BLASTX nr result

ID: Panax21_contig00001588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001588
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog...   214   1e-53
ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog...   213   3e-53
ref|XP_003633386.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore ...   211   1e-52
emb|CAN66776.1| hypothetical protein VITISV_035303 [Vitis vinifera]   210   3e-52
ref|XP_003633385.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore ...   205   7e-51

>ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  214 bits (546), Expect = 1e-53
 Identities = 117/220 (53%), Positives = 132/220 (60%)
 Frame = +1

Query: 1   DAVENEDNRFLEKLQKERDLMEENVNGLVRNVKELEGKLERLKTEPSAXXXXXXXXXXXX 180
           D +E  D  F+ KL++ERD + E V  L + V E EG+LE L+  PSA            
Sbjct: 188 DGMEAVDREFMGKLERERDAVAEGVKALEKEVAEREGRLEELRLGPSAKEVVEKERGVLE 247

Query: 181 XXXXXFHTMIEQLDGHIVNXXXXXXXXXXXXXXXXXXRKRICXXXXXXXXXXXXQAFNAR 360
                FH +I +  G I +                    RIC            Q FNAR
Sbjct: 248 EDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEENEELKKRVELQTFNAR 307

Query: 361 DAERMKRELQAVERDIGEAEAARNTWEEKSWDLDGRIGKKFKELQNLMIECNQAIRKLKL 540
           DAERMKRELQAVERDI EAE ARN WEEKSWDLD  IG KFKEL+ L IECNQA+R+LKL
Sbjct: 308 DAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKELEALSIECNQALRRLKL 367

Query: 541 GNSFQYELNAKGSNPAEVLGKDYKSTLKPALASFADDIKK 660
           GN  QY LNAKGS+PAEVLG DYKSTLKPAL SFADDI K
Sbjct: 368 GNGLQYVLNAKGSSPAEVLGIDYKSTLKPALDSFADDINK 407


>ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  213 bits (542), Expect = 3e-53
 Identities = 116/220 (52%), Positives = 131/220 (59%)
 Frame = +1

Query: 1   DAVENEDNRFLEKLQKERDLMEENVNGLVRNVKELEGKLERLKTEPSAXXXXXXXXXXXX 180
           D +E  D  F+ KL+KERD + E V  L + V E EG+LE L++ PSA            
Sbjct: 188 DGMEAVDREFMGKLEKERDAVAEGVKALEKEVAEREGRLEELRSGPSAKEVVEKVRGVLE 247

Query: 181 XXXXXFHTMIEQLDGHIVNXXXXXXXXXXXXXXXXXXRKRICXXXXXXXXXXXXQAFNAR 360
                FH +I +  G I +                    RIC            Q FNAR
Sbjct: 248 EDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEENEELKKRVELQTFNAR 307

Query: 361 DAERMKRELQAVERDIGEAEAARNTWEEKSWDLDGRIGKKFKELQNLMIECNQAIRKLKL 540
           DAERMKRELQAVERDI EAE ARN WEEKSWDLD  IG KFKEL+ L IECNQA+R+LKL
Sbjct: 308 DAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKELEALSIECNQALRRLKL 367

Query: 541 GNSFQYELNAKGSNPAEVLGKDYKSTLKPALASFADDIKK 660
           GN  QY LNAKGS+P EVLG DYKS LKPAL SFADDI K
Sbjct: 368 GNGLQYVLNAKGSSPTEVLGIDYKSALKPALDSFADDINK 407


>ref|XP_003633386.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore protein NDC80 homolog
           [Vitis vinifera]
          Length = 627

 Score =  211 bits (537), Expect = 1e-52
 Identities = 115/220 (52%), Positives = 132/220 (60%)
 Frame = +1

Query: 1   DAVENEDNRFLEKLQKERDLMEENVNGLVRNVKELEGKLERLKTEPSAXXXXXXXXXXXX 180
           D +E  D  F+ KL++ERD + + V  L + V E EG+LE L++ PSA            
Sbjct: 234 DGMEAVDREFMGKLERERDAVAKGVKALEKEVAEREGRLEELRSGPSAKEVVEKERGVLE 293

Query: 181 XXXXXFHTMIEQLDGHIVNXXXXXXXXXXXXXXXXXXRKRICXXXXXXXXXXXXQAFNAR 360
                FH +I +  G I +                    RIC            Q FNAR
Sbjct: 294 EDVKKFHAIIAEFSGRIASVEKILDEKEKELGVKVEENNRICEENEELKKRVELQTFNAR 353

Query: 361 DAERMKRELQAVERDIGEAEAARNTWEEKSWDLDGRIGKKFKELQNLMIECNQAIRKLKL 540
           DAERMKRELQAVERDI EAE ARN WEEKSWD+D  IG KFKEL+ L IECNQA+R+LKL
Sbjct: 354 DAERMKRELQAVERDITEAEVARNGWEEKSWDVDTTIGHKFKELEALSIECNQALRRLKL 413

Query: 541 GNSFQYELNAKGSNPAEVLGKDYKSTLKPALASFADDIKK 660
           GN  QY LNAKGS PAEVLG DYKSTLKPAL SFADDI K
Sbjct: 414 GNGLQYVLNAKGSLPAEVLGIDYKSTLKPALDSFADDINK 453


>emb|CAN66776.1| hypothetical protein VITISV_035303 [Vitis vinifera]
          Length = 735

 Score =  210 bits (534), Expect = 3e-52
 Identities = 115/220 (52%), Positives = 130/220 (59%)
 Frame = +1

Query: 1   DAVENEDNRFLEKLQKERDLMEENVNGLVRNVKELEGKLERLKTEPSAXXXXXXXXXXXX 180
           D +E  D  F+ KL+ ERD + E V  L + V E EG+LE L++ PSA            
Sbjct: 188 DGMEAVDREFMGKLEXERDAVAEGVKALEKEVAEREGRLEELRSGPSAKEVVEKERGVLE 247

Query: 181 XXXXXFHTMIEQLDGHIVNXXXXXXXXXXXXXXXXXXRKRICXXXXXXXXXXXXQAFNAR 360
                FH +I +  G I +                    RIC            Q FNAR
Sbjct: 248 EDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEENEELKKRVELQTFNAR 307

Query: 361 DAERMKRELQAVERDIGEAEAARNTWEEKSWDLDGRIGKKFKELQNLMIECNQAIRKLKL 540
           DAERMKRELQAVERDI EAE ARN WEEKSWDLD  IG KFKEL+ L IECNQA+R+LKL
Sbjct: 308 DAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKELEALSIECNQALRRLKL 367

Query: 541 GNSFQYELNAKGSNPAEVLGKDYKSTLKPALASFADDIKK 660
           GN  QY LNAKGS+P EVLG DYKS LKPAL SFADDI K
Sbjct: 368 GNGLQYVLNAKGSSPXEVLGIDYKSXLKPALDSFADDINK 407


>ref|XP_003633385.1| PREDICTED: LOW QUALITY PROTEIN: kinetochore protein ndc80-like
           [Vitis vinifera]
          Length = 552

 Score =  205 bits (522), Expect = 7e-51
 Identities = 113/220 (51%), Positives = 130/220 (59%)
 Frame = +1

Query: 1   DAVENEDNRFLEKLQKERDLMEENVNGLVRNVKELEGKLERLKTEPSAXXXXXXXXXXXX 180
           D +E     F+ KL++ERD + + V  L + V E EG+LE L++ PSA            
Sbjct: 169 DGMEAVGREFMGKLERERDAVAKGVKALEKEVAEREGRLEELRSGPSAKEVVEKERGVLE 228

Query: 181 XXXXXFHTMIEQLDGHIVNXXXXXXXXXXXXXXXXXXRKRICXXXXXXXXXXXXQAFNAR 360
                FH +I +  G I +                    RIC            Q FNAR
Sbjct: 229 EDVKKFHAIIAEFSGRIASVEKILDEKEKELGVKVEENNRICEENEELKKRVELQTFNAR 288

Query: 361 DAERMKRELQAVERDIGEAEAARNTWEEKSWDLDGRIGKKFKELQNLMIECNQAIRKLKL 540
           DAERMKRELQAVERDI EAE ARN WEEKSWD+D  IG KFKEL+ L IECNQA+ +LKL
Sbjct: 289 DAERMKRELQAVERDITEAEVARNGWEEKSWDVDTTIGHKFKELEALSIECNQALWRLKL 348

Query: 541 GNSFQYELNAKGSNPAEVLGKDYKSTLKPALASFADDIKK 660
           GN  QY LNAKGS PAEVLG DYKSTLKPAL SFADDI K
Sbjct: 349 GNGLQYVLNAKGSLPAEVLGIDYKSTLKPALDSFADDINK 388


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