BLASTX nr result

ID: Panax21_contig00001568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001568
         (2298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   642   0.0  
ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putat...   609   e-171
gb|AEL99139.1| ubiquitin carboxyl-terminal hydrolase, partial [S...   594   e-167
ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|2...   594   e-167
ref|XP_003529967.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   593   e-167

>ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Vitis vinifera]
            gi|297743111|emb|CBI35978.3| unnamed protein product
            [Vitis vinifera]
          Length = 479

 Score =  642 bits (1657), Expect = 0.0
 Identities = 316/382 (82%), Positives = 332/382 (86%)
 Frame = +3

Query: 3    HSAGLFNLGNTCYMNSTVQCLHSVPELKSALIKYPHSGRSNDLDQPSHLLTVATRDLFGE 182
            HSAGLFNLGNTCYMNSTVQCLHSVPELKSALIKYPHSGRSNDLDQPSH+LT ATRDLF E
Sbjct: 102  HSAGLFNLGNTCYMNSTVQCLHSVPELKSALIKYPHSGRSNDLDQPSHMLTCATRDLFSE 161

Query: 183  LDKNVKPVAPMQFWMVLRKKYPQFGQLNNGAFMQQDAEECWTQLLYTLSQSLRTPNSSEN 362
            LDKNVKPVAPMQFWMVLRKKYPQFGQL+NG FMQQDAEECWTQLLYTLSQSLR+P SSEN
Sbjct: 162  LDKNVKPVAPMQFWMVLRKKYPQFGQLHNGVFMQQDAEECWTQLLYTLSQSLRSPGSSEN 221

Query: 363  LDAVKGLFGVELVSRVHCAESGEESTETELVYSLKCHISHEVNHLHEGLKHGXXXXXXXX 542
            LD VK LFGVELVSR+HC ESGEES+ETE VYSLKCHISHEVNHLHEGLKHG        
Sbjct: 222  LDTVKELFGVELVSRMHCEESGEESSETESVYSLKCHISHEVNHLHEGLKHGLKSELEKA 281

Query: 543  XXXXGRSAIYVKDSRINGLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDIYDLCSD 722
                GRSAIYVK+SRINGLPRYLT+QFVRFFWKRESNQKAKILRKVDYPLELD+YDLCSD
Sbjct: 282  SPSLGRSAIYVKESRINGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSD 341

Query: 723  DLRKKLEAPRQTLRDEEGKKLGLKSNQKSSISVDNNVKTXXXXXXXXXXXXXXKATSEGG 902
            DLRKKLEAPRQ LRDEEGKKLGL    K+S S DN+VK                ATS+ G
Sbjct: 342  DLRKKLEAPRQILRDEEGKKLGL----KNSASKDNDVKMADAEGSSNRSGESSLATSDEG 397

Query: 903  VVPAKEMQLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPIPQQEEDIVK 1082
            V   KE  LTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWI++DDDNPIPQ+EEDI K
Sbjct: 398  VPTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEFDDDNPIPQREEDITK 457

Query: 1083 LSGGGDWHMAYICMYKARSVPM 1148
            LSGGGDWHMAYICMYKAR++PM
Sbjct: 458  LSGGGDWHMAYICMYKARTIPM 479


>ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223525817|gb|EEF28259.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 482

 Score =  609 bits (1570), Expect = e-171
 Identities = 301/382 (78%), Positives = 323/382 (84%)
 Frame = +3

Query: 3    HSAGLFNLGNTCYMNSTVQCLHSVPELKSALIKYPHSGRSNDLDQPSHLLTVATRDLFGE 182
            H+AGLFNLGNTCYMNSTVQCLHSVPELKSAL+KYP S R NDLDQ SH+LT ATR+LF E
Sbjct: 102  HTAGLFNLGNTCYMNSTVQCLHSVPELKSALVKYP-SDRRNDLDQTSHMLTTATRELFNE 160

Query: 183  LDKNVKPVAPMQFWMVLRKKYPQFGQLNNGAFMQQDAEECWTQLLYTLSQSLRTPNSSEN 362
            LDK+VKPVAPMQFWMVLRKKYPQFGQL+NG FMQQDAEECWTQLLYTLSQSLR P+ SEN
Sbjct: 161  LDKSVKPVAPMQFWMVLRKKYPQFGQLHNGLFMQQDAEECWTQLLYTLSQSLRPPSPSEN 220

Query: 363  LDAVKGLFGVELVSRVHCAESGEESTETELVYSLKCHISHEVNHLHEGLKHGXXXXXXXX 542
             D VK LFG++LVSR+HC ESGEES+ETE VYSLKCHIS +VNHLHEGLKHG        
Sbjct: 221  PDTVKELFGIDLVSRIHCQESGEESSETESVYSLKCHISQDVNHLHEGLKHGLKSELEKA 280

Query: 543  XXXXGRSAIYVKDSRINGLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDIYDLCSD 722
                GRSAIY+K+S IN LPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELD+YD CS 
Sbjct: 281  SPSLGRSAIYLKESCINDLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSA 340

Query: 723  DLRKKLEAPRQTLRDEEGKKLGLKSNQKSSISVDNNVKTXXXXXXXXXXXXXXKATSEGG 902
            DLRK+LEAPRQ LRDEEG+KLGLK N+KSS S DN+VK               KATSE G
Sbjct: 341  DLRKQLEAPRQILRDEEGRKLGLKVNEKSSGSKDNDVKMTDAEGPSSGSGESSKATSEEG 400

Query: 903  VVPAKEMQLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPIPQQEEDIVK 1082
                K   LTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWI+YDDDNPIPQ+EEDI K
Sbjct: 401  ESSHKVSSLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPIPQREEDITK 460

Query: 1083 LSGGGDWHMAYICMYKARSVPM 1148
            LSGGGDWHMAYICMYKAR+VPM
Sbjct: 461  LSGGGDWHMAYICMYKARAVPM 482


>gb|AEL99139.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
          Length = 476

 Score =  594 bits (1532), Expect = e-167
 Identities = 283/380 (74%), Positives = 325/380 (85%)
 Frame = +3

Query: 3    HSAGLFNLGNTCYMNSTVQCLHSVPELKSALIKYPHSGRSNDLDQPSHLLTVATRDLFGE 182
            +SAGLFNLGNTCYMNST+QCLHSVPELKSAL++Y  SGRSNDLDQ SHLLTVAT+DLF +
Sbjct: 98   YSAGLFNLGNTCYMNSTLQCLHSVPELKSALLEYSQSGRSNDLDQTSHLLTVATKDLFSD 157

Query: 183  LDKNVKPVAPMQFWMVLRKKYPQFGQLNNGAFMQQDAEECWTQLLYTLSQSLRTPNSSEN 362
            LDKN KPVAPMQFWMVLRKK+PQFGQL+NG+FMQQDAEECWTQLLYTLSQSL++ ++ +N
Sbjct: 158  LDKNAKPVAPMQFWMVLRKKFPQFGQLHNGSFMQQDAEECWTQLLYTLSQSLKSSSAGDN 217

Query: 363  LDAVKGLFGVELVSRVHCAESGEESTETELVYSLKCHISHEVNHLHEGLKHGXXXXXXXX 542
            L AVK LFGV+L SRV+C ESGEE+TE E  ++LKCHISHEVNHLHEGLKHG        
Sbjct: 218  LSAVKALFGVDLASRVYCQESGEETTEVESTFALKCHISHEVNHLHEGLKHGLKSELEKN 277

Query: 543  XXXXGRSAIYVKDSRINGLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDIYDLCSD 722
                GRSAIY K+SRI+GLPRYLT+QFVRFFWKRESNQKAKILRKVDYPLELD++D CSD
Sbjct: 278  SPTLGRSAIYFKESRISGLPRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVFDFCSD 337

Query: 723  DLRKKLEAPRQTLRDEEGKKLGLKSNQKSSISVDNNVKTXXXXXXXXXXXXXXKATSEGG 902
            +L+KKLE+PRQ LRDEEG KLGLK +++SS S D ++K                 TS+ G
Sbjct: 338  ELKKKLESPRQILRDEEGIKLGLKPSEQSSSSKDKDIKMVDVEVSSNGCGESSSGTSQDG 397

Query: 903  VVPAKEMQLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPIPQQEEDIVK 1082
             +P +E QLTG+YDLVAVLTHKGRSADSGHYVAWVKQE+GKW++YDDDNPIPQ+EEDIVK
Sbjct: 398  -LPEREAQLTGVYDLVAVLTHKGRSADSGHYVAWVKQENGKWVEYDDDNPIPQREEDIVK 456

Query: 1083 LSGGGDWHMAYICMYKARSV 1142
            LSGGGDWHMAYICMYKAR++
Sbjct: 457  LSGGGDWHMAYICMYKARTI 476


>ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|222835980|gb|EEE74401.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  594 bits (1532), Expect = e-167
 Identities = 292/382 (76%), Positives = 318/382 (83%)
 Frame = +3

Query: 3    HSAGLFNLGNTCYMNSTVQCLHSVPELKSALIKYPHSGRSNDLDQPSHLLTVATRDLFGE 182
            H+AGLFNLGNTCYMNSTVQCLHSVP+LKSAL  YP S +S+DLDQ SH+LT ATR+LF E
Sbjct: 102  HTAGLFNLGNTCYMNSTVQCLHSVPDLKSALSNYP-SQKSSDLDQTSHMLTAATRELFNE 160

Query: 183  LDKNVKPVAPMQFWMVLRKKYPQFGQLNNGAFMQQDAEECWTQLLYTLSQSLRTPNSSEN 362
            LDK+VKPVAPMQFWMVLRKKYPQFGQL+NG +MQQDAEECWTQLLYTLSQSLR+P+ S+N
Sbjct: 161  LDKSVKPVAPMQFWMVLRKKYPQFGQLHNGVYMQQDAEECWTQLLYTLSQSLRSPSPSQN 220

Query: 363  LDAVKGLFGVELVSRVHCAESGEESTETELVYSLKCHISHEVNHLHEGLKHGXXXXXXXX 542
             D +K LFG+ELVSRVHC ESGEES+ETE VYSLKCHIS EVNHLHEGLKHG        
Sbjct: 221  PDTIKELFGIELVSRVHCQESGEESSETESVYSLKCHISQEVNHLHEGLKHGLKSELEKA 280

Query: 543  XXXXGRSAIYVKDSRINGLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDIYDLCSD 722
                GRSAIY+K+S IN LPRYLTVQFVRFFWKRESNQKAKILRKVDYPL+LD+YD CSD
Sbjct: 281  SPSLGRSAIYLKESCINALPRYLTVQFVRFFWKRESNQKAKILRKVDYPLQLDVYDFCSD 340

Query: 723  DLRKKLEAPRQTLRDEEGKKLGLKSNQKSSISVDNNVKTXXXXXXXXXXXXXXKATSEGG 902
            DLRK LEAPRQ LRDEEGKK GLK+  KSS S DN+ K                +TS  G
Sbjct: 341  DLRKNLEAPRQILRDEEGKKAGLKAKVKSSSSKDNDAKMTDVEGPSNESVKSSNSTSGEG 400

Query: 903  VVPAKEMQLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPIPQQEEDIVK 1082
                KE  LTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWI+YDDDNPIPQ+EEDI K
Sbjct: 401  GSSDKESHLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIEYDDDNPIPQREEDITK 460

Query: 1083 LSGGGDWHMAYICMYKARSVPM 1148
            LSGGGDWHMAYICMYKAR+ P+
Sbjct: 461  LSGGGDWHMAYICMYKARAFPV 482


>ref|XP_003529967.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like [Glycine max]
          Length = 480

 Score =  593 bits (1530), Expect = e-167
 Identities = 294/387 (75%), Positives = 323/387 (83%), Gaps = 7/387 (1%)
 Frame = +3

Query: 3    HSAGLFNLGNTCYMNSTVQCLHSVPELKSALIKYPHSGRSNDLDQPSHLLTVATRDLFGE 182
            H+AGLFNLGNTCYMNST+QCLHSVPELKSAL  Y HSGR+ND+DQ SHLLT+ATRDLF E
Sbjct: 102  HTAGLFNLGNTCYMNSTLQCLHSVPELKSALTNYSHSGRNNDVDQSSHLLTIATRDLFSE 161

Query: 183  LDKNVKPVAPMQFWMVLRKKYPQFGQLNNGAFMQQDAEECWTQLLYTLSQSLRTPNSSEN 362
            LDK+VKPVAPMQFWMVLRKKYPQFGQL+NG FMQQDAEECWTQLLYTLSQSLR+P SSEN
Sbjct: 162  LDKSVKPVAPMQFWMVLRKKYPQFGQLHNGVFMQQDAEECWTQLLYTLSQSLRSPGSSEN 221

Query: 363  LDAVKGLFGVELVSRVHCAESGEESTETELVYSLKCHISHEVNHLHEGLKHGXXXXXXXX 542
             DAVK LFG+EL+SR+HC ES EES+E E VYSLKCHIS EVNHLHEG+KHG        
Sbjct: 222  PDAVKALFGIELISRIHCQESKEESSEAESVYSLKCHISQEVNHLHEGIKHGLKSELEKA 281

Query: 543  XXXXGRSAIYVKDSRINGLPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDIYDLCSD 722
                GRSAI++K+SRIN LPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELD+YD CSD
Sbjct: 282  SLVLGRSAIHLKESRINALPRYLTVQFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSD 341

Query: 723  DLRKKLEAPRQTLRDEEGKKLGLKSNQKSSISVDNNVKTXXXXXXXXXXXXXXKATSEGG 902
            +LRKKLEAPRQ LR+EEGKKLGLK N+KSS+  +N+VK                ATS GG
Sbjct: 342  ELRKKLEAPRQILRNEEGKKLGLKVNEKSSVQKENDVKMSDAEG----------ATSGGG 391

Query: 903  ---VVP----AKEMQLTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPIPQ 1061
               VVP     KE Q+TGIYDLVAVLTHKGRSADSGHYV WVKQE+GKWI++DDDNP P+
Sbjct: 392  EPSVVPMEEGEKETQMTGIYDLVAVLTHKGRSADSGHYVGWVKQENGKWIEFDDDNPKPK 451

Query: 1062 QEEDIVKLSGGGDWHMAYICMYKARSV 1142
             EEDI +LSGGGDWHMAYI MYKAR V
Sbjct: 452  LEEDITRLSGGGDWHMAYIIMYKARVV 478


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