BLASTX nr result

ID: Panax21_contig00001618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001618
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23573.3| unnamed protein product [Vitis vinifera]              268   8e-70
gb|AFW71933.1| histone H3, partial [Zea mays]                         267   1e-69
gb|AFW86017.1| histone H3 [Zea mays]                                  266   2e-69
gb|AFW86016.1| histone H3 [Zea mays]                                  266   2e-69
ref|NP_001078516.1| histone H3 [Arabidopsis thaliana] gi|3326617...   266   2e-69

>emb|CBI23573.3| unnamed protein product [Vitis vinifera]
          Length = 147

 Score =  268 bits (684), Expect = 8e-70
 Identities = 137/137 (100%), Positives = 137/137 (100%)
 Frame = -3

Query: 514 EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 335
           EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST
Sbjct: 11  EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 70

Query: 334 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 155
           ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 71  ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 130

Query: 154 IMPKDIQLARRIRGERA 104
           IMPKDIQLARRIRGERA
Sbjct: 131 IMPKDIQLARRIRGERA 147


>gb|AFW71933.1| histone H3, partial [Zea mays]
          Length = 171

 Score =  267 bits (682), Expect = 1e-69
 Identities = 139/153 (90%), Positives = 142/153 (92%)
 Frame = -3

Query: 511 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 332
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 331 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 152
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 151 MPKDIQLARRIRGERA*MLIVACSLGFYSCTSY 53
           MPKDIQLARRIRGER      AC     SC+++
Sbjct: 121 MPKDIQLARRIRGER------ACIRASLSCSNF 147


>gb|AFW86017.1| histone H3 [Zea mays]
          Length = 227

 Score =  266 bits (680), Expect = 2e-69
 Identities = 136/137 (99%), Positives = 137/137 (100%)
 Frame = -3

Query: 514 EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 335
           +MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST
Sbjct: 91  KMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 150

Query: 334 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 155
           ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 151 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 210

Query: 154 IMPKDIQLARRIRGERA 104
           IMPKDIQLARRIRGERA
Sbjct: 211 IMPKDIQLARRIRGERA 227


>gb|AFW86016.1| histone H3 [Zea mays]
          Length = 247

 Score =  266 bits (680), Expect = 2e-69
 Identities = 136/137 (99%), Positives = 137/137 (100%)
 Frame = -3

Query: 514 EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 335
           +MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST
Sbjct: 111 KMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 170

Query: 334 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 155
           ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 171 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 230

Query: 154 IMPKDIQLARRIRGERA 104
           IMPKDIQLARRIRGERA
Sbjct: 231 IMPKDIQLARRIRGERA 247


>ref|NP_001078516.1| histone H3 [Arabidopsis thaliana] gi|332661756|gb|AEE87156.1|
           histone H3 [Arabidopsis thaliana]
          Length = 164

 Score =  266 bits (680), Expect = 2e-69
 Identities = 136/137 (99%), Positives = 137/137 (100%)
 Frame = -3

Query: 514 EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 335
           +MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST
Sbjct: 28  KMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 87

Query: 334 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 155
           ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 88  ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 147

Query: 154 IMPKDIQLARRIRGERA 104
           IMPKDIQLARRIRGERA
Sbjct: 148 IMPKDIQLARRIRGERA 164


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