BLASTX nr result

ID: Panax21_contig00001224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001224
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140669.1| PREDICTED: ABC transporter C family member 5...   143   1e-31
gb|AFK48198.1| unknown [Lotus japonicus]                              135   3e-29
ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit...   133   9e-29
ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-28
ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   132   3e-28

>ref|XP_004140669.1| PREDICTED: ABC transporter C family member 5-like [Cucumis sativus]
            gi|449487419|ref|XP_004157617.1| PREDICTED: ABC
            transporter C family member 5-like [Cucumis sativus]
          Length = 1752

 Score =  143 bits (360), Expect = 1e-31
 Identities = 73/121 (60%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = -1

Query: 478  KATIMKPAAMVGTEDRILNPWAHYVKKYGFLPLFGDGSTKYYSN*NLVDF*NTIGKCELY 299
            KATI++PA M+GTEDRILNPWAH+ KKYGF+PLFG+GST Y ++                
Sbjct: 1553 KATILRPATMIGTEDRILNPWAHFAKKYGFIPLFGNGSTNYPNH---------------- 1596

Query: 298  SKLFVRFGS*QC-VCRIQPVYVVDVASAIVAALKDDGTSMGKVYELGGPEIYTMRQLAEL 122
                      QC +CRIQPVYVVDVA  IV+ALKDDGTS+GKVYELGGPEIY++  LAEL
Sbjct: 1597 ----------QCYLCRIQPVYVVDVAGGIVSALKDDGTSIGKVYELGGPEIYSVHDLAEL 1646

Query: 121  M 119
            M
Sbjct: 1647 M 1647


>gb|AFK48198.1| unknown [Lotus japonicus]
          Length = 396

 Score =  135 bits (339), Expect = 3e-29
 Identities = 71/120 (59%), Positives = 79/120 (65%)
 Frame = -1

Query: 478 KATIMKPAAMVGTEDRILNPWAHYVKKYGFLPLFGDGSTKYYSN*NLVDF*NTIGKCELY 299
           +ATI+KPA M+GTEDRILN WAH+ KKY FLPLFGDGSTK                    
Sbjct: 207 EATILKPATMIGTEDRILNRWAHFAKKYSFLPLFGDGSTK-------------------- 246

Query: 298 SKLFVRFGS*QCVCRIQPVYVVDVASAIVAALKDDGTSMGKVYELGGPEIYTMRQLAELM 119
                          IQPVYVVDVA+A+ AALKDDGTSMGKVYELGGPE+YTM +LAELM
Sbjct: 247 ---------------IQPVYVVDVANALTAALKDDGTSMGKVYELGGPEVYTMHELAELM 291


>ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus
           communis] gi|223534095|gb|EEF35812.1| NADH-ubiquinone
           oxidoreductase 39 kD subunit, putative [Ricinus
           communis]
          Length = 394

 Score =  133 bits (335), Expect = 9e-29
 Identities = 69/120 (57%), Positives = 81/120 (67%)
 Frame = -1

Query: 478 KATIMKPAAMVGTEDRILNPWAHYVKKYGFLPLFGDGSTKYYSN*NLVDF*NTIGKCELY 299
           +AT+MKPAAM+GTEDRILN WAH+VKKY FLPLFGDGSTK                    
Sbjct: 211 EATVMKPAAMIGTEDRILNKWAHFVKKYSFLPLFGDGSTK-------------------- 250

Query: 298 SKLFVRFGS*QCVCRIQPVYVVDVASAIVAALKDDGTSMGKVYELGGPEIYTMRQLAELM 119
                          +QPVYVVDVA+AI+AALKDDG+SMGK+YELGGPEI T+ +LAE+M
Sbjct: 251 ---------------LQPVYVVDVAAAIIAALKDDGSSMGKIYELGGPEILTVHELAEIM 295


>ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|222862069|gb|EEE99611.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  132 bits (332), Expect = 2e-28
 Identities = 69/120 (57%), Positives = 79/120 (65%)
 Frame = -1

Query: 478 KATIMKPAAMVGTEDRILNPWAHYVKKYGFLPLFGDGSTKYYSN*NLVDF*NTIGKCELY 299
           +AT+MKPA M+GTEDRILN WAH+ KKY FLPL GDGSTK                    
Sbjct: 205 EATVMKPAVMIGTEDRILNRWAHFTKKYSFLPLIGDGSTK-------------------- 244

Query: 298 SKLFVRFGS*QCVCRIQPVYVVDVASAIVAALKDDGTSMGKVYELGGPEIYTMRQLAELM 119
                          IQPVYVVD+A+AI+AALKDDGTSMGKVYELGGPEI+T+ +LAELM
Sbjct: 245 ---------------IQPVYVVDIAAAIIAALKDDGTSMGKVYELGGPEIFTVHELAELM 289


>ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 9, mitochondrial-like [Glycine max]
          Length = 396

 Score =  132 bits (331), Expect = 3e-28
 Identities = 66/120 (55%), Positives = 80/120 (66%)
 Frame = -1

Query: 478 KATIMKPAAMVGTEDRILNPWAHYVKKYGFLPLFGDGSTKYYSN*NLVDF*NTIGKCELY 299
           +ATI+KPA M+GTEDRILNPWAH+ KKYGFLPLFGDGSTK                    
Sbjct: 207 EATILKPAVMIGTEDRILNPWAHFAKKYGFLPLFGDGSTK-------------------- 246

Query: 298 SKLFVRFGS*QCVCRIQPVYVVDVASAIVAALKDDGTSMGKVYELGGPEIYTMRQLAELM 119
                          IQPVYV+DVA+A+ + LKDDGTSMGK+YELGGPEI+T+ +LA++M
Sbjct: 247 ---------------IQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVM 291


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