BLASTX nr result

ID: Panax21_contig00001529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001529
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]              78   2e-12
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...    75   1e-11
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni...    75   1e-11
gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]        75   1e-11
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...    75   1e-11

>gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
          Length = 532

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
 Frame = -2

Query: 526 YIAYLPSISDAKIPSY--DWSGDVVVNVYINHEKKFVFVEMRSVEEASNAMALDGIIFE- 356
           Y+  LP  ++ ++      +SGD VVNVYINHEKKF FVEMRSVEEASNAMALDG+IFE 
Sbjct: 212 YVGGLPPTANEQVLKILLKFSGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEG 271

Query: 355 -VLKSSRGVEYLHFLKLTL 302
             +K  R  +Y   L  TL
Sbjct: 272 GPVKVRRPSDYNPSLAATL 290


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
           sativus]
          Length = 587

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 42/58 (72%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = -2

Query: 469 GDVVVNVYINHEKKFVFVEMRSVEEASNAMALDGIIFE--VLKSSRGVEYLHFLKLTL 302
           GD VVNVYINHEKKF FVEMRSVEEASNAMALDGIIFE   +K  R  +Y   L  TL
Sbjct: 289 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 346


>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
           sativus]
          Length = 587

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 42/58 (72%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = -2

Query: 469 GDVVVNVYINHEKKFVFVEMRSVEEASNAMALDGIIFE--VLKSSRGVEYLHFLKLTL 302
           GD VVNVYINHEKKF FVEMRSVEEASNAMALDGIIFE   +K  R  +Y   L  TL
Sbjct: 289 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 346


>gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
          Length = 570

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 42/58 (72%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = -2

Query: 469 GDVVVNVYINHEKKFVFVEMRSVEEASNAMALDGIIFE--VLKSSRGVEYLHFLKLTL 302
           GD VVNVYINHEKKF FVEMRSVEEASNAMALDGIIFE   +K  R  +Y   L  TL
Sbjct: 272 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 329


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 568

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 42/58 (72%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = -2

Query: 469 GDVVVNVYINHEKKFVFVEMRSVEEASNAMALDGIIFE--VLKSSRGVEYLHFLKLTL 302
           GD VVNVYINHEKKF FVEMRSVEEASNAMALDGIIFE   +K  R  +Y   L  TL
Sbjct: 269 GDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATL 326


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