BLASTX nr result

ID: Panax21_contig00001604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001604
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274948.1| PREDICTED: zinc finger CCCH domain-containin...   345   2e-92
ref|XP_002328049.1| predicted protein [Populus trichocarpa] gi|2...   333   4e-89
ref|XP_003540372.1| PREDICTED: zinc finger CCCH domain-containin...   330   5e-88
ref|XP_002309749.1| predicted protein [Populus trichocarpa] gi|2...   327   4e-87
ref|XP_003541902.1| PREDICTED: zinc finger CCCH domain-containin...   320   4e-85

>ref|XP_002274948.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like [Vitis
            vinifera]
          Length = 360

 Score =  345 bits (884), Expect = 2e-92
 Identities = 209/383 (54%), Positives = 244/383 (63%), Gaps = 19/383 (4%)
 Frame = +1

Query: 22   VCADQQHKFHPCHQLFLSKKTLRQIDIPPRKLLSRRS-SADAADMFLDSPRS---ADETL 189
            V ADQ HKF   HQLF +KKT   IDIPPRKLLSRR+ S +++D+F DSP++   A ETL
Sbjct: 4    VSADQ-HKFFLSHQLF-NKKT---IDIPPRKLLSRRANSLESSDIFSDSPKALGAAGETL 58

Query: 190  LQKSLPHNNCFXXXXXXPYSSDHFRIYEFKVRRCSRSRSHDWTDCPFAHPGEKARRRDPR 369
             QK LP N C       PYSSDHFR++EFKVRRC+RSRSHDWTDCPFAHPGEKARRRDPR
Sbjct: 59   FQKFLPFN-CGDDDESDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPR 117

Query: 370  KYHYSGTVCAEFRRGGCSRGDNCEFAHGVFECWLHPARYRTEACKDGENCKRKICFFAHT 549
            +YHYSGTVC+E+RRGGCSRGDNCEF+HGVFECWLHPARYRTEACKDG+NCKRK+CFFAH+
Sbjct: 118  RYHYSGTVCSEYRRGGCSRGDNCEFSHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHS 177

Query: 550  PKQLRVLPSHCNDDYQSPVTADSKYQRNNGQHCCGYGQYCVTA-SPTSTLIGXXXXXXXX 726
             KQLRVLP H     Q+  T D K+   N  HCC    +C +A SPTSTL+G        
Sbjct: 178  RKQLRVLPLHS----QTNGTPDVKFSPLN--HCC---VFCHSATSPTSTLMGTSHFSPPA 228

Query: 727  XXXXXXXXXXXKSWQMGGISAISRFGDRLGCVELNQ-------VLSY-KDAXXXXXXXXX 882
                        S      S ISR+ DR   ++ +        +LSY KD          
Sbjct: 229  SPSPPL------SPVNATYSPISRYNDRSTSLDSSNMSQFRHVMLSYNKDVVAELMSSLE 282

Query: 883  XXXXXXNSPHGGENNREMAWIDVSHFNGDDQQQFILSPSTPIPSGAGHFFSRDCSSVG-- 1056
                   SP   E+   +  +D S F  +D QQF LSPS P  SG+ HFF+ DCSS    
Sbjct: 283  AININEASP---EHTNPL--VD-SCFASEDHQQFSLSPSIPNASGSRHFFNGDCSSKSSI 336

Query: 1057 ---FTDENGLGG-PDLGWVNDLL 1113
                + ENG    PDLGWVNDLL
Sbjct: 337  EDKLSSENGSWACPDLGWVNDLL 359


>ref|XP_002328049.1| predicted protein [Populus trichocarpa] gi|222837458|gb|EEE75837.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  333 bits (855), Expect = 4e-89
 Identities = 190/396 (47%), Positives = 238/396 (60%), Gaps = 31/396 (7%)
 Frame = +1

Query: 19   TVCADQQHKFHPCHQLFLSKKTLRQIDIPPRKLLSRRSSADAADMFLDSPRSADETLLQK 198
            T+CA+Q HK +  HQL   K+  R ++I P KLL++++  +  DM      S  ET LQ+
Sbjct: 3    TICAEQ-HKPYTPHQLLSPKRPFRDLEILPGKLLTKKTHQETLDM------SPYETNLQR 55

Query: 199  SLPHNNC----FXXXXXXPYSSDHFRIYEFKVRRCSRSRSHDWTDCPFAHPGEKARRRDP 366
             LP+N+            PYSSDHFR+YEFKVRRC+RSRSHDWTDCPFAHPGEKARRRDP
Sbjct: 56   FLPYNDYSNEKVLDGELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDP 115

Query: 367  RKYHYSGTVCAEFRRGGCSRGDNCEFAHGVFECWLHPARYRTEACKDGENCKRKICFFAH 546
            R++HYSG VC EF+RGGCSRG+NCEF+HGVFECWLHP+RYRTEACKDG+NCKRK+CFFAH
Sbjct: 116  RRFHYSGIVCPEFKRGGCSRGENCEFSHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAH 175

Query: 547  TPKQLRVLP--SHCNDDYQSPVTADSKYQRNNGQHCCGYGQYCVTASPTSTLIGXXXXXX 720
            +P+QLR+LP  S  N    SP ++       N  HCC    + +T+SPTSTL+G      
Sbjct: 176  SPRQLRILPEVSSRNKSLASPCSS------LNHSHCC-VVCHSMTSSPTSTLLGMSHMSP 228

Query: 721  XXXXXXXXXXXXXKSWQMGGISAISRFGD-----RLGCVE----LNQVLSYKDAXXXXXX 873
                         K   + G S ISR+ +     R G V     L++++S  +A      
Sbjct: 229  PLSPSLSPPLSPVKHQSLSGFSPISRYNETLSKFRAGVVSYKDVLSELMSSLEAMNFNEG 288

Query: 874  XXXXXXXXXNSPHGGENNREMAW-IDVSHFNGDDQQQFILSPSTPIPSGAGHFFSRDCSS 1050
                     ++ H    N    W IDVS F+G+DQ QFILSPSTP PS    FF+ DCSS
Sbjct: 289  ASVSSPMSLSTNHNRNVNSTTPWNIDVS-FSGEDQPQFILSPSTPTPS--SKFFNGDCSS 345

Query: 1051 -------VGFTDENGLG--------GPDLGWVNDLL 1113
                       D N +G         PDLGWVN+LL
Sbjct: 346  NKGLFVDDKINDHNNIGDGGLACTSDPDLGWVNELL 381


>ref|XP_003540372.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like [Glycine
            max]
          Length = 392

 Score =  330 bits (846), Expect = 5e-88
 Identities = 193/403 (47%), Positives = 230/403 (57%), Gaps = 38/403 (9%)
 Frame = +1

Query: 19   TVCADQQHKFHPCHQLFLSKKTLRQIDIPPRKLLSRRSSA--DAADMFLDSPRSADETLL 192
            +VCA +QHKF+P HQL   KKTLR+IDIPPRKLL+RR++A     D++     S++ET+L
Sbjct: 3    SVCA-KQHKFYPSHQLLSPKKTLREIDIPPRKLLTRRAAACVGGTDVY-----SSEETML 56

Query: 193  QKSLPHNNCFXXXXXXPYSSDHFRIYEFKVRRCSRSRSHDWTDCPFAHPGEKARRRDPRK 372
            QK LP N+        PYSSDHFR++EFKVRRC+RSRSHDWTDCPFAHPGEKARRRDPR+
Sbjct: 57   QKFLPSNDS---DEDDPYSSDHFRMFEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRR 113

Query: 373  YHYSGTVCAEFRRGGCSRGDNCEFAHGVFECWLHPARYRTEACKDGENCKRKICFFAHTP 552
            YHYSGTVC E+ RGGCSRGD CE+AHGVFECWLHP+RYRTEACKDG NCKRK+CFFAHTP
Sbjct: 114  YHYSGTVCPEYPRGGCSRGDACEYAHGVFECWLHPSRYRTEACKDGRNCKRKVCFFAHTP 173

Query: 553  KQLRVLP----------SHCNDDYQSPVTADSKYQRNNGQHCCGYGQYC---VTASPTST 693
            +QLR+LP            C  +    +   SK   NN  +CC +  +C    + SPTST
Sbjct: 174  RQLRILPVTTSSPSSNDMPCKKNLNKLLNHASKSNNNNNNNCCLF-CHCGASSSVSPTST 232

Query: 694  LIGXXXXXXXXXXXXXXXXXXXKSWQMGGISAISRFGDRLGCVELNQ---VLSYKDAXXX 864
            L G                          +S IS    R   V +N    V+SYKD    
Sbjct: 233  LFGMSHFSPPVSPSSSSSPPPSPLKPRSVVSPISPI-SRYSAVNMNPHHGVVSYKDMFAE 291

Query: 865  XXXXXXXXXXXXNSPHGGENNREMAWID--------------VSHFNGDDQQ-QFILS-P 996
                         SP  G       W+D              VS F  +D+Q QFI S P
Sbjct: 292  LVNSLEGLSFNEGSPVSGAKAPNFPWLDVSLEEQQQQQNPFIVSSFGCEDKQNQFIFSPP 351

Query: 997  STPIPSGA----GHFFSRDCSSVGFTDENGLGGPDLGWVNDLL 1113
            S   P+        F   D   VG  D N   GPDL WVN+LL
Sbjct: 352  SIQTPTNGKFCRNRFMGNDNKVVGGADVN---GPDLAWVNELL 391


>ref|XP_002309749.1| predicted protein [Populus trichocarpa] gi|222852652|gb|EEE90199.1|
            predicted protein [Populus trichocarpa]
          Length = 383

 Score =  327 bits (838), Expect = 4e-87
 Identities = 189/395 (47%), Positives = 233/395 (58%), Gaps = 29/395 (7%)
 Frame = +1

Query: 16   GTVCADQQHKFHPCHQLFLSKKTL-RQIDIPPRKLLSRRSSADAADMFLDSPRSADETLL 192
            GT+ A+Q HK  P HQ+    K L R ++IPPRKLL+R++  +  D+      S  ET L
Sbjct: 2    GTISAEQ-HKLFPSHQILSPHKPLIRDLEIPPRKLLTRKTHQETLDV------SPYETDL 54

Query: 193  QKSLPHNNCFXXXXXX----PYSSDHFRIYEFKVRRCSRSRSHDWTDCPFAHPGEKARRR 360
            Q+ LP+N+            PYSSDHFR+YEFKVRRC+RSRSHDWTDCPFAHPGEKARRR
Sbjct: 55   QEFLPYNDSNNEIDIDDELDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRR 114

Query: 361  DPRKYHYSGTVCAEFRRGGCSRGDNCEFAHGVFECWLHPARYRTEACKDGENCKRKICFF 540
            D R++HYSG VC EF RGGC+RGDNCEFAHGVFECWLHP RYRTEACKDG+NCKRK+CFF
Sbjct: 115  DLRRFHYSGAVCPEFIRGGCNRGDNCEFAHGVFECWLHPFRYRTEACKDGKNCKRKVCFF 174

Query: 541  AHTPKQLRVLPSHCNDDYQSPVTADSKYQRNNGQHCCGYGQYCVTASPTSTLIGXXXXXX 720
            AH+P+QLR+LP   +    +     S     N  HCC    + +T+SPTSTL+G      
Sbjct: 175  AHSPRQLRILPEGSS---HNKTLGSSPCSSLNHGHCCCAVCHSMTSSPTSTLLGMSPLSP 231

Query: 721  XXXXXXXXXXXXXKSWQMGGISAISRFGDRLGCVELNQVLSYKDA----XXXXXXXXXXX 888
                         K   +   S ISR+ + L       V+SYKD                
Sbjct: 232  PLSPSLTPSLSPVKHQSLSRFSPISRYSETLSKFRAG-VVSYKDVFTELMSSLEAMNFNE 290

Query: 889  XXXXNSP------HGGENNREMAWIDVSHFNGDDQQQFILSPSTPIPSGAGHFFSRDCSS 1050
                +SP      H    N     IDVS F+G+D+ QFILSPSTP PS +  FF+RDCSS
Sbjct: 291  AAGVSSPMSLYPNHKRNVNNTPRNIDVS-FDGEDEPQFILSPSTPTPSSS--FFNRDCSS 347

Query: 1051 --------VGFTDENGLGG------PDLGWVNDLL 1113
                    +   +++  GG      PDLGWVN+LL
Sbjct: 348  NKGLFIDDIHKINDHNNGGLACTPDPDLGWVNELL 382


>ref|XP_003541902.1| PREDICTED: zinc finger CCCH domain-containing protein 2-like [Glycine
            max]
          Length = 391

 Score =  320 bits (821), Expect = 4e-85
 Identities = 191/407 (46%), Positives = 232/407 (57%), Gaps = 43/407 (10%)
 Frame = +1

Query: 22   VCADQQHKFHPCHQLFLSKKTLRQIDIPPRKLLSRRSS--ADAADMFLDSPRSADETLLQ 195
            VCA+Q HKF+P HQL   KKTLR+IDIPPRKLL+RR++      D++      ++ET+ Q
Sbjct: 4    VCAEQ-HKFYPSHQLLSPKKTLREIDIPPRKLLTRRAAKCVGGTDVY------SEETMQQ 56

Query: 196  KSLPHNNCFXXXXXXPYSSDHFRIYEFKVRRCSRSRSHDWTDCPFAHPGEKARRRDPRKY 375
            K LP N+        PYSSDHFR++EFKVR+C+RSRSHDWTDCPFAHPGEKARRRDPR+Y
Sbjct: 57   KFLPSNDS---DEDDPYSSDHFRMFEFKVRQCTRSRSHDWTDCPFAHPGEKARRRDPRRY 113

Query: 376  HYSGTVCAEFRRGGCSRGDNCEFAHGVFECWLHPARYRTEACKDGENCKRKICFFAHTPK 555
            HYSGTVC E+RRGGCSR D CE+AHGVFECWLHP+RYRTEACKDG NCKRK+CFFAHTP+
Sbjct: 114  HYSGTVCPEYRRGGCSRDDACEYAHGVFECWLHPSRYRTEACKDGRNCKRKVCFFAHTPR 173

Query: 556  QLRVLP---------SHCNDDYQSPVTADSKYQRNNGQHCCGYGQYC---VTASPTSTLI 699
            QLR+LP           C  + +  +   SK   NN  +CC +  +C    +ASPTSTL 
Sbjct: 174  QLRILPVTSSPSSNDMPCKKNLKQVLNHASK--TNNNNNCCLF-CHCGASSSASPTSTLF 230

Query: 700  GXXXXXXXXXXXXXXXXXXXKSWQMGGISAISRFGDRLGCVELN--QVLSYKDAXXXXXX 873
            G                          +S ISR+      V +N   V+SYKD       
Sbjct: 231  GMSHFSPPLSPSSSSSPPPSPLKPRNAVSPISRY----SAVNVNPHHVVSYKDVFTELVN 286

Query: 874  XXXXXXXXXNSPHGGENNREMAWIDVS-----------------HFNGDDQQ---QFILS 993
                      SP  G       W+DVS                  F  +DQQ   QFI S
Sbjct: 287  SLERLSFNEGSPVSGAKAPNFPWLDVSLNCEEQQQQQQNPFIVPSFGCEDQQQQNQFIFS 346

Query: 994  -PSTPIPSG----AGHFFSRDCSS--VGFTDENGLGGPDLGWVNDLL 1113
             PS   P+     +  F   D ++  VG  D N   GPDL WVN+LL
Sbjct: 347  PPSIQTPTNGKFCSNRFMGNDNNNKVVGGADVN---GPDLAWVNELL 390


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