BLASTX nr result
ID: Panax21_contig00001448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00001448
(878 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525787.1| Ubiquitin carboxyl-terminal hydrolase, putat... 119 6e-49
ref|XP_004146842.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 101 9e-46
ref|XP_004154814.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 101 9e-46
gb|AFW80182.1| ubiquitin carboxyl-terminal hydrolase isoform 1 [... 107 1e-45
ref|NP_001169228.1| uncharacterized protein LOC100383086 [Zea ma... 107 1e-45
>ref|XP_002525787.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223534937|gb|EEF36623.1| Ubiquitin carboxyl-terminal
hydrolase, putative [Ricinus communis]
Length = 791
Score = 119 bits (298), Expect(3) = 6e-49
Identities = 61/84 (72%), Positives = 67/84 (79%), Gaps = 4/84 (4%)
Frame = -1
Query: 737 GLTSFPDYLVLHM*KFVMESGWVPKKLDV----PETIDISYMRSKGLQQGEELLPEAVGG 570
GLTSFP+YLVLHM KFVME GWVPKKLDV P+ IDIS+MRS+GLQ GE+LLPE V G
Sbjct: 536 GLTSFPEYLVLHMRKFVMEEGWVPKKLDVYIDVPDVIDISHMRSRGLQPGEQLLPEGVSG 595
Query: 569 GESELQKILPNEDIVSQLVVMGFN 498
GE E KI+ NEDIV QL MGFN
Sbjct: 596 GEVEANKIVANEDIVFQLRSMGFN 619
Score = 65.9 bits (159), Expect(3) = 6e-49
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = -3
Query: 876 EGKEVSADEIVRPRVRLEDCLQNFSAEEEVHEFYSTALKAKTTAVNRSDFVS 721
+GK+VS++EIVRPRV LE CL +FSA EE+ +FYSTAL AKTTA + S
Sbjct: 488 KGKDVSSEEIVRPRVPLEACLASFSAPEEIQDFYSTALNAKTTAEKTAGLTS 539
Score = 57.0 bits (136), Expect(3) = 6e-49
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = -3
Query: 507 GIQQLHCQKAAINTSNVGVEEAMTWLLFHMDDP 409
G L+CQKAAINT N GVEEAM WLL HMDDP
Sbjct: 617 GFNHLYCQKAAINTFNTGVEEAMNWLLSHMDDP 649
>ref|XP_004146842.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Cucumis
sativus]
Length = 807
Score = 101 bits (252), Expect(3) = 9e-46
Identities = 57/85 (67%), Positives = 63/85 (74%), Gaps = 6/85 (7%)
Frame = -1
Query: 734 LTSFPDYLVLHM*KFVMESGWVPKKLDV----PETIDISYMRSKGLQQGEELLPEAVGGG 567
LTSFPDYLVLHM KF+M GWVPKKLDV P+ ID+S MRSKG Q GEELLPEA G
Sbjct: 551 LTSFPDYLVLHMRKFIMGEGWVPKKLDVYIDVPDIIDLSQMRSKGPQAGEELLPEA--GP 608
Query: 566 ESELQKILP--NEDIVSQLVVMGFN 498
E + Q P N+DIV+QLV MGFN
Sbjct: 609 EDDFQSNRPTANDDIVAQLVSMGFN 633
Score = 69.3 bits (168), Expect(3) = 9e-46
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = -3
Query: 876 EGKEVSADEIVRPRVRLEDCLQNFSAEEEVHEFYSTALKAKTTAVNRSDFVS 721
EGKE+ DEIVRPRV LE CL +FS+ EE+H+FYSTAL+ KTTA+ + S
Sbjct: 502 EGKELGTDEIVRPRVPLEACLASFSSPEEIHDFYSTALQTKTTAIKTARLTS 553
Score = 60.5 bits (145), Expect(3) = 9e-46
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 507 GIQQLHCQKAAINTSNVGVEEAMTWLLFHMDDP 409
G LHC+KAAINTSN GVEEAM WLL HMDDP
Sbjct: 631 GFNHLHCEKAAINTSNAGVEEAMNWLLSHMDDP 663
>ref|XP_004154814.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Cucumis
sativus]
Length = 793
Score = 101 bits (252), Expect(3) = 9e-46
Identities = 57/85 (67%), Positives = 63/85 (74%), Gaps = 6/85 (7%)
Frame = -1
Query: 734 LTSFPDYLVLHM*KFVMESGWVPKKLDV----PETIDISYMRSKGLQQGEELLPEAVGGG 567
LTSFPDYLVLHM KF+M GWVPKKLDV P+ ID+S MRSKG Q GEELLPEA G
Sbjct: 537 LTSFPDYLVLHMRKFIMGEGWVPKKLDVYIDVPDIIDLSQMRSKGPQAGEELLPEA--GP 594
Query: 566 ESELQKILP--NEDIVSQLVVMGFN 498
E + Q P N+DIV+QLV MGFN
Sbjct: 595 EDDFQSNRPTANDDIVAQLVSMGFN 619
Score = 69.3 bits (168), Expect(3) = 9e-46
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = -3
Query: 876 EGKEVSADEIVRPRVRLEDCLQNFSAEEEVHEFYSTALKAKTTAVNRSDFVS 721
EGKE+ DEIVRPRV LE CL +FS+ EE+H+FYSTAL+ KTTA+ + S
Sbjct: 488 EGKELGTDEIVRPRVPLEACLASFSSPEEIHDFYSTALQTKTTAIKTARLTS 539
Score = 60.5 bits (145), Expect(3) = 9e-46
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 507 GIQQLHCQKAAINTSNVGVEEAMTWLLFHMDDP 409
G LHC+KAAINTSN GVEEAM WLL HMDDP
Sbjct: 617 GFNHLHCEKAAINTSNAGVEEAMNWLLSHMDDP 649
>gb|AFW80182.1| ubiquitin carboxyl-terminal hydrolase isoform 1 [Zea mays]
gi|413947534|gb|AFW80183.1| ubiquitin carboxyl-terminal
hydrolase isoform 2 [Zea mays]
Length = 835
Score = 107 bits (267), Expect(3) = 1e-45
Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 5/85 (5%)
Frame = -1
Query: 737 GLTSFPDYLVLHM*KFVMESGWVPKKL----DVPETIDISYMRSKGLQQGEELLPEAVGG 570
G T+FPDYLVLHM KFVME+GWVPKKL DVP+TIDI++MRSKGLQ GEELLPE G
Sbjct: 578 GFTTFPDYLVLHMRKFVMETGWVPKKLDVYIDVPDTIDITHMRSKGLQPGEELLPEGGSG 637
Query: 569 GES-ELQKILPNEDIVSQLVVMGFN 498
+S E + +EDIV+QL MGFN
Sbjct: 638 DDSAEPANPVASEDIVTQLASMGFN 662
Score = 62.4 bits (150), Expect(3) = 1e-45
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = -3
Query: 876 EGKEVSADEIVRPRVRLEDCLQNFSAEEEVHEFYSTALKAKTTAVNRSDFVS 721
+GKEVS ++IVRPRV LE CL +FS EE+ +FYSTAL +KTT + F +
Sbjct: 530 DGKEVSNEDIVRPRVPLEACLSSFSGPEEIPDFYSTALNSKTTVTKTAGFTT 581
Score = 61.2 bits (147), Expect(3) = 1e-45
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = -3
Query: 507 GIQQLHCQKAAINTSNVGVEEAMTWLLFHMDDP 409
G LHCQKAAINTSN GVEEAM WLL HMDDP
Sbjct: 660 GFNYLHCQKAAINTSNTGVEEAMNWLLSHMDDP 692
>ref|NP_001169228.1| uncharacterized protein LOC100383086 [Zea mays]
gi|223975677|gb|ACN32026.1| unknown [Zea mays]
gi|223975851|gb|ACN32113.1| unknown [Zea mays]
Length = 795
Score = 107 bits (267), Expect(3) = 1e-45
Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 5/85 (5%)
Frame = -1
Query: 737 GLTSFPDYLVLHM*KFVMESGWVPKKL----DVPETIDISYMRSKGLQQGEELLPEAVGG 570
G T+FPDYLVLHM KFVME+GWVPKKL DVP+TIDI++MRSKGLQ GEELLPE G
Sbjct: 538 GFTTFPDYLVLHMRKFVMETGWVPKKLDVYIDVPDTIDITHMRSKGLQPGEELLPEGGSG 597
Query: 569 GES-ELQKILPNEDIVSQLVVMGFN 498
+S E + +EDIV+QL MGFN
Sbjct: 598 DDSAEPANPVASEDIVTQLASMGFN 622
Score = 62.4 bits (150), Expect(3) = 1e-45
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = -3
Query: 876 EGKEVSADEIVRPRVRLEDCLQNFSAEEEVHEFYSTALKAKTTAVNRSDFVS 721
+GKEVS ++IVRPRV LE CL +FS EE+ +FYSTAL +KTT + F +
Sbjct: 490 DGKEVSNEDIVRPRVPLEACLSSFSGPEEIPDFYSTALNSKTTVTKTAGFTT 541
Score = 61.2 bits (147), Expect(3) = 1e-45
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = -3
Query: 507 GIQQLHCQKAAINTSNVGVEEAMTWLLFHMDDP 409
G LHCQKAAINTSN GVEEAM WLL HMDDP
Sbjct: 620 GFNYLHCQKAAINTSNTGVEEAMNWLLSHMDDP 652