BLASTX nr result

ID: Panax21_contig00001523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001523
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265566.1| PREDICTED: protein YIPF5 [Vitis vinifera]         219   1e-55
gb|ADL62869.1| golgi membrane protein sb140 [Prunus persica]          196   1e-48
gb|ADL62864.1| golgi membrane protein sb140 [Prunus armeniaca]        196   1e-48
ref|XP_002312874.1| predicted protein [Populus trichocarpa] gi|1...   193   1e-47
ref|XP_003558161.1| PREDICTED: protein YIPF5-like [Brachypodium ...   192   3e-47

>ref|XP_002265566.1| PREDICTED: protein YIPF5 [Vitis vinifera]
          Length = 248

 Score =  219 bits (559), Expect = 1e-55
 Identities = 106/120 (88%), Positives = 111/120 (92%)
 Frame = +3

Query: 3   LFQLLAGKLHFGIILGWVTVSALFLYVVFNMLAGRNGNLDLYRCLSLIGYCMLPIVILSA 182
           LFQLLAGK+HFGIILGWV V+ALFLYVVFNMLAGRNGNLDLYRCLSLIGYCMLP+VILSA
Sbjct: 127 LFQLLAGKIHFGIILGWVIVAALFLYVVFNMLAGRNGNLDLYRCLSLIGYCMLPLVILSA 186

Query: 183 ISLFVPQGGAAILAITGVFVIWSTRVCTRLLVELASCGDEHRGLIAYACFLIYMLFSLLV 362
            SLFVPQGG  I  +  VFV+WSTRVCTRLLVELASCGDEHRGLI YACFLIYMLFSLLV
Sbjct: 187 FSLFVPQGGLVIFGMAAVFVLWSTRVCTRLLVELASCGDEHRGLITYACFLIYMLFSLLV 246


>gb|ADL62869.1| golgi membrane protein sb140 [Prunus persica]
          Length = 254

 Score =  196 bits (499), Expect = 1e-48
 Identities = 92/120 (76%), Positives = 107/120 (89%)
 Frame = +3

Query: 3   LFQLLAGKLHFGIILGWVTVSALFLYVVFNMLAGRNGNLDLYRCLSLIGYCMLPIVILSA 182
           LFQLLAGK+ FG+ILGW+ VS++FLY+VFNMLAGRNGNLDL+RC S+IGYCMLP+VILSA
Sbjct: 133 LFQLLAGKIQFGVILGWIVVSSIFLYIVFNMLAGRNGNLDLHRCTSVIGYCMLPVVILSA 192

Query: 183 ISLFVPQGGAAILAITGVFVIWSTRVCTRLLVELASCGDEHRGLIAYACFLIYMLFSLLV 362
            SLFVPQGG+  +A+  VFV+W+TRVCT L+V LA  GDEHRGLIAYACFLIY LFSLLV
Sbjct: 193 ASLFVPQGGSFRIAVAAVFVLWATRVCTGLMVALADGGDEHRGLIAYACFLIYTLFSLLV 252


>gb|ADL62864.1| golgi membrane protein sb140 [Prunus armeniaca]
          Length = 255

 Score =  196 bits (499), Expect = 1e-48
 Identities = 92/120 (76%), Positives = 107/120 (89%)
 Frame = +3

Query: 3   LFQLLAGKLHFGIILGWVTVSALFLYVVFNMLAGRNGNLDLYRCLSLIGYCMLPIVILSA 182
           LFQLLAGK+ FG+ILGW+ VS++FLY+VFNMLAGRNGNLDL+RC S+IGYCMLP+VILSA
Sbjct: 134 LFQLLAGKIQFGVILGWIVVSSIFLYIVFNMLAGRNGNLDLHRCTSVIGYCMLPVVILSA 193

Query: 183 ISLFVPQGGAAILAITGVFVIWSTRVCTRLLVELASCGDEHRGLIAYACFLIYMLFSLLV 362
            SLFVPQGG+  +A+  VFV+W+TRVCT L+V LA  GDEHRGLIAYACFLIY LFSLLV
Sbjct: 194 ASLFVPQGGSFRIAVAAVFVLWATRVCTGLMVALADGGDEHRGLIAYACFLIYTLFSLLV 253


>ref|XP_002312874.1| predicted protein [Populus trichocarpa] gi|118483530|gb|ABK93663.1|
           unknown [Populus trichocarpa]
           gi|222849282|gb|EEE86829.1| predicted protein [Populus
           trichocarpa]
          Length = 250

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/120 (75%), Positives = 106/120 (88%)
 Frame = +3

Query: 3   LFQLLAGKLHFGIILGWVTVSALFLYVVFNMLAGRNGNLDLYRCLSLIGYCMLPIVILSA 182
           LFQLLAGK+ FG+ILGW+ VS++FLYVVFNMLAGR+GNLDL+ C S+IGYC+LP+VILSA
Sbjct: 129 LFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRHGNLDLHTCTSVIGYCLLPVVILSA 188

Query: 183 ISLFVPQGGAAILAITGVFVIWSTRVCTRLLVELASCGDEHRGLIAYACFLIYMLFSLLV 362
           +SLFVPQ GA  L I+GVFVIWSTR CT L+V +A  G+EHRGLIAYACFLIY LFSLLV
Sbjct: 189 VSLFVPQNGAIRLGISGVFVIWSTRACTNLMVAVADGGEEHRGLIAYACFLIYTLFSLLV 248


>ref|XP_003558161.1| PREDICTED: protein YIPF5-like [Brachypodium distachyon]
          Length = 254

 Score =  192 bits (487), Expect = 3e-47
 Identities = 91/121 (75%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   LFQLLAGKLHFGIILGWVTVSALFLYVVFNMLAG-RNGNLDLYRCLSLIGYCMLPIVILS 179
           LFQLLAGK HFGI+LGWVTV++LFLY VF+ML+G R G+LDLYRC+SL+GYCMLP+VI S
Sbjct: 132 LFQLLAGKFHFGIVLGWVTVASLFLYFVFSMLSGGRRGDLDLYRCVSLVGYCMLPMVIFS 191

Query: 180 AISLFVPQGGAAILAITGVFVIWSTRVCTRLLVELASCGDEHRGLIAYACFLIYMLFSLL 359
           A+SLF+P+GG  I  +   FV+WSTRVCTRLL ELAS GDEHRGLIAYAC+L+YMLFSLL
Sbjct: 192 AVSLFLPRGGGLIFGVGMAFVLWSTRVCTRLLAELASSGDEHRGLIAYACWLVYMLFSLL 251

Query: 360 V 362
           V
Sbjct: 252 V 252


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