BLASTX nr result

ID: Panax21_contig00001440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001440
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P83442.1|LEAD3_DAUCA RecName: Full=Late embryogenesis abundan...   119   1e-24
gb|AAG24641.1|AF308736_1 Lea1P [Daucus carota]                        117   3e-24
gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus...   100   5e-19
gb|AAV67892.1| late embryogenesis-abundant protein [Chorispora b...    92   2e-16
ref|NP_175678.1| late embryogenesis abundant domain-containing p...    90   7e-16

>sp|P83442.1|LEAD3_DAUCA RecName: Full=Late embryogenesis abundant protein Dc3
          Length = 163

 Score =  119 bits (297), Expect = 1e-24
 Identities = 72/149 (48%), Positives = 85/149 (57%), Gaps = 26/149 (17%)
 Frame = +1

Query: 97  MSSHQDPSYKAGEAKGQAQEKTGQTMDSMKEKAQAAKDKASEKAGSAK----ESKDQTGS 264
           M+SHQD SYKAGE KG AQEKTGQ  D+MK+KAQAAKDKASE AGSA+    ESKDQTGS
Sbjct: 1   MASHQDQSYKAGEPKGHAQEKTGQMADTMKDKAQAAKDKASEMAGSARDRTVESKDQTGS 60

Query: 265 YLSEKTG----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXVLSSA 378
           Y+S+K G                                                ++SSA
Sbjct: 61  YVSDKAGAVKDKTCETAQAAKEKTGGAMQATKEKASEMGESAKETAVAGKEKTGGLMSSA 120

Query: 379 GEQVKNVAQGAADAVKNTFGMGGAAEDDQ 465
            EQVK +AQGA +AVKNTFGM GA E+++
Sbjct: 121 AEQVKGMAQGATEAVKNTFGMAGADEEEK 149


>gb|AAG24641.1|AF308736_1 Lea1P [Daucus carota]
          Length = 159

 Score =  117 bits (293), Expect = 3e-24
 Identities = 74/147 (50%), Positives = 85/147 (57%), Gaps = 26/147 (17%)
 Frame = +1

Query: 97  MSSHQDPSYKAGEAKGQAQEKTGQTMDSMKEKAQAAKDKASEKAGSAK----ESKDQTGS 264
           M+SHQD SYKAGEAKG AQEKTGQ  D++K+KAQAAKDKASE AG+A+    ESKDQTGS
Sbjct: 1   MASHQDTSYKAGEAKGHAQEKTGQMADTIKDKAQAAKDKASELAGTARDRTAESKDQTGS 60

Query: 265 YLS------------------EKTG----XXXXXXXXXXXXXXXXXXXXXXXXXXVLSSA 378
           Y+S                  EKTG                              V+SSA
Sbjct: 61  YVSDKASAARDKSCETGQAAKEKTGGVVEATKEKASQMGESAKETAQAGKEKTGGVISSA 120

Query: 379 GEQVKNVAQGAADAVKNTFGMGGAAED 459
            EQVK +AQGA +AVKNTFGMGG  E+
Sbjct: 121 AEQVKGMAQGATEAVKNTFGMGGGNEE 147


>gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus roseus]
          Length = 163

 Score =  100 bits (248), Expect = 5e-19
 Identities = 70/156 (44%), Positives = 78/156 (50%), Gaps = 36/156 (23%)
 Frame = +1

Query: 97  MSSHQDPSYKAGEAKGQAQEKTGQTMDSMKEKAQAAKDKASEKA----GSAKESKDQTGS 264
           M+SH+  SYKAGEAKGQAQEKTGQ M  +KEK Q AKDKASE A    G A+E KDQTGS
Sbjct: 1   MASHEQ-SYKAGEAKGQAQEKTGQMMGDVKEKTQQAKDKASETAQSAQGRAQEKKDQTGS 59

Query: 265 YLSEKTG----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXVLSSA 378
           Y+S+K G                                                 L   
Sbjct: 60  YVSDKAGAAKDKLSETTQSAKERASGAAEATKQKASEMAQSGKETAEAGKEKTGGFLQKT 119

Query: 379 GEQVKNVAQGAADAVKNTFGM----------GGAAE 456
           GEQVK +AQGAADAVK+TFGM          GGAAE
Sbjct: 120 GEQVKGMAQGAADAVKHTFGMAESEEGFENKGGAAE 155


>gb|AAV67892.1| late embryogenesis-abundant protein [Chorispora bungeana]
          Length = 169

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 55/142 (38%), Positives = 69/142 (48%), Gaps = 26/142 (18%)
 Frame = +1

Query: 97  MSSHQDPSYKAGEAKGQAQEKTGQTMDSMKEKAQAAKDKASEKAGS-------------- 234
           M+SHQ+ SYKAGE KG+ QEKTG+ + +M+EK +AAKDK  E A S              
Sbjct: 1   MASHQEQSYKAGETKGKTQEKTGEALGTMREKTEAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 235 ------------AKESKDQTGSYLSEKTGXXXXXXXXXXXXXXXXXXXXXXXXXXVLSSA 378
                       A+ESKD+TGSY+SE                             +L   
Sbjct: 61  KTSQAAQTTQKKAEESKDKTGSYMSETGETIKNKAQDTAEYTKETAEAGKDKTSGILGQT 120

Query: 379 GEQVKNVAQGAADAVKNTFGMG 444
           GEQVK +A GA DAVK T G+G
Sbjct: 121 GEQVKQMAMGATDAVKQTLGLG 142


>ref|NP_175678.1| late embryogenesis abundant domain-containing protein [Arabidopsis
           thaliana] gi|42571837|ref|NP_974009.1| late
           embryogenesis abundant domain-containing protein
           [Arabidopsis thaliana]
           gi|5903037|gb|AAD55596.1|AC008016_6 Identical to
           gb|X91919 LEA76 homologue type1 from Arabidopsis
           thaliana. ESTs gb|N97082, gb|Z27056 and gb|Z29902 come
           from this gene [Arabidopsis thaliana]
           gi|14326556|gb|AAK60322.1|AF385732_1 At1g52690/F6D8_9
           [Arabidopsis thaliana] gi|1592675|emb|CAA63012.1| LEA76
           homologue type1 [Arabidopsis thaliana]
           gi|20334736|gb|AAM16229.1| At1g52690/F6D8_9 [Arabidopsis
           thaliana] gi|21593062|gb|AAM65011.1| late
           embryogenesis-abundant protein, putative [Arabidopsis
           thaliana] gi|23397192|gb|AAN31879.1| putative late
           embryogenesis-abundant protein [Arabidopsis thaliana]
           gi|23397195|gb|AAN31880.1| putative late
           embryogenesis-abundant protein [Arabidopsis thaliana]
           gi|332194717|gb|AEE32838.1| late embryogenesis abundant
           domain-containing protein [Arabidopsis thaliana]
           gi|332194718|gb|AEE32839.1| late embryogenesis abundant
           domain-containing protein [Arabidopsis thaliana]
          Length = 169

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 55/141 (39%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
 Frame = +1

Query: 97  MSSHQDPSYKAGEAKGQAQEKTGQTMDSMKEKAQAAKDKASEKAGS-------------- 234
           M+SHQ+ SYKAGE +G+AQEKTG+ M +M +K QAAKDK  E A S              
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 235 ------------AKESKDQTGSYLSEKTGXXXXXXXXXXXXXXXXXXXXXXXXXXVLSSA 378
                       A+ESKD+TGSY+SE                             +L   
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 379 GEQVKNVAQGAADAVKNTFGM 441
           GEQVK +A GA DAVK+T G+
Sbjct: 121 GEQVKQMAMGATDAVKHTLGL 141


Top