BLASTX nr result

ID: Panax21_contig00001238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001238
         (1894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ...   468   e-129
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...   455   e-125
ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like...   432   e-118
ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   421   e-115
ref|XP_003537469.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   413   e-113

>ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera]
            gi|296086183|emb|CBI31624.3| unnamed protein product
            [Vitis vinifera]
          Length = 453

 Score =  468 bits (1205), Expect = e-129
 Identities = 253/454 (55%), Positives = 305/454 (67%), Gaps = 15/454 (3%)
 Frame = -1

Query: 1531 MSSYSFLEQTLREILRLINPSRDDWAVRFHIIEDVRAAVQSVESLRGATVEPFGSFVSNL 1352
            MS+++ LE  L++IL +INPSR+DWA+R  +I D R AV SVESLRGATVEPFGSF+SNL
Sbjct: 1    MSTFNVLEIVLKDILLVINPSREDWAIRNQLIADFRTAVDSVESLRGATVEPFGSFLSNL 60

Query: 1351 FTKWGDLDISIEILTGSFITSAGKKQKQSFLVDVLKALRRKGTWRKLQFIANARVPILKL 1172
            +T+WGDLDISIE+  G++I+SAGK+ KQ+ L  VL ALR KG WRKLQFI NARVPI+K 
Sbjct: 61   YTQWGDLDISIELPNGAYISSAGKRHKQTLLGHVLNALRSKGGWRKLQFIPNARVPIIKF 120

Query: 1171 EHNLQNIYCDISINNLHGQMKSKLLFWINEIDGRFRDMVLLVKEWAKAHDINDXXXXXXX 992
            E    NI CD+SINNL GQMKSK LFWI+ IDGRFRD+VLLVKEWA+AHDIN+       
Sbjct: 121  ESYHPNISCDVSINNLKGQMKSKFLFWISGIDGRFRDLVLLVKEWARAHDINNSKTGTLN 180

Query: 991  XXXXXXLIIFHFQTCVPAILPPLKEIYPGNMIHDLTGVRTVAEKHIEETCAENINRFRSD 812
                  L++FH QTC PAILPPLKEIYPGN+  DL GVR V E  IEET A NINRF+ D
Sbjct: 181  SYSLSLLVVFHLQTCRPAILPPLKEIYPGNVADDLIGVRAVVEGQIEETSAANINRFKRD 240

Query: 811  RSRGINQSSLSELFVSFFAKFCDISLRASDQGISPYTGQWEDIERNMTWLPKTYAFFVED 632
            RSR  N+SSLSELF+SF AKF DI+ RAS+QGI PYTGQW DI+ NM W+P+TY  FVED
Sbjct: 241  RSRAPNRSSLSELFISFLAKFVDITSRASEQGICPYTGQWVDIDSNMRWMPRTYELFVED 300

Query: 631  PFEQPVNTARTVSSKHLTRITEAFQTTHCSLISANQNQNQSLLFSMLIRRERLLSVTRSP 452
            PFEQP NTAR V S+ L RI+EAFQTTH  L SANQ+Q+   L   L+R +    + R+P
Sbjct: 301  PFEQPENTARGVRSRQLQRISEAFQTTHQRLTSANQDQHS--LIDTLVRPQIAQFIRRAP 358

Query: 451  VRIPSNHG-----SYPGSP--VGIPIN-QGNYRRTRPQ-------VSRAAXXXXXXXXXX 317
             R  S +G     +YP  P     P+  Q +++  RPQ          A           
Sbjct: 359  SRNSSAYGRNNSRTYPSVPNVANSPLQFQNDFQNRRPQSRPNTTSQRSAPVQARPNSVTM 418

Query: 316  XSTWXXXXXXXXXXXXXXXXNHSQVQQMWRPRSD 215
              +                   SQ Q++WRPRSD
Sbjct: 419  QRSMYTRPGSSTVQRSVQQATQSQSQRVWRPRSD 452


>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
            gi|223536493|gb|EEF38140.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  455 bits (1170), Expect = e-125
 Identities = 230/394 (58%), Positives = 288/394 (73%)
 Frame = -1

Query: 1531 MSSYSFLEQTLREILRLINPSRDDWAVRFHIIEDVRAAVQSVESLRGATVEPFGSFVSNL 1352
            M+++S LE  LR+ L +I P R+DWAVR  IIE+++  + S+ESLRGATVEPFGSFVSNL
Sbjct: 1    MNAHSVLEPILRDTLEVIKPLREDWAVRSKIIEELKDVIASIESLRGATVEPFGSFVSNL 60

Query: 1351 FTKWGDLDISIEILTGSFITSAGKKQKQSFLVDVLKALRRKGTWRKLQFIANARVPILKL 1172
            FT+WGDLDISI +  GS+I+SA KK+KQ+ L +  KALR+KG WR+LQF+ NARVP+LK 
Sbjct: 61   FTRWGDLDISIMLANGSYISSAAKKRKQNVLREFHKALRQKGGWRRLQFVPNARVPLLKF 120

Query: 1171 EHNLQNIYCDISINNLHGQMKSKLLFWINEIDGRFRDMVLLVKEWAKAHDINDXXXXXXX 992
            E   QNI CD+SI+NL GQ+KS  LFW+N+IDGRFRDMVLLVKEWAKAH+IN+       
Sbjct: 121  ESGRQNISCDVSIDNLQGQIKSNFLFWLNQIDGRFRDMVLLVKEWAKAHNINNPKTGTLN 180

Query: 991  XXXXXXLIIFHFQTCVPAILPPLKEIYPGNMIHDLTGVRTVAEKHIEETCAENINRFRSD 812
                  L+IFHFQTCVPAILPPLKEIYP N++ DLTGVRTVAE+ I+ETC  NI R+ SD
Sbjct: 181  SYSLSLLVIFHFQTCVPAILPPLKEIYPRNVVDDLTGVRTVAEERIKETCNANIARYMSD 240

Query: 811  RSRGINQSSLSELFVSFFAKFCDISLRASDQGISPYTGQWEDIERNMTWLPKTYAFFVED 632
            + R +N+SSLSELF+SFFAKF  ISL+A+D GI  +TGQW DI   M WLPKTYA F+ED
Sbjct: 241  KYRAVNRSSLSELFISFFAKFSGISLKAADLGICTFTGQWLDIRSTMRWLPKTYALFIED 300

Query: 631  PFEQPVNTARTVSSKHLTRITEAFQTTHCSLISANQNQNQSLLFSMLIRRERLLSVTRSP 452
            PFEQP N AR VS+ +L +I EAFQTT+  L+ ANQN+    L   L+R E L  +  +P
Sbjct: 301  PFEQPENAARAVSAGNLVKIAEAFQTTYHKLVLANQNRTS--LLGTLVRPEILNCIAGTP 358

Query: 451  VRIPSNHGSYPGSPVGIPINQGNYRRTRPQVSRA 350
            VR              +     +Y+ T PQ+S++
Sbjct: 359  VR-------------NLSYTSLHYQSTHPQISKS 379


>ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like [Glycine max]
          Length = 415

 Score =  432 bits (1111), Expect = e-118
 Identities = 228/394 (57%), Positives = 274/394 (69%)
 Frame = -1

Query: 1531 MSSYSFLEQTLREILRLINPSRDDWAVRFHIIEDVRAAVQSVESLRGATVEPFGSFVSNL 1352
            MS++S L+  + +ILR++ P ++DW +RF II D+R+ V+SVESLRGATVEPFGSFVSNL
Sbjct: 1    MSTHSTLDIVVNDILRVVTPVQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSNL 60

Query: 1351 FTKWGDLDISIEILTGSFITSAGKKQKQSFLVDVLKALRRKGTWRKLQFIANARVPILKL 1172
            FT+WGDLDISIE+  G  I+SAGKKQKQ+FL DVLKALR KG    LQFI+NARVPILK 
Sbjct: 61   FTRWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILKF 120

Query: 1171 EHNLQNIYCDISINNLHGQMKSKLLFWINEIDGRFRDMVLLVKEWAKAHDINDXXXXXXX 992
            +   Q + CDISINNL GQMKSK+L WIN+IDGRFR MVLLVKEWAKAH IN+       
Sbjct: 121  KSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFN 180

Query: 991  XXXXXXLIIFHFQTCVPAILPPLKEIYPGNMIHDLTGVRTVAEKHIEETCAENINRFRSD 812
                  L+IF+FQTC+PAI PPLK+IYPGNM+ DL GVR+ AE  I +TC  NINRF S+
Sbjct: 181  SYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMVDDLIGVRSDAENLIAQTCDANINRFISN 240

Query: 811  RSRGINQSSLSELFVSFFAKFCDISLRASDQGISPYTGQWEDIERNMTWLPKTYAFFVED 632
            R+R IN+ S++ELFV F  KF  +   A   GI PY+G+WE IE NM WLPKTYA FVED
Sbjct: 241  RARSINRKSVAELFVEFIGKFAKMDSMAVKMGICPYSGKWEQIEDNMIWLPKTYAIFVED 300

Query: 631  PFEQPVNTARTVSSKHLTRITEAFQTTHCSLISANQNQNQSLLFSMLIRRERLLSVTRSP 452
            PFEQP NTAR+VS+  L +ITEAF  TH  L S NQNQ    L S +     +  +TR  
Sbjct: 301  PFEQPQNTARSVSAGQLKKITEAFARTHDLLTSTNQNQIS--LLSNMAPAHVIRCITR-- 356

Query: 451  VRIPSNHGSYPGSPVGIPINQGNYRRTRPQVSRA 350
                             P   G +  T+PQV RA
Sbjct: 357  -----------------PYGGGYFHPTQPQVQRA 373


>ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus]
            gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA
            polymerase GLD2-like [Cucumis sativus]
          Length = 464

 Score =  421 bits (1083), Expect = e-115
 Identities = 216/388 (55%), Positives = 272/388 (70%)
 Frame = -1

Query: 1513 LEQTLREILRLINPSRDDWAVRFHIIEDVRAAVQSVESLRGATVEPFGSFVSNLFTKWGD 1334
            L++ +++ILR++ P +DDW  RF +I ++R  VQS+ESLRGAT+EPFGSFVSNLF++WGD
Sbjct: 6    LDRVIKDILRVVEPLQDDWTARFQVINELRNVVQSIESLRGATIEPFGSFVSNLFSRWGD 65

Query: 1333 LDISIEILTGSFITSAGKKQKQSFLVDVLKALRRKGTWRKLQFIANARVPILKLEHNLQN 1154
            LD+S+++  GS+ ++AGKK+KQ+ L D+  A R+ G W KLQ I +ARVPILK+EH   N
Sbjct: 66   LDLSVQLNNGSYTSTAGKKRKQTLLRDIQNASRKNGRWYKLQLIPHARVPILKIEHIQHN 125

Query: 1153 IYCDISINNLHGQMKSKLLFWINEIDGRFRDMVLLVKEWAKAHDINDXXXXXXXXXXXXX 974
            I CDISI+NL GQ+KSK+L W+NEIDGRF DMVLLVKEWAKAHDIN+             
Sbjct: 126  ISCDISIDNLVGQIKSKILLWVNEIDGRFHDMVLLVKEWAKAHDINNSKQGTFNSYSLSL 185

Query: 973  LIIFHFQTCVPAILPPLKEIYPGNMIHDLTGVRTVAEKHIEETCAENINRFRSDRSRGIN 794
            L+IFHFQTC PAI PPL++IYPGN++ +L GVR   E  I  TCA NI RF   +SR  N
Sbjct: 186  LVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVRAEVENEIARTCATNIARF---KSRTAN 242

Query: 793  QSSLSELFVSFFAKFCDISLRASDQGISPYTGQWEDIERNMTWLPKTYAFFVEDPFEQPV 614
            +SSLSELFVSF AKF DIS +AS+ GI PYTGQW  IE NM WLPKTYA FVEDPFEQP 
Sbjct: 243  RSSLSELFVSFLAKFSDISSKASELGICPYTGQWLKIESNMRWLPKTYAIFVEDPFEQPE 302

Query: 613  NTARTVSSKHLTRITEAFQTTHCSLISANQNQNQSLLFSMLIRRERLLSVTRSPVRIPSN 434
            NTAR ++++ L RI+EAF+ TH  L S  QN++ S+L  +   +   L +  S       
Sbjct: 303  NTARAINARQLMRISEAFRMTHLRLTSVYQNRS-SILNDLARPQISQLIINSS------- 354

Query: 433  HGSYPGSPVGIPINQGNYRRTRPQVSRA 350
                 GS      N  NY   RPQV +A
Sbjct: 355  -----GSASAPAFNVENYTPIRPQVHQA 377


>ref|XP_003537469.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Glycine max]
          Length = 328

 Score =  413 bits (1061), Expect = e-113
 Identities = 206/324 (63%), Positives = 247/324 (76%)
 Frame = -1

Query: 1531 MSSYSFLEQTLREILRLINPSRDDWAVRFHIIEDVRAAVQSVESLRGATVEPFGSFVSNL 1352
            MS++S L+  + +ILR++ P ++DW +RF II D R+ V+SVESLRGATVEP+GSFVSNL
Sbjct: 1    MSTHSMLDIVVNDILRVVTPLQEDWEIRFAIINDFRSIVESVESLRGATVEPYGSFVSNL 60

Query: 1351 FTKWGDLDISIEILTGSFITSAGKKQKQSFLVDVLKALRRKGTWRKLQFIANARVPILKL 1172
            FT+WGDLDISIE+  G  I+SAGKKQKQ+ L +VLKALR KG    LQFI+NARVPILK 
Sbjct: 61   FTRWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFISNARVPILKF 120

Query: 1171 EHNLQNIYCDISINNLHGQMKSKLLFWINEIDGRFRDMVLLVKEWAKAHDINDXXXXXXX 992
            +   Q + CDISINNL GQMKSK+L WIN+IDGRFR MVLLVKEWAKAH IN+       
Sbjct: 121  KSYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFN 180

Query: 991  XXXXXXLIIFHFQTCVPAILPPLKEIYPGNMIHDLTGVRTVAEKHIEETCAENINRFRSD 812
                  L+IF+FQTC+PAI PPLK+IYPGNMI DL G+R+ AE  I ETC  NINRF S+
Sbjct: 181  SYSLSLLVIFYFQTCIPAIFPPLKDIYPGNMIDDLIGIRSDAENLIAETCDANINRFISN 240

Query: 811  RSRGINQSSLSELFVSFFAKFCDISLRASDQGISPYTGQWEDIERNMTWLPKTYAFFVED 632
            R+R IN+ S++ELFV F  KF  +   A + GI PYTG+WE IE NM WLPKTYA FVED
Sbjct: 241  RARSINRKSVAELFVDFVGKFAKMDSMAVEMGICPYTGKWEQIEDNMIWLPKTYAIFVED 300

Query: 631  PFEQPVNTARTVSSKHLTRITEAF 560
            PFEQP NTAR+VS+  L +ITE F
Sbjct: 301  PFEQPQNTARSVSAGQLKKITETF 324


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