BLASTX nr result

ID: Panax21_contig00001215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001215
         (1637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 ...   429   e-118
ref|XP_004143429.1| PREDICTED: lisH domain-containing protein C2...   400   e-109
gb|AFK25801.1| SymRK interaction E3 ligase [Lotus japonicus] gi|...   390   e-106
ref|XP_003516880.1| PREDICTED: protein RMD5 homolog A-like [Glyc...   389   e-105
ref|XP_002528898.1| Sporulation protein RMD5, putative [Ricinus ...   388   e-105

>ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 [Vitis vinifera]
            gi|359475593|ref|XP_003631711.1| PREDICTED: protein RMD5
            homolog A isoform 2 [Vitis vinifera]
            gi|296088090|emb|CBI35449.3| unnamed protein product
            [Vitis vinifera]
          Length = 383

 Score =  429 bits (1104), Expect = e-118
 Identities = 208/270 (77%), Positives = 234/270 (86%)
 Frame = -2

Query: 1636 IIASHFYRDGLFDIGDCFIDEACEPEYADKKSPFIEMYKILEAMKSRDLEPALNWASTNR 1457
            IIASHFYR GLFDIG+C I+EA EPE    KS F+EM++IL+AMK+RDLEPALNW S NR
Sbjct: 115  IIASHFYRQGLFDIGECLINEAGEPEDTALKSQFLEMFQILDAMKARDLEPALNWVSNNR 174

Query: 1456 EKLNQNGSDIELKLHRLQFMEILQKRGRDEALKYARKFLTPFAAVHMAEIQKLMACLLWA 1277
            EKL QNGS++ELKLHRLQF+EILQK GR +AL YAR +L PFA++HM EIQKLMACLLW 
Sbjct: 175  EKLKQNGSNLELKLHRLQFVEILQKGGRADALNYARTYLAPFASLHMDEIQKLMACLLWV 234

Query: 1276 GRLDSSPYSELLSLNHWEKLAEELSRQFCNLLGQSYESPLSVTIAAGVQGLPTLLKLMNV 1097
            GRLDSSPYSEL+  + WEKLAEEL+RQFC+LLGQSYESPLSV IAAG++GLPTLLKL NV
Sbjct: 235  GRLDSSPYSELMVPSLWEKLAEELTRQFCSLLGQSYESPLSVAIAAGIEGLPTLLKLANV 294

Query: 1096 MTGKQQEWQSMKHLPVPVDLGRELQFHSVFVCPVSRDQASEENPPMLLSCGHVLCKQSIT 917
            M  K+QEWQ+MK LPVPVDLGRE QFHS+FVCPVSRDQ SEENPPML+ CGHVLCKQSI 
Sbjct: 295  MAAKKQEWQAMKQLPVPVDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIM 354

Query: 916  KLSKNNSTRRFKCPYCPSEVEVAQCRQLYF 827
            KLSK +STR FKCPYCP+E  V QC QLYF
Sbjct: 355  KLSK-SSTRMFKCPYCPNESTVGQCMQLYF 383


>ref|XP_004143429.1| PREDICTED: lisH domain-containing protein C29A3.03c-like [Cucumis
            sativus] gi|449499826|ref|XP_004160927.1| PREDICTED: lisH
            domain-containing protein C29A3.03c-like [Cucumis
            sativus]
          Length = 388

 Score =  400 bits (1028), Expect = e-109
 Identities = 194/273 (71%), Positives = 228/273 (83%), Gaps = 3/273 (1%)
 Frame = -2

Query: 1636 IIASHFYRDGLFDIGDCFIDEACEPEYADK-KSPFIEMYKILEAMKSRDLEPALNWASTN 1460
            IIASHFYR G+F++GDCFI EA E E A   +SPF EMY+ILE+MKSR+LEPALNWA  N
Sbjct: 117  IIASHFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNN 176

Query: 1459 REKLNQNGSDIELKLHRLQFMEILQKRGRDEALKYARKFLTPFAAVHMAEIQKLMACLLW 1280
              KL   GSD+ LKLH +QFMEILQK  R +ALKYAR +L P A+ HMAE+QKLMACLLW
Sbjct: 177  SNKLKDCGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLW 236

Query: 1279 AGRLDSSPYS--ELLSLNHWEKLAEELSRQFCNLLGQSYESPLSVTIAAGVQGLPTLLKL 1106
             GRLD SPYS  +LLS+ +W+K+AEEL RQFCN LGQSYESPL VT+AAGVQGLP LLK 
Sbjct: 237  TGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKF 296

Query: 1105 MNVMTGKQQEWQSMKHLPVPVDLGRELQFHSVFVCPVSRDQASEENPPMLLSCGHVLCKQ 926
            MNVM GK+QEWQSMK LPVPV+L RE QFHS+FVCPVS++Q++EENPPML+ CGHVLCKQ
Sbjct: 297  MNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQ 356

Query: 925  SITKLSKNNSTRRFKCPYCPSEVEVAQCRQLYF 827
            SI K+SK NST+ FKCPYCP++++  +CRQLYF
Sbjct: 357  SIMKMSK-NSTKSFKCPYCPTDIDATRCRQLYF 388


>gb|AFK25801.1| SymRK interaction E3 ligase [Lotus japonicus]
            gi|407080720|gb|AFS89616.1| SIE3 [Lotus japonicus]
          Length = 386

 Score =  390 bits (1002), Expect = e-106
 Identities = 188/271 (69%), Positives = 228/271 (84%), Gaps = 1/271 (0%)
 Frame = -2

Query: 1636 IIASHFYRDGLFDIGDCFIDEACEPEYAD-KKSPFIEMYKILEAMKSRDLEPALNWASTN 1460
            IIA+HFYR GLF+IGD F+    EPE A   KSPF+EMY+ILEAMK++DLEPAL WA++N
Sbjct: 117  IIANHFYRQGLFEIGDHFLSVVGEPESAAVMKSPFLEMYQILEAMKNQDLEPALKWATSN 176

Query: 1459 REKLNQNGSDIELKLHRLQFMEILQKRGRDEALKYARKFLTPFAAVHMAEIQKLMACLLW 1280
             +KL Q+GSDI LKLH +QF++ILQ   RDEAL YAR +L+PFA+ H+A+IQKLM  LLW
Sbjct: 177  SDKLAQSGSDIVLKLHSMQFVKILQNGSRDEALHYARTYLSPFASSHIADIQKLMGSLLW 236

Query: 1279 AGRLDSSPYSELLSLNHWEKLAEELSRQFCNLLGQSYESPLSVTIAAGVQGLPTLLKLMN 1100
             G+LDSSPY  LLS ++W++LAEEL RQFCNLLGQSY SPLSVTI+AGVQ LP LLK MN
Sbjct: 237  TGKLDSSPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVTISAGVQALPPLLKFMN 296

Query: 1099 VMTGKQQEWQSMKHLPVPVDLGRELQFHSVFVCPVSRDQASEENPPMLLSCGHVLCKQSI 920
            VM GK+QEWQ+M  LPVPV+L  ELQFHS+FVCPVS++QA+E+NPPML+SCGHVLCKQSI
Sbjct: 297  VMVGKKQEWQTMNQLPVPVELDSELQFHSIFVCPVSKEQATEDNPPMLMSCGHVLCKQSI 356

Query: 919  TKLSKNNSTRRFKCPYCPSEVEVAQCRQLYF 827
            +K+SKN S + FKCPYCP +V+ A C+QLYF
Sbjct: 357  SKMSKNGS-KLFKCPYCPFDVDAALCKQLYF 386


>ref|XP_003516880.1| PREDICTED: protein RMD5 homolog A-like [Glycine max]
          Length = 386

 Score =  389 bits (999), Expect = e-105
 Identities = 187/271 (69%), Positives = 224/271 (82%), Gaps = 1/271 (0%)
 Frame = -2

Query: 1636 IIASHFYRDGLFDIGDCFIDEACEPEYAD-KKSPFIEMYKILEAMKSRDLEPALNWASTN 1460
            IIA+HFY  GLF+IGD F+    EPE A   K PF+EMY+ILEAM++++LEPALNWASTN
Sbjct: 117  IIANHFYHQGLFEIGDHFMSVVGEPESAAIMKFPFVEMYQILEAMQNQNLEPALNWASTN 176

Query: 1459 REKLNQNGSDIELKLHRLQFMEILQKRGRDEALKYARKFLTPFAAVHMAEIQKLMACLLW 1280
             +KL Q+GSDI LKLH +QF+++LQ   R+EAL YAR  L+PFA  HM +IQKLM CLLW
Sbjct: 177  GDKLAQSGSDIVLKLHSMQFVKVLQNGSREEALHYARMHLSPFATSHMTDIQKLMGCLLW 236

Query: 1279 AGRLDSSPYSELLSLNHWEKLAEELSRQFCNLLGQSYESPLSVTIAAGVQGLPTLLKLMN 1100
             G+LD SPY  LLS ++W+KLAEEL RQFCNLLGQSY SPLSVT+AAGVQ LP LLK MN
Sbjct: 237  TGKLDRSPYHALLSPSNWDKLAEELKRQFCNLLGQSYNSPLSVTVAAGVQVLPPLLKFMN 296

Query: 1099 VMTGKQQEWQSMKHLPVPVDLGRELQFHSVFVCPVSRDQASEENPPMLLSCGHVLCKQSI 920
            VM GK+ EWQSM  LPVPV+L RE QFHS+FVCPVS++QA+E+NPPML+SCGHVLCKQSI
Sbjct: 297  VMAGKKNEWQSMNQLPVPVELDREFQFHSIFVCPVSKEQATEDNPPMLMSCGHVLCKQSI 356

Query: 919  TKLSKNNSTRRFKCPYCPSEVEVAQCRQLYF 827
             K+SK NST+ FKCPYCP +++ AQC+QLYF
Sbjct: 357  LKMSK-NSTKVFKCPYCPFDIDAAQCKQLYF 386


>ref|XP_002528898.1| Sporulation protein RMD5, putative [Ricinus communis]
            gi|223531652|gb|EEF33478.1| Sporulation protein RMD5,
            putative [Ricinus communis]
          Length = 333

 Score =  388 bits (996), Expect = e-105
 Identities = 188/271 (69%), Positives = 225/271 (83%), Gaps = 1/271 (0%)
 Frame = -2

Query: 1636 IIASHFYRDGLFDIGDCFIDEACEPEY-ADKKSPFIEMYKILEAMKSRDLEPALNWASTN 1460
            IIA HFYR GLF IGDCFI+EA EPE  A  +SPF EMY ILEAMK R+LEPAL WA+ N
Sbjct: 65   IIAGHFYRQGLFSIGDCFINEAKEPESTAAMRSPFSEMYIILEAMKDRNLEPALKWAAAN 124

Query: 1459 REKLNQNGSDIELKLHRLQFMEILQKRGRDEALKYARKFLTPFAAVHMAEIQKLMACLLW 1280
             +KL ++GSD++LKLHRLQF+EILQ   R +AL Y R  +TPFA+    EIQKLMACLL+
Sbjct: 125  SDKLKESGSDLQLKLHRLQFVEILQNGSRSDALTYVRTHITPFASSSFGEIQKLMACLLY 184

Query: 1279 AGRLDSSPYSELLSLNHWEKLAEELSRQFCNLLGQSYESPLSVTIAAGVQGLPTLLKLMN 1100
            AG+LD SPY+ELLS  +W  +AEEL+RQFCNLLGQS+ESPLSVTIAAG QGLP LLK M 
Sbjct: 185  AGKLDRSPYAELLSAANWNIVAEELTRQFCNLLGQSFESPLSVTIAAGFQGLPPLLKFMT 244

Query: 1099 VMTGKQQEWQSMKHLPVPVDLGRELQFHSVFVCPVSRDQASEENPPMLLSCGHVLCKQSI 920
            +M GK+QEWQ+MK  PVPV+L RE QFHS+FVCPVS++Q+++ENPPML+SCGHVLCKQSI
Sbjct: 245  LMAGKKQEWQTMKQ-PVPVELNREFQFHSIFVCPVSKEQSTDENPPMLMSCGHVLCKQSI 303

Query: 919  TKLSKNNSTRRFKCPYCPSEVEVAQCRQLYF 827
             K+SK NST+ FKCPYCPS+++  QCRQL+F
Sbjct: 304  NKMSK-NSTKTFKCPYCPSDIDATQCRQLHF 333


Top