BLASTX nr result

ID: Panax21_contig00001234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001234
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putativ...   378   e-102
gb|ADV04058.1| DEAD box RNA helicase RH2b [Hevea brasiliensis]        375   e-102
gb|ADV04057.1| DEAD box RNA helicase RH2a [Hevea brasiliensis]        375   e-102
sp|P41380.1|IF4A3_NICPL RecName: Full=Eukaryotic initiation fact...   374   e-101
ref|XP_004148574.1| PREDICTED: eukaryotic initiation factor 4A-3...   373   e-101

>ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539871|gb|EEF41450.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 407

 Score =  378 bits (970), Expect = e-102
 Identities = 187/196 (95%), Positives = 194/196 (98%)
 Frame = +2

Query: 329 VQALILSPTRELAAQTEKTVLAIGNYINIQAHACIGGKSVGEDIRKLEYGVQVVSGTPGR 508
           VQALILSPTRELAAQTEK +LAIG+YINIQAHACIGGKSVGEDIRKLEYGV VVSGTPGR
Sbjct: 103 VQALILSPTRELAAQTEKVILAIGDYINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGR 162

Query: 509 VCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 688
           VCDMIKRRTLRTRAIKLL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL
Sbjct: 163 VCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 222

Query: 689 EMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEREDWKFDTLCDLYDTLTITQAVIFCNT 868
           EMTSKFMTDP++ILVKRDELTLEGIKQFFVAVERE+WKFDTLCDLYDTLTITQAVIFCNT
Sbjct: 223 EMTSKFMTDPIKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNT 282

Query: 869 KRKVDWLTEKMRDNNF 916
           KRKVDWLTEKMR+NNF
Sbjct: 283 KRKVDWLTEKMRNNNF 298


>gb|ADV04058.1| DEAD box RNA helicase RH2b [Hevea brasiliensis]
          Length = 395

 Score =  375 bits (963), Expect = e-102
 Identities = 186/196 (94%), Positives = 193/196 (98%)
 Frame = +2

Query: 329 VQALILSPTRELAAQTEKTVLAIGNYINIQAHACIGGKSVGEDIRKLEYGVQVVSGTPGR 508
           VQALILSPTRELAAQTEK +LAIG+YINIQAHACIGGKSVGEDIRKLE+GV VVSGTPGR
Sbjct: 91  VQALILSPTRELAAQTEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVHVVSGTPGR 150

Query: 509 VCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 688
           VCDMIKRRTLRTRAI+LL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL
Sbjct: 151 VCDMIKRRTLRTRAIRLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 210

Query: 689 EMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEREDWKFDTLCDLYDTLTITQAVIFCNT 868
           EMTSKFMTDPV+ILVKRDELTLEGIKQFFVAVERE+WKFDTLCDLYDTLTITQAVIFCNT
Sbjct: 211 EMTSKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNT 270

Query: 869 KRKVDWLTEKMRDNNF 916
           KRKVDWLTEKMR NNF
Sbjct: 271 KRKVDWLTEKMRSNNF 286


>gb|ADV04057.1| DEAD box RNA helicase RH2a [Hevea brasiliensis]
          Length = 373

 Score =  375 bits (963), Expect = e-102
 Identities = 186/196 (94%), Positives = 193/196 (98%)
 Frame = +2

Query: 329 VQALILSPTRELAAQTEKTVLAIGNYINIQAHACIGGKSVGEDIRKLEYGVQVVSGTPGR 508
           VQALILSPTRELAAQTEK +LAIG+YINIQAHACIGGKSVGEDIRKLE+GV VVSGTPGR
Sbjct: 69  VQALILSPTRELAAQTEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVHVVSGTPGR 128

Query: 509 VCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 688
           VCDMIKRRTLRTRAI+LL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL
Sbjct: 129 VCDMIKRRTLRTRAIRLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 188

Query: 689 EMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEREDWKFDTLCDLYDTLTITQAVIFCNT 868
           EMTSKFMTDPV+ILVKRDELTLEGIKQFFVAVERE+WKFDTLCDLYDTLTITQAVIFCNT
Sbjct: 189 EMTSKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNT 248

Query: 869 KRKVDWLTEKMRDNNF 916
           KRKVDWLTEKMR NNF
Sbjct: 249 KRKVDWLTEKMRSNNF 264


>sp|P41380.1|IF4A3_NICPL RecName: Full=Eukaryotic initiation factor 4A-3; Short=eIF-4A-3;
           AltName: Full=ATP-dependent RNA helicase eIF4A-3
           gi|19699|emb|CAA43514.1| nicotiana eukaryotic
           translation initiation factor 4A [Nicotiana
           plumbaginifolia]
          Length = 391

 Score =  374 bits (959), Expect = e-101
 Identities = 185/196 (94%), Positives = 193/196 (98%)
 Frame = +2

Query: 329 VQALILSPTRELAAQTEKTVLAIGNYINIQAHACIGGKSVGEDIRKLEYGVQVVSGTPGR 508
           VQALILSPTRELAAQTEK +LAIG+YIN+QAHACIGGKSVGEDIRKLE+GVQVVSGTPGR
Sbjct: 87  VQALILSPTRELAAQTEKVILAIGDYINVQAHACIGGKSVGEDIRKLEHGVQVVSGTPGR 146

Query: 509 VCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 688
           VCDMIKRRTLRTR IKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL
Sbjct: 147 VCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 206

Query: 689 EMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEREDWKFDTLCDLYDTLTITQAVIFCNT 868
           E+TSKFMTDPVRILVKRDELTLEGIKQFFVAVE+E+WKFDTLCDLYDTLTITQAVIFCNT
Sbjct: 207 EITSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNT 266

Query: 869 KRKVDWLTEKMRDNNF 916
           KRKVDWLT KMR+NNF
Sbjct: 267 KRKVDWLTSKMRENNF 282


>ref|XP_004148574.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Cucumis sativus]
           gi|449508400|ref|XP_004163303.1| PREDICTED: eukaryotic
           initiation factor 4A-3-like [Cucumis sativus]
          Length = 410

 Score =  373 bits (958), Expect = e-101
 Identities = 185/196 (94%), Positives = 193/196 (98%)
 Frame = +2

Query: 329 VQALILSPTRELAAQTEKTVLAIGNYINIQAHACIGGKSVGEDIRKLEYGVQVVSGTPGR 508
           VQALILSPTRELA QTEK +LAIG+YINIQAHACIGGKSVGEDIRKLE+GVQVVSGTPGR
Sbjct: 106 VQALILSPTRELATQTEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGR 165

Query: 509 VCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEIL 688
           VCDMIKRRTLRTRAIKLL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP+EIL
Sbjct: 166 VCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEIL 225

Query: 689 EMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEREDWKFDTLCDLYDTLTITQAVIFCNT 868
           EMT+KFMTDPVRILVKRDELTLEGIKQFFVAVERE+WKFDTLCDLYDTLTITQAVIFCNT
Sbjct: 226 EMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNT 285

Query: 869 KRKVDWLTEKMRDNNF 916
           KRKV+WLTEKMR NNF
Sbjct: 286 KRKVEWLTEKMRSNNF 301


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