BLASTX nr result

ID: Panax21_contig00001567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001567
         (2474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156990.1| PREDICTED: isoleucine--tRNA ligase, cytoplas...    74   1e-10
ref|XP_004152106.1| PREDICTED: isoleucine--tRNA ligase, cytoplas...    74   1e-10
ref|XP_002883406.1| hypothetical protein ARALYDRAFT_342459 [Arab...    72   7e-10
ref|XP_002868681.1| hypothetical protein ARALYDRAFT_916271 [Arab...    70   2e-09
ref|XP_002271242.1| PREDICTED: structure-specific endonuclease s...    70   4e-09

>ref|XP_004156990.1| PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Cucumis
            sativus]
          Length = 1120

 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +1

Query: 1852 RYVSLFDYFKDFSDVAFKVVADDYVTSDSGSGTVRCAPAFGE 1977
            +YV LFDYFK+FSDVAF+VVAD YVT DSG+G V CAPAFGE
Sbjct: 258  KYVPLFDYFKEFSDVAFRVVADSYVTDDSGTGIVHCAPAFGE 299


>ref|XP_004152106.1| PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Cucumis
            sativus]
          Length = 1184

 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +1

Query: 1852 RYVSLFDYFKDFSDVAFKVVADDYVTSDSGSGTVRCAPAFGE 1977
            +YV LFDYFK+FSDVAF+VVAD YVT DSG+G V CAPAFGE
Sbjct: 322  KYVPLFDYFKEFSDVAFRVVADSYVTDDSGTGIVHCAPAFGE 363


>ref|XP_002883406.1| hypothetical protein ARALYDRAFT_342459 [Arabidopsis lyrata subsp.
            lyrata] gi|297329246|gb|EFH59665.1| hypothetical protein
            ARALYDRAFT_342459 [Arabidopsis lyrata subsp. lyrata]
          Length = 1015

 Score = 72.0 bits (175), Expect = 7e-10
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = +1

Query: 1852 RYVSLFDYFKDFSDVAFKVVADDYVTSDSGSGTVRCAPAFGE 1977
            +Y  LFDYF DFS VAF+VVADDYVT+DSG+G V CAPAFGE
Sbjct: 256  KYEPLFDYFNDFSSVAFRVVADDYVTNDSGTGIVHCAPAFGE 297


>ref|XP_002868681.1| hypothetical protein ARALYDRAFT_916271 [Arabidopsis lyrata subsp.
            lyrata] gi|297314517|gb|EFH44940.1| hypothetical protein
            ARALYDRAFT_916271 [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = +1

Query: 1852 RYVSLFDYFKDFSDVAFKVVADDYVTSDSGSGTVRCAPAFGE 1977
            +Y  LFDYF DFS VAF+VVADDYVT DSG+G V CAPAFGE
Sbjct: 304  KYEPLFDYFSDFSCVAFRVVADDYVTDDSGTGIVHCAPAFGE 345


>ref|XP_002271242.1| PREDICTED: structure-specific endonuclease subunit slx1 [Vitis
            vinifera] gi|296085104|emb|CBI28599.3| unnamed protein
            product [Vitis vinifera]
          Length = 160

 Score = 69.7 bits (169), Expect = 4e-09
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 2267 RCLKQHNGELKGGAKASRSGRPWVSACLIQGFSDKSK 2377
            R LKQHNGELKGGAKASR+GRPWV AC+IQGF DKS+
Sbjct: 62   RRLKQHNGELKGGAKASRTGRPWVCACIIQGFKDKSE 98


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