVPRREEVKAKTITEIH EAEKN+ LRPG TASIRNSR + S AQG++ PGGFPI    
Sbjct: 436  SWVPRREEVKAKTITEIHTEAEKNLGLRPGATASIRNSRNIVSGAQGTMGPGGFPITRPG 495

Query: 397  XXXXXXXXXXXXXXXXXXGIDNDNWEVTRSRSMPRNDPNQL-----SGYVQPPLIGKSPA 233
                              GIDNDNWEV R+R+MPR D + +       +VQ PL+GKS  
Sbjct: 496  SGGMMPGMPGTRKMPGMPGIDNDNWEVPRTRAMPRGDGSGVQTRVQQTHVQSPLMGKSMP 555

Query: 232  LNQRLLPQGSSGLISGRSSALLQGSGAPPLRPPNFGFSAEPASQVRSPSRLVPTASVLPV 53
            LN RLLPQGS+G ISGR+SALLQGSG PP R  NFG   EPA Q   P++ VP AS++P 
Sbjct: 556  LNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVASIVPA 615

Query: 52   VAKQMAPAVRLSPEEL 5
              K + PA RL+ ++L
Sbjct: 616  AEKPVTPAARLNSDDL 631


>ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
            isoform 1 [Vitis vinifera]
          Length = 794

 Score =  424 bits (1089), Expect = e-116
 Identities = 216/316 (68%), Positives = 248/316 (78%), Gaps = 5/316 (1%)
 Frame = -3

Query: 937  MTAPEQDLERRDKDRMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNRTCPDE 758
            MTAPEQ+LERRDK+RM+KLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLG DN++CPDE
Sbjct: 315  MTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDE 374

Query: 757  ENVEAICQFFNTIGKQLDESQKSRRINDVYFTRLKELSTNAQLAPRMRFLVRDVIDLRSN 578
            ENVEAICQFFNTIGKQLDES KSRRIND+YF+RLKEL+TN QLAPR+RF+VRDV+DLR+N
Sbjct: 375  ENVEAICQFFNTIGKQLDESTKSRRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRAN 434

Query: 577  SWVPRREEVKAKTITEIHNEAEKNMKLRPGTTASIRNSRAMTSAAQGSISPGGFPINXXX 398
            SWVPRREEVKAKTITEIH EAEKN+ LRPG TASIRNSR + S AQG++ PGGFPI    
Sbjct: 435  SWVPRREEVKAKTITEIHTEAEKNLGLRPGATASIRNSRNIVSGAQGTMGPGGFPITRPG 494

Query: 397  XXXXXXXXXXXXXXXXXXGIDNDNWEVTRSRSMPRNDPNQL-----SGYVQPPLIGKSPA 233
                              GIDNDNWEV R+R+MPR D + +       +VQ PL+GKS  
Sbjct: 495  SGGMMPGMPGTRKMPGMPGIDNDNWEVPRTRAMPRGDGSGVQTRVQQTHVQSPLMGKSMP 554

Query: 232  LNQRLLPQGSSGLISGRSSALLQGSGAPPLRPPNFGFSAEPASQVRSPSRLVPTASVLPV 53
            LN RLLPQGS+G ISGR+SALLQGSG PP R  NFG   EPA Q   P++ VP AS++P 
Sbjct: 555  LNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVASIVPA 614

Query: 52   VAKQMAPAVRLSPEEL 5
              K + PA RL+ ++L
Sbjct: 615  AEKPVTPAARLNSDDL 630


>emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera]
          Length = 794

 Score =  424 bits (1089), Expect = e-116
 Identities = 216/316 (68%), Positives = 248/316 (78%), Gaps = 5/316 (1%)
 Frame = -3

Query: 937  MTAPEQDLERRDKDRMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNRTCPDE 758
            MTAPEQ+LERRDK+RM+KLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLG DN++CPDE
Sbjct: 315  MTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDE 374

Query: 757  ENVEAICQFFNTIGKQLDESQKSRRINDVYFTRLKELSTNAQLAPRMRFLVRDVIDLRSN 578
            ENVEAICQFFNTIGKQLDES KSRRIND+YF+RLKEL+TN QLAPR+RF+VRDV+DLR+N
Sbjct: 375  ENVEAICQFFNTIGKQLDESTKSRRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRAN 434

Query: 577  SWVPRREEVKAKTITEIHNEAEKNMKLRPGTTASIRNSRAMTSAAQGSISPGGFPINXXX 398
            SWVPRREEVKAKTITEIH EAEKN+ LRPG TASIRNSR + S AQG++ PGGFPI    
Sbjct: 435  SWVPRREEVKAKTITEIHTEAEKNLGLRPGATASIRNSRNIVSGAQGTMGPGGFPITRPG 494

Query: 397  XXXXXXXXXXXXXXXXXXGIDNDNWEVTRSRSMPRNDPNQL-----SGYVQPPLIGKSPA 233
                              GIDNDNWEV R+R+MPR D + +       +VQ PL+GKS  
Sbjct: 495  SGGMMPGMPGTRKMPGMPGIDNDNWEVPRTRAMPRGDGSGVQTRVQQTHVQSPLMGKSMP 554

Query: 232  LNQRLLPQGSSGLISGRSSALLQGSGAPPLRPPNFGFSAEPASQVRSPSRLVPTASVLPV 53
            LN RLLPQGS+G ISGR+SALLQGSG PP R  NFG   EPA Q   P++ VP AS++P 
Sbjct: 555  LNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVASIVPA 614

Query: 52   VAKQMAPAVRLSPEEL 5
              K + PA RL+ ++L
Sbjct: 615  AEKPVTPAARLNSDDL 630


>gb|AFW15815.1| eukaryotic translation initiation factor iso4G [Solanum lycopersicum]
          Length = 775

 Score =  408 bits (1048), Expect = e-111
 Identities = 217/313 (69%), Positives = 244/313 (77%), Gaps = 2/313 (0%)
 Frame = -3

Query: 937  MTAPEQDLERRDKDRMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNRTCPDE 758
            MTA +Q+ ER+DK+R+IKLRTLGNI+LIGELLKQKMVPEKIVHHIVQELLG D ++C +E
Sbjct: 305  MTALDQESERKDKERLIKLRTLGNIKLIGELLKQKMVPEKIVHHIVQELLGQDPKSCTEE 364

Query: 757  ENVEAICQFFNTIGKQLDESQKSRRINDVYFTRLKELSTNAQLAPRMRFLVRDVIDLRSN 578
            ENVEAICQFFNTIGKQLDE+QKSRRI D+YF RLKELSTN QLAPR+RF+VR+V+DLRSN
Sbjct: 365  ENVEAICQFFNTIGKQLDENQKSRRIIDMYFNRLKELSTNPQLAPRLRFMVRNVLDLRSN 424

Query: 577  SWVPRREEVKAKTITEIHNEAEKNMKLRPGTTASIRNSRAMTSAAQGSISPGGFPINXXX 398
            SWVPRREEVKAKTITEIH+EAEK + LRPG TAS+RNSR     AQGS+SPGGFPIN   
Sbjct: 425  SWVPRREEVKAKTITEIHSEAEKTLGLRPGATASMRNSRG--PPAQGSLSPGGFPINRPG 482

Query: 397  XXXXXXXXXXXXXXXXXXGIDNDNWEVTRSRSMPR-NDP-NQLSGYVQPPLIGKSPALNQ 224
                              G+DNDNWEV RSRSMPR N P  Q  G  QPPL+GKSPALN 
Sbjct: 483  TGGMMPGMPGTRKMPGTPGMDNDNWEVPRSRSMPRGNGPLVQAGGRSQPPLVGKSPALNP 542

Query: 223  RLLPQGSSGLISGRSSALLQGSGAPPLRPPNFGFSAEPASQVRSPSRLVPTASVLPVVAK 44
            RLLPQGS G +SGR SALLQGSGAPP RP  +GF  +PA+QVR      PT  V PVVAK
Sbjct: 543  RLLPQGSGGYVSGRPSALLQGSGAPPARPTGYGFGMDPAAQVRP-----PTTVVSPVVAK 597

Query: 43   QMAPAVRLSPEEL 5
              APA  L+P+ L
Sbjct: 598  PQAPAASLTPDVL 610


>ref|XP_002324526.1| predicted protein [Populus trichocarpa] gi|222865960|gb|EEF03091.1|
            predicted protein [Populus trichocarpa]
          Length = 793

 Score =  398 bits (1023), Expect = e-109
 Identities = 204/312 (65%), Positives = 238/312 (76%), Gaps = 1/312 (0%)
 Frame = -3

Query: 937  MTAPEQDLERRDKDRMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNRTCPDE 758
            MTAPEQ+LERRDK++++KLRTLGN+RLIGELLKQ MVPEKIVHHIVQELLGPDN+ CP E
Sbjct: 319  MTAPEQELERRDKEKLVKLRTLGNMRLIGELLKQSMVPEKIVHHIVQELLGPDNKGCPAE 378

Query: 757  ENVEAICQFFNTIGKQLDESQKSRRINDVYFTRLKELSTNAQLAPRMRFLVRDVIDLRSN 578
            E+VEAICQFFNTIGKQLDES KSRRINDVYF RLKEL++N QLAPR++F+VR V+DLR N
Sbjct: 379  ESVEAICQFFNTIGKQLDESPKSRRINDVYFGRLKELASNPQLAPRLKFMVRGVLDLRMN 438

Query: 577  SWVPRREEVKAKTITEIHNEAEKNMKLRPGTTASIRNSRAMTSAAQGSISPGGFPINXXX 398
            +W+PRREEVKAKTITEIH+EAEK + LRPG TASIRN+R + S A G+  PGGFPIN   
Sbjct: 439  NWIPRREEVKAKTITEIHSEAEKTLGLRPGATASIRNNRGLISTAPGTTGPGGFPINRPG 498

Query: 397  XXXXXXXXXXXXXXXXXXGIDNDNWEVTRSRSMPRND-PNQLSGYVQPPLIGKSPALNQR 221
                              GIDNDN E+ R+R MPR D P QL G VQ P+  KS +LN R
Sbjct: 499  TGGMMPGMPGTRRMPGMPGIDNDNREIPRNRPMPRGDGPMQLGGRVQSPMFNKS-SLNTR 557

Query: 220  LLPQGSSGLISGRSSALLQGSGAPPLRPPNFGFSAEPASQVRSPSRLVPTASVLPVVAKQ 41
            LLP+GS G I GRSSALL GSG PP RP N GF AEP +Q   PS+ +P  SV PV  + 
Sbjct: 558  LLPEGSGGFIGGRSSALLHGSGGPPSRPSNSGFGAEPPAQASLPSKTLPAPSVPPVSERP 617

Query: 40   MAPAVRLSPEEL 5
            +  A R++P+EL
Sbjct: 618  VVSAARVNPDEL 629


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