BLASTX nr result

ID: Panax21_contig00001305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001305
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66505.1| hypothetical protein VITISV_035498 [Vitis vinifera]   164   8e-39
ref|XP_002272588.2| PREDICTED: uncharacterized protein LOC100248...   164   1e-38
ref|XP_002329947.1| predicted protein [Populus trichocarpa] gi|2...   156   3e-36
ref|XP_002525238.1| transcription factor, putative [Ricinus comm...   154   9e-36
ref|XP_002308734.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32

>emb|CAN66505.1| hypothetical protein VITISV_035498 [Vitis vinifera]
          Length = 306

 Score =  164 bits (416), Expect = 8e-39
 Identities = 88/127 (69%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   LSGVLSEVPGSGEYALLSGNNWPESDNKTDPATPAPTSESPFLDRPIKECAPV--LTVDE 176
           LSGV++EVPGSG    +SG+N  ESD KTDPATPAPTSE P LD+  KE AP   L++DE
Sbjct: 152 LSGVITEVPGSGVSVPVSGDNCLESD-KTDPATPAPTSEGPLLDKAAKETAPAKSLSIDE 210

Query: 177 SFSSHHEPLTPDSGCHVISPVESLNYEQSLKKQRVIIPADYAKPEVALTHQILESSLSPP 356
           SFSSHHEPLTPDSGCHV SP ES   E+S+KKQRV I A YAK E+ LTHQILESSLS  
Sbjct: 211 SFSSHHEPLTPDSGCHVNSPXESPKGERSVKKQRVSIGAAYAKQEMVLTHQILESSLSSS 270

Query: 357 YQQPHSV 377
           + QPHSV
Sbjct: 271 FHQPHSV 277


>ref|XP_002272588.2| PREDICTED: uncharacterized protein LOC100248144 [Vitis vinifera]
          Length = 336

 Score =  164 bits (414), Expect = 1e-38
 Identities = 88/127 (69%), Positives = 99/127 (77%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   LSGVLSEVPGSGEYALLSGNNWPESDNKTDPATPAPTSESPFLDRPIKECAPV--LTVDE 176
           LSGV++EVPGSG    +SG+N  ESD KTDPATPAPTSE P LD+  KE AP   L++DE
Sbjct: 182 LSGVITEVPGSGVSVPVSGDNCLESD-KTDPATPAPTSEGPLLDKAAKETAPAKSLSIDE 240

Query: 177 SFSSHHEPLTPDSGCHVISPVESLNYEQSLKKQRVIIPADYAKPEVALTHQILESSLSPP 356
           SFSSHHEPLTPDSGCHV SP ES   E+S+KKQRV I A YAK E+ LTHQILESSLS  
Sbjct: 241 SFSSHHEPLTPDSGCHVNSPDESPKGERSVKKQRVSIGAAYAKQEMVLTHQILESSLSSS 300

Query: 357 YQQPHSV 377
           + QPHSV
Sbjct: 301 FHQPHSV 307


>ref|XP_002329947.1| predicted protein [Populus trichocarpa] gi|222871969|gb|EEF09100.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  156 bits (394), Expect = 3e-36
 Identities = 83/126 (65%), Positives = 95/126 (75%), Gaps = 2/126 (1%)
 Frame = +3

Query: 3   LSGVLSEVPGSGEYALLSGNNWPESDNKTDPATPAPTSESPFLDRPIKECAPV--LTVDE 176
           LSGVL +VPGSG  A +SG+N P SDNKTDPATPAPTSESP  D+  KECAP   L++DE
Sbjct: 161 LSGVLEDVPGSGVSAPVSGDNCPVSDNKTDPATPAPTSESPLQDKVAKECAPTKSLSIDE 220

Query: 177 SFSSHHEPLTPDSGCHVISPVESLNYEQSLKKQRVIIPADYAKPEVALTHQILESSLSPP 356
           SFSS HEPLTPDS C+  SP ES   E+SLKKQ V +   + KPE+ LTHQILESSL+  
Sbjct: 221 SFSSQHEPLTPDSRCNTGSPAESPRGERSLKKQMVSMGVAFGKPEMVLTHQILESSLN-S 279

Query: 357 YQQPHS 374
           Y QPHS
Sbjct: 280 YPQPHS 285


>ref|XP_002525238.1| transcription factor, putative [Ricinus communis]
           gi|223535535|gb|EEF37204.1| transcription factor,
           putative [Ricinus communis]
          Length = 336

 Score =  154 bits (390), Expect = 9e-36
 Identities = 83/127 (65%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   LSGVLSEVPGSGEYALLSGNNWPESDNKTDPATPAPTSESPFLDRPIKECAPV--LTVDE 176
           LSGVL EVPG+   A +SG+N PESDNKTDPATPAPTSESP  D+  KE AP   L++DE
Sbjct: 182 LSGVLGEVPGAVAAAPVSGDNCPESDNKTDPATPAPTSESPIQDKAAKERAPAKSLSIDE 241

Query: 177 SFSSHHEPLTPDSGCHVISPVESLNYEQSLKKQRVIIPADYAKPEVALTHQILESSLSPP 356
           SFSS HEPLTPDS C+V SP ES   E+S+KKQRV +   Y K E+ LTHQILESSL+  
Sbjct: 242 SFSSRHEPLTPDSRCNVGSPAESPKGERSMKKQRVCMGTSYGKSEMVLTHQILESSLN-S 300

Query: 357 YQQPHSV 377
           Y QPHS+
Sbjct: 301 YPQPHSL 307


>ref|XP_002308734.1| predicted protein [Populus trichocarpa] gi|222854710|gb|EEE92257.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  142 bits (359), Expect = 3e-32
 Identities = 80/126 (63%), Positives = 93/126 (73%), Gaps = 2/126 (1%)
 Frame = +3

Query: 3   LSGVLSEVPGSGEYALLSGNNWPESDNKTDPATPAPTSESPFLDRPIKECAPV--LTVDE 176
           LSGVL +VPGSG  A +SG+N PESD KTDPATPAPTSESP  D+  KE AP   L++DE
Sbjct: 207 LSGVLEDVPGSGVTAPVSGDNCPESD-KTDPATPAPTSESPLQDKAAKERAPAKSLSIDE 265

Query: 177 SFSSHHEPLTPDSGCHVISPVESLNYEQSLKKQRVIIPADYAKPEVALTHQILESSLSPP 356
           SFSS  EPLTPDS C+  SP ES   E+S+KKQRV +   Y K E+ LTHQILESSL+  
Sbjct: 266 SFSSQPEPLTPDSRCNAGSPAESPRGERSMKKQRVSMGVTYGKQEMVLTHQILESSLN-S 324

Query: 357 YQQPHS 374
           Y +PHS
Sbjct: 325 YPRPHS 330


Top