BLASTX nr result
ID: Panax21_contig00001585
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00001585 (436 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s... 70 2e-10 ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|2... 68 7e-10 ref|XP_003578695.1| PREDICTED: H/ACA ribonucleoprotein complex s... 67 1e-09 ref|NP_001060391.1| Os07g0636000 [Oryza sativa Japonica Group] g... 67 1e-09 ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|2... 67 1e-09 >ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis vinifera] Length = 586 Score = 69.7 bits (169), Expect = 2e-10 Identities = 30/39 (76%), Positives = 35/39 (89%) Frame = +3 Query: 3 KLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEP 119 KL+K+GKPNENTP+EW+RNV LP GGDSM+ASLAA EP Sbjct: 400 KLNKHGKPNENTPSEWLRNVVLPTGGDSMVASLAAAVEP 438 >ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|222854887|gb|EEE92434.1| predicted protein [Populus trichocarpa] Length = 593 Score = 68.2 bits (165), Expect = 7e-10 Identities = 31/41 (75%), Positives = 35/41 (85%), Gaps = 1/41 (2%) Frame = +3 Query: 3 KLDKNGKPNENTPAEWMRNVALPPGGDSMIASL-AAVTEPV 122 KLDK+GKPNENTP EWMRN+ LPPGGDSM+A + AA EPV Sbjct: 396 KLDKHGKPNENTPHEWMRNLVLPPGGDSMVAGIAAAAAEPV 436 >ref|XP_003578695.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Brachypodium distachyon] Length = 584 Score = 67.4 bits (163), Expect = 1e-09 Identities = 30/42 (71%), Positives = 35/42 (83%) Frame = +3 Query: 6 LDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVR 131 LDK+GKP E TPAEW+RNVALP GGD+MIAS+AA EP V+ Sbjct: 413 LDKHGKPTEKTPAEWLRNVALPTGGDAMIASIAAAPEPEKVK 454 >ref|NP_001060391.1| Os07g0636000 [Oryza sativa Japonica Group] gi|23237811|dbj|BAC16386.1| putative centromere/microtubule binding protein [Oryza sativa Japonica Group] gi|113611927|dbj|BAF22305.1| Os07g0636000 [Oryza sativa Japonica Group] gi|125559298|gb|EAZ04834.1| hypothetical protein OsI_27012 [Oryza sativa Indica Group] gi|125601221|gb|EAZ40797.1| hypothetical protein OsJ_25275 [Oryza sativa Japonica Group] gi|215734843|dbj|BAG95565.1| unnamed protein product [Oryza sativa Japonica Group] Length = 600 Score = 67.0 bits (162), Expect = 1e-09 Identities = 30/42 (71%), Positives = 35/42 (83%) Frame = +3 Query: 6 LDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPVSVR 131 LDK+GKPNE TPAEW+RNVALP GGD+MIAS+AA E V+ Sbjct: 412 LDKHGKPNEKTPAEWIRNVALPTGGDAMIASIAAAPEEAKVK 453 >ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|222867894|gb|EEF05025.1| predicted protein [Populus trichocarpa] Length = 482 Score = 67.0 bits (162), Expect = 1e-09 Identities = 29/40 (72%), Positives = 33/40 (82%) Frame = +3 Query: 3 KLDKNGKPNENTPAEWMRNVALPPGGDSMIASLAAVTEPV 122 KLDK+GKPN+NTP EW RN+ LP GGDSM+A LAA EPV Sbjct: 384 KLDKHGKPNDNTPHEWARNLVLPAGGDSMVAGLAAAAEPV 423