BLASTX nr result

ID: Panax21_contig00001564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001564
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275216.1| PREDICTED: translocon-associated protein sub...   109   5e-22
ref|XP_003536065.1| PREDICTED: 60S ribosomal protein L22-2-like ...   108   6e-22
emb|CAN73614.1| hypothetical protein VITISV_004108 [Vitis vinifera]   108   8e-22
ref|XP_002283554.1| PREDICTED: 60S ribosomal protein L22-2 [Viti...   107   2e-21
ref|XP_002516939.1| 60S ribosomal protein L22, putative [Ricinus...   107   2e-21

>ref|XP_002275216.1| PREDICTED: translocon-associated protein subunit alpha [Vitis
           vinifera] gi|147821778|emb|CAN77171.1| hypothetical
           protein VITISV_029842 [Vitis vinifera]
           gi|297744658|emb|CBI37920.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  109 bits (272), Expect = 5e-22
 Identities = 56/88 (63%), Positives = 66/88 (75%)
 Frame = -3

Query: 264 QVVRCQXXXXXXXXXXXEVGELGIVGDDVQDYSGGSFSPAPGVETVCVFPKNPSKLVVAG 85
           QV RCQ             G+LGIVG+D QD+  GSFSPAPGV+TVCVFPKN ++LV AG
Sbjct: 19  QVARCQSEVEVSEAAEEG-GDLGIVGEDAQDFGDGSFSPAPGVDTVCVFPKNSARLVTAG 77

Query: 84  EITELLVGLKYEGESNLNVIAVQASVHL 1
           E  ELLVG+K +GES+LNVIAV+ASVHL
Sbjct: 78  EEAELLVGMKNDGESSLNVIAVKASVHL 105


>ref|XP_003536065.1| PREDICTED: 60S ribosomal protein L22-2-like [Glycine max]
          Length = 124

 Score =  108 bits (271), Expect = 6e-22
 Identities = 55/77 (71%), Positives = 62/77 (80%)
 Frame = +2

Query: 404 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDSVTVIREKSKIIVSSDANFSX 583
           TFTIDC KPVEDKIM+IASLEKFLQERIKVGGKAGALGDS+TV+REK+KIIV+SD+NFS 
Sbjct: 17  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVVREKTKIIVTSDSNFSK 76

Query: 584 XXXXXXXXXXXXXNNVR 634
                        +NVR
Sbjct: 77  RYLKYLTKKYLKKHNVR 93


>emb|CAN73614.1| hypothetical protein VITISV_004108 [Vitis vinifera]
          Length = 124

 Score =  108 bits (270), Expect = 8e-22
 Identities = 56/77 (72%), Positives = 62/77 (80%)
 Frame = +2

Query: 404 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDSVTVIREKSKIIVSSDANFSX 583
           TFTIDCGKPVEDKIM+IASLEKFLQERIKVGGKAGALGDSVTV REKSKI+V+S++NFS 
Sbjct: 17  TFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKIMVTSESNFSK 76

Query: 584 XXXXXXXXXXXXXNNVR 634
                        +NVR
Sbjct: 77  RYLKYLTKKYLKKHNVR 93


>ref|XP_002283554.1| PREDICTED: 60S ribosomal protein L22-2 [Vitis vinifera]
           gi|296089712|emb|CBI39531.3| unnamed protein product
           [Vitis vinifera]
          Length = 124

 Score =  107 bits (267), Expect = 2e-21
 Identities = 56/77 (72%), Positives = 61/77 (79%)
 Frame = +2

Query: 404 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDSVTVIREKSKIIVSSDANFSX 583
           TFTIDCGKPVEDKIM+IASLEKFLQERIKVGGKAGALGDSVTV REKSKI+V+S+ NFS 
Sbjct: 17  TFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKIMVTSENNFSK 76

Query: 584 XXXXXXXXXXXXXNNVR 634
                        +NVR
Sbjct: 77  RYLKYLTKKYLKKHNVR 93


>ref|XP_002516939.1| 60S ribosomal protein L22, putative [Ricinus communis]
           gi|223544027|gb|EEF45553.1| 60S ribosomal protein L22,
           putative [Ricinus communis]
          Length = 127

 Score =  107 bits (266), Expect = 2e-21
 Identities = 56/77 (72%), Positives = 60/77 (77%)
 Frame = +2

Query: 404 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDSVTVIREKSKIIVSSDANFSX 583
           TFTIDC KPVEDKIM+IASLEKFLQERIKVGGKAGALGDSVTV REKSKI V+SD+NFS 
Sbjct: 20  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSK 79

Query: 584 XXXXXXXXXXXXXNNVR 634
                        +NVR
Sbjct: 80  RYLKYLTKKYLKKHNVR 96


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