BLASTX nr result

ID: Panax21_contig00001563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001563
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB82905.1| glutamate decarboxylase [Panax ginseng]                489   e-136
gb|AAM48129.1|AF506366_1 glutamate decarboxylase [Nicotiana taba...   471   e-130
ref|XP_002327596.1| predicted protein [Populus trichocarpa] gi|2...   470   e-130
gb|AAC24195.1| glutamate decarboxylase isozyme 1 [Nicotiana taba...   470   e-130
ref|NP_001233822.1| glutamate decarboxylase isoform2 [Solanum ly...   469   e-130

>gb|ADB82905.1| glutamate decarboxylase [Panax ginseng]
          Length = 496

 Score =  489 bits (1260), Expect = e-136
 Identities = 241/258 (93%), Positives = 241/258 (93%)
 Frame = +3

Query: 3   SLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYV 182
           SLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYV
Sbjct: 26  SLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYV 85

Query: 183 DMDEYPVTTELQNRCVNMIAHLFNAPLXXXXXXXXXXXXXXXXXIMLAGLAFKRKWQNKM 362
           DMDEYPVTTELQNRCVNMIAHLFNAPL                 IMLAGLAFKRKWQNKM
Sbjct: 86  DMDEYPVTTELQNRCVNMIAHLFNAPLGEVETAVGVGTVGSSEAIMLAGLAFKRKWQNKM 145

Query: 363 KALGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTIC 542
           KALGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTIC
Sbjct: 146 KALGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTIC 205

Query: 543 VAAILGSTLNGEFEDVKRVNDLLVKKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 722
           VAAILGSTLNGEFEDVKRVNDLLVKKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL
Sbjct: 206 VAAILGSTLNGEFEDVKRVNDLLVKKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 265

Query: 723 PLVKSINVSGHKYGLVYA 776
           PLVKSINVSGHKYGLVYA
Sbjct: 266 PLVKSINVSGHKYGLVYA 283


>gb|AAM48129.1|AF506366_1 glutamate decarboxylase [Nicotiana tabacum]
          Length = 496

 Score =  471 bits (1211), Expect = e-130
 Identities = 230/258 (89%), Positives = 236/258 (91%)
 Frame = +3

Query: 3   SLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYV 182
           SLPRFKM ENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC+ L+M S+NKNYV
Sbjct: 26  SLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNTLMMDSINKNYV 85

Query: 183 DMDEYPVTTELQNRCVNMIAHLFNAPLXXXXXXXXXXXXXXXXXIMLAGLAFKRKWQNKM 362
           DMDEYPVTTELQNRCVNMIAHLFNAPL                 IMLAGLAFKRKWQNKM
Sbjct: 86  DMDEYPVTTELQNRCVNMIAHLFNAPLGDGETAVGVGTVGSSEAIMLAGLAFKRKWQNKM 145

Query: 363 KALGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTIC 542
           KA GKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL DGYYVMDPEKAVEMVDENTIC
Sbjct: 146 KAQGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYYVMDPEKAVEMVDENTIC 205

Query: 543 VAAILGSTLNGEFEDVKRVNDLLVKKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 722
           VAAILGSTLNGEFEDVKR+NDLL++KNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL
Sbjct: 206 VAAILGSTLNGEFEDVKRLNDLLIEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 265

Query: 723 PLVKSINVSGHKYGLVYA 776
           PLVKSINVSGHKYGLVYA
Sbjct: 266 PLVKSINVSGHKYGLVYA 283


>ref|XP_002327596.1| predicted protein [Populus trichocarpa] gi|222836150|gb|EEE74571.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  470 bits (1210), Expect = e-130
 Identities = 229/258 (88%), Positives = 238/258 (92%)
 Frame = +3

Query: 3   SLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYV 182
           SLPRFKM ENSIPKEAA+QIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAS+NKNYV
Sbjct: 26  SLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYV 85

Query: 183 DMDEYPVTTELQNRCVNMIAHLFNAPLXXXXXXXXXXXXXXXXXIMLAGLAFKRKWQNKM 362
           DMDEYPVTTELQNRCVN+IAHLFNAPL                 IMLAGLAFKR+WQNKM
Sbjct: 86  DMDEYPVTTELQNRCVNIIAHLFNAPLGDSETAIGVGTVGSSEAIMLAGLAFKRRWQNKM 145

Query: 363 KALGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTIC 542
           KA GKP+DKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAV+MVDENTIC
Sbjct: 146 KAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVKMVDENTIC 205

Query: 543 VAAILGSTLNGEFEDVKRVNDLLVKKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 722
           VAAILGSTLNGEFEDVK +NDLLV+KNKETGWDTPIHVDAASGGFIAPF+YPELEWDFRL
Sbjct: 206 VAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRL 265

Query: 723 PLVKSINVSGHKYGLVYA 776
           PLVKSINVSGHKYGLVYA
Sbjct: 266 PLVKSINVSGHKYGLVYA 283


>gb|AAC24195.1| glutamate decarboxylase isozyme 1 [Nicotiana tabacum]
          Length = 496

 Score =  470 bits (1209), Expect = e-130
 Identities = 230/258 (89%), Positives = 236/258 (91%)
 Frame = +3

Query: 3   SLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYV 182
           SLPRFKM ENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC+KL+M S+NKNYV
Sbjct: 26  SLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECNKLMMDSINKNYV 85

Query: 183 DMDEYPVTTELQNRCVNMIAHLFNAPLXXXXXXXXXXXXXXXXXIMLAGLAFKRKWQNKM 362
           DMDEYPVTTELQNRCVNMIAHLFNAPL                 IMLAGLAFKRKWQNKM
Sbjct: 86  DMDEYPVTTELQNRCVNMIAHLFNAPLGDGETAVGVGTVGSSEAIMLAGLAFKRKWQNKM 145

Query: 363 KALGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTIC 542
           KA GKP DKPNIVTGANVQVCWEKFARYFEVELKEVKL DGYYVMDPEKAVEMVDENTIC
Sbjct: 146 KAQGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYYVMDPEKAVEMVDENTIC 205

Query: 543 VAAILGSTLNGEFEDVKRVNDLLVKKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 722
           VAAILGSTLNGEFEDVKR+NDLL++KNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL
Sbjct: 206 VAAILGSTLNGEFEDVKRLNDLLIEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 265

Query: 723 PLVKSINVSGHKYGLVYA 776
           PLVKSINVSGHKYGLVYA
Sbjct: 266 PLVKSINVSGHKYGLVYA 283


>ref|NP_001233822.1| glutamate decarboxylase isoform2 [Solanum lycopersicum]
           gi|171854579|dbj|BAG16480.1| glutamate decarboxylase
           isoform2 [Solanum lycopersicum]
          Length = 503

 Score =  469 bits (1208), Expect = e-130
 Identities = 228/258 (88%), Positives = 236/258 (91%)
 Frame = +3

Query: 3   SLPRFKMGENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYV 182
           SLPRFKM ENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKL+M S+NKNYV
Sbjct: 26  SLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMDSINKNYV 85

Query: 183 DMDEYPVTTELQNRCVNMIAHLFNAPLXXXXXXXXXXXXXXXXXIMLAGLAFKRKWQNKM 362
           DMDEYPVTTELQNRCVNMIAHLFNAPL                 IMLAGLAFKRKWQNKM
Sbjct: 86  DMDEYPVTTELQNRCVNMIAHLFNAPLEDGETAVGVGTVGSSEAIMLAGLAFKRKWQNKM 145

Query: 363 KALGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTIC 542
           KA GKP+DKPNIVTGANVQVCWEKFARYFEVELKEVKL DGYYVM PEKAVEMVDENTIC
Sbjct: 146 KAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTDGYYVMSPEKAVEMVDENTIC 205

Query: 543 VAAILGSTLNGEFEDVKRVNDLLVKKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 722
           VAAILGSTLNGEFEDVK++NDLL++KNKETGWDTPIHVDAASGGFIAPF+YPELEWDFRL
Sbjct: 206 VAAILGSTLNGEFEDVKKLNDLLIEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRL 265

Query: 723 PLVKSINVSGHKYGLVYA 776
           PLVKSINVSGHKYGLVYA
Sbjct: 266 PLVKSINVSGHKYGLVYA 283


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