BLASTX nr result

ID: Panax21_contig00001220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001220
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]   665   0.0  
ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   664   0.0  
emb|CBI21817.3| unnamed protein product [Vitis vinifera]              664   0.0  
ref|XP_002532827.1| mitochondrial translational initiation facto...   662   0.0  
ref|XP_003546780.1| PREDICTED: translation initiation factor IF-...   654   0.0  

>emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]
          Length = 1005

 Score =  665 bits (1717), Expect = 0.0
 Identities = 339/399 (84%), Positives = 366/399 (91%)
 Frame = +1

Query: 1    KTTLLDHIQKTKVAASEAGGITQGIGAYKVQVPIDGKLRQCVFLDTPGHEAFGAMRARGA 180
            KTTLLDHI+K+KV ASEAGGITQGIGAYKV VPIDGK + CVFLDTPGHEAFGAMRARGA
Sbjct: 491  KTTLLDHIRKSKVTASEAGGITQGIGAYKVLVPIDGKPQSCVFLDTPGHEAFGAMRARGA 550

Query: 181  RITXXXXXXXXXXXGIRPQTNEAITHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL 360
            R+T           GIRPQTNEAI HAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL
Sbjct: 551  RVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL 610

Query: 361  MPEDWGGDIPMIQISALKGVNVDELLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKG 540
            MPEDWGGDIPM+QISALKG NVD+LLET+MLVAELQELKANP RNAKGTVIEAGLDKSKG
Sbjct: 611  MPEDWGGDIPMVQISALKGENVDDLLETIMLVAELQELKANPDRNAKGTVIEAGLDKSKG 670

Query: 541  PVATFIVQNGTLKRGDIVVCGEAFGKVRALFNDGGKRVDEAGPSLPIQVIGLNNVPFAGD 720
            PVATFIVQNGTLKRGDIVVCG AFGKVRALF+DGGKRVD AGPS+P+QVIGLNNVP AGD
Sbjct: 671  PVATFIVQNGTLKRGDIVVCGGAFGKVRALFDDGGKRVDAAGPSIPVQVIGLNNVPIAGD 730

Query: 721  EFEVVGSLDNAREKAESRAETIRNERISAKAGDGKITLSSFASAVSSRTHAGLDLHQLVI 900
            EFEVVGSLD ARE+AE+RAE++R ERISAKAGDGK+TLSSFASAVS  + +GLDLHQL I
Sbjct: 731  EFEVVGSLDIARERAEARAESLRQERISAKAGDGKVTLSSFASAVSGGSQSGLDLHQLNI 790

Query: 901  IMKVDLQGSIEAIRQAIQVLPQDNVTLKFLLQSTGDVSNSDVDLAVASKAIIFGFNVRAP 1080
            IMKVD+QGSIEA+RQA+QVLPQDNV LKFLLQ+TGD+S SD+DLAVASKAI+ GFNVRAP
Sbjct: 791  IMKVDVQGSIEAVRQALQVLPQDNVALKFLLQATGDISASDIDLAVASKAIVIGFNVRAP 850

Query: 1081 GSVKSYADNKGVEIRLYRVIYELIDDVRTAMEGLLEPVE 1197
            GSVKSYAD KGVEIRLY+VIY+LIDDVR AMEGLL+ VE
Sbjct: 851  GSVKSYADTKGVEIRLYKVIYDLIDDVRNAMEGLLDAVE 889


>ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2,
            chloroplastic-like [Vitis vinifera]
          Length = 1047

 Score =  664 bits (1714), Expect = 0.0
 Identities = 338/399 (84%), Positives = 366/399 (91%)
 Frame = +1

Query: 1    KTTLLDHIQKTKVAASEAGGITQGIGAYKVQVPIDGKLRQCVFLDTPGHEAFGAMRARGA 180
            KTTLLDHI+K+KV ASEAGGITQGIGAYKV VPIDGK + CVFLDTPGHEAFGAMRARGA
Sbjct: 501  KTTLLDHIRKSKVTASEAGGITQGIGAYKVLVPIDGKPQSCVFLDTPGHEAFGAMRARGA 560

Query: 181  RITXXXXXXXXXXXGIRPQTNEAITHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL 360
            R+T           GIRPQTNEAI HAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL
Sbjct: 561  RVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL 620

Query: 361  MPEDWGGDIPMIQISALKGVNVDELLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKG 540
            MPEDWGGDIPM+QISALKG NVD+LLET+MLVAELQELKANP RNAKGTVIEAGLDKSKG
Sbjct: 621  MPEDWGGDIPMVQISALKGENVDDLLETIMLVAELQELKANPDRNAKGTVIEAGLDKSKG 680

Query: 541  PVATFIVQNGTLKRGDIVVCGEAFGKVRALFNDGGKRVDEAGPSLPIQVIGLNNVPFAGD 720
            PVATFIVQNGTLKRGDIVVCG AFGKVRALF+DGGKRVD AGPS+P+QVIGLNNVP AGD
Sbjct: 681  PVATFIVQNGTLKRGDIVVCGGAFGKVRALFDDGGKRVDAAGPSIPVQVIGLNNVPIAGD 740

Query: 721  EFEVVGSLDNAREKAESRAETIRNERISAKAGDGKITLSSFASAVSSRTHAGLDLHQLVI 900
            EFEVVGSLD ARE+AE+RAE++R ERIS+KAGDGK+TLSSFASAVS  + +GLDLHQL I
Sbjct: 741  EFEVVGSLDIARERAEARAESLRQERISSKAGDGKVTLSSFASAVSGGSQSGLDLHQLNI 800

Query: 901  IMKVDLQGSIEAIRQAIQVLPQDNVTLKFLLQSTGDVSNSDVDLAVASKAIIFGFNVRAP 1080
            IMKVD+QGSIEA+RQA+QVLPQDNV LKFLLQ+TGD+S SD+DLAVASKAI+ GFNVRAP
Sbjct: 801  IMKVDVQGSIEAVRQALQVLPQDNVALKFLLQATGDISASDIDLAVASKAIVIGFNVRAP 860

Query: 1081 GSVKSYADNKGVEIRLYRVIYELIDDVRTAMEGLLEPVE 1197
            GSVKSYAD KGVEIRLY+VIY+LIDDVR AMEGLL+ VE
Sbjct: 861  GSVKSYADTKGVEIRLYKVIYDLIDDVRNAMEGLLDAVE 899


>emb|CBI21817.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  664 bits (1714), Expect = 0.0
 Identities = 338/399 (84%), Positives = 366/399 (91%)
 Frame = +1

Query: 1    KTTLLDHIQKTKVAASEAGGITQGIGAYKVQVPIDGKLRQCVFLDTPGHEAFGAMRARGA 180
            KTTLLDHI+K+KV ASEAGGITQGIGAYKV VPIDGK + CVFLDTPGHEAFGAMRARGA
Sbjct: 391  KTTLLDHIRKSKVTASEAGGITQGIGAYKVLVPIDGKPQSCVFLDTPGHEAFGAMRARGA 450

Query: 181  RITXXXXXXXXXXXGIRPQTNEAITHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL 360
            R+T           GIRPQTNEAI HAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL
Sbjct: 451  RVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL 510

Query: 361  MPEDWGGDIPMIQISALKGVNVDELLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKG 540
            MPEDWGGDIPM+QISALKG NVD+LLET+MLVAELQELKANP RNAKGTVIEAGLDKSKG
Sbjct: 511  MPEDWGGDIPMVQISALKGENVDDLLETIMLVAELQELKANPDRNAKGTVIEAGLDKSKG 570

Query: 541  PVATFIVQNGTLKRGDIVVCGEAFGKVRALFNDGGKRVDEAGPSLPIQVIGLNNVPFAGD 720
            PVATFIVQNGTLKRGDIVVCG AFGKVRALF+DGGKRVD AGPS+P+QVIGLNNVP AGD
Sbjct: 571  PVATFIVQNGTLKRGDIVVCGGAFGKVRALFDDGGKRVDAAGPSIPVQVIGLNNVPIAGD 630

Query: 721  EFEVVGSLDNAREKAESRAETIRNERISAKAGDGKITLSSFASAVSSRTHAGLDLHQLVI 900
            EFEVVGSLD ARE+AE+RAE++R ERIS+KAGDGK+TLSSFASAVS  + +GLDLHQL I
Sbjct: 631  EFEVVGSLDIARERAEARAESLRQERISSKAGDGKVTLSSFASAVSGGSQSGLDLHQLNI 690

Query: 901  IMKVDLQGSIEAIRQAIQVLPQDNVTLKFLLQSTGDVSNSDVDLAVASKAIIFGFNVRAP 1080
            IMKVD+QGSIEA+RQA+QVLPQDNV LKFLLQ+TGD+S SD+DLAVASKAI+ GFNVRAP
Sbjct: 691  IMKVDVQGSIEAVRQALQVLPQDNVALKFLLQATGDISASDIDLAVASKAIVIGFNVRAP 750

Query: 1081 GSVKSYADNKGVEIRLYRVIYELIDDVRTAMEGLLEPVE 1197
            GSVKSYAD KGVEIRLY+VIY+LIDDVR AMEGLL+ VE
Sbjct: 751  GSVKSYADTKGVEIRLYKVIYDLIDDVRNAMEGLLDAVE 789


>ref|XP_002532827.1| mitochondrial translational initiation factor, putative [Ricinus
            communis] gi|223527418|gb|EEF29557.1| mitochondrial
            translational initiation factor, putative [Ricinus
            communis]
          Length = 1033

 Score =  662 bits (1708), Expect = 0.0
 Identities = 333/399 (83%), Positives = 369/399 (92%)
 Frame = +1

Query: 1    KTTLLDHIQKTKVAASEAGGITQGIGAYKVQVPIDGKLRQCVFLDTPGHEAFGAMRARGA 180
            KTTLLD+I+K+KV ASEAGGITQGIGAYKV  P+DGK++ CVFLDTPGHEAFGAMRARGA
Sbjct: 519  KTTLLDYIRKSKVTASEAGGITQGIGAYKVLTPVDGKMQPCVFLDTPGHEAFGAMRARGA 578

Query: 181  RITXXXXXXXXXXXGIRPQTNEAITHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL 360
            R+T           GIRPQTNEAI HAKAAGVPIV+AINKIDKDGANPERVMQ+LSSIGL
Sbjct: 579  RVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVVAINKIDKDGANPERVMQDLSSIGL 638

Query: 361  MPEDWGGDIPMIQISALKGVNVDELLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKG 540
            MPEDWGGDIPM+QISALKG N+D+LLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKG
Sbjct: 639  MPEDWGGDIPMVQISALKGDNIDDLLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKG 698

Query: 541  PVATFIVQNGTLKRGDIVVCGEAFGKVRALFNDGGKRVDEAGPSLPIQVIGLNNVPFAGD 720
            P+ATFI+QNGTLKRGD+VVCGEAFGKVRALF+DGGKRVDEAGPS+P+QVIGL+NVP AGD
Sbjct: 699  PIATFIIQNGTLKRGDVVVCGEAFGKVRALFDDGGKRVDEAGPSIPVQVIGLSNVPKAGD 758

Query: 721  EFEVVGSLDNAREKAESRAETIRNERISAKAGDGKITLSSFASAVSSRTHAGLDLHQLVI 900
            EFE V SLD AREKAE+RAE +RNERI+AKAGDGKITLSS ASAVSS   +G+DLHQL I
Sbjct: 759  EFEAVASLDIAREKAEARAELLRNERITAKAGDGKITLSSLASAVSSGRLSGIDLHQLNI 818

Query: 901  IMKVDLQGSIEAIRQAIQVLPQDNVTLKFLLQSTGDVSNSDVDLAVASKAIIFGFNVRAP 1080
            I+KVD+QGS+EA+RQA+QVLPQDNVTLKFLLQ+TGDVS+SDVDLA+AS+AII GFNV+AP
Sbjct: 819  ILKVDVQGSVEAVRQALQVLPQDNVTLKFLLQATGDVSSSDVDLAIASEAIILGFNVKAP 878

Query: 1081 GSVKSYADNKGVEIRLYRVIYELIDDVRTAMEGLLEPVE 1197
            GSVKS A+NKGVEIRLYRVIY+LIDDVR AMEGLLEPVE
Sbjct: 879  GSVKSNAENKGVEIRLYRVIYDLIDDVRNAMEGLLEPVE 917


>ref|XP_003546780.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
            [Glycine max]
          Length = 1015

 Score =  654 bits (1687), Expect = 0.0
 Identities = 331/399 (82%), Positives = 366/399 (91%)
 Frame = +1

Query: 1    KTTLLDHIQKTKVAASEAGGITQGIGAYKVQVPIDGKLRQCVFLDTPGHEAFGAMRARGA 180
            KTTLLD+I+K+KVAASEAGGITQGIGAYKV+VP+DGK   CVFLDTPGHEAFGAMRARGA
Sbjct: 501  KTTLLDYIRKSKVAASEAGGITQGIGAYKVEVPVDGKNLPCVFLDTPGHEAFGAMRARGA 560

Query: 181  RITXXXXXXXXXXXGIRPQTNEAITHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGL 360
             +T           GIRPQTNEAI HAKAAGVPI+IAINKIDKDGANPERVMQELSSIGL
Sbjct: 561  SVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPERVMQELSSIGL 620

Query: 361  MPEDWGGDIPMIQISALKGVNVDELLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKG 540
            MPEDWGGDIPM+ ISALKG N+D+LLETVMLVAELQELKANP R+AKGTV+EAGLDKSKG
Sbjct: 621  MPEDWGGDIPMVPISALKGKNIDDLLETVMLVAELQELKANPDRSAKGTVVEAGLDKSKG 680

Query: 541  PVATFIVQNGTLKRGDIVVCGEAFGKVRALFNDGGKRVDEAGPSLPIQVIGLNNVPFAGD 720
            P A+FIVQNGTL+RGDIVVCGEAFGKVRALF+DGGKRVDEA PS+P+QVIGLNNVP AGD
Sbjct: 681  PFASFIVQNGTLRRGDIVVCGEAFGKVRALFDDGGKRVDEATPSIPVQVIGLNNVPIAGD 740

Query: 721  EFEVVGSLDNAREKAESRAETIRNERISAKAGDGKITLSSFASAVSSRTHAGLDLHQLVI 900
            EFEV+ SLD ARE+AE+RAE++RNERISAKAGDGK+TLSS ASAVSS   +GLDLHQL I
Sbjct: 741  EFEVIESLDTARERAETRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNI 800

Query: 901  IMKVDLQGSIEAIRQAIQVLPQDNVTLKFLLQSTGDVSNSDVDLAVASKAIIFGFNVRAP 1080
            I+KVDLQGSIEA+R+A+++LPQDNVTLKFLL++TGDVS SDVDLAVASKAII GFNV+AP
Sbjct: 801  ILKVDLQGSIEAVRKALEILPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVKAP 860

Query: 1081 GSVKSYADNKGVEIRLYRVIYELIDDVRTAMEGLLEPVE 1197
            GSVKSYA+NK VEIRLY+VIYELIDDVR AMEGLLEPVE
Sbjct: 861  GSVKSYAENKAVEIRLYKVIYELIDDVRNAMEGLLEPVE 899


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