BLASTX nr result

ID: Panax21_contig00001203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001203
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540849.1| PREDICTED: traB domain-containing protein-li...   130   2e-28
ref|XP_004166532.1| PREDICTED: traB domain-containing protein-li...   128   1e-27
ref|XP_004151877.1| PREDICTED: traB domain-containing protein-li...   128   1e-27
ref|XP_002280408.1| PREDICTED: traB domain-containing protein is...   127   1e-27
ref|XP_002310462.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27

>ref|XP_003540849.1| PREDICTED: traB domain-containing protein-like [Glycine max]
          Length = 403

 Score =  130 bits (327), Expect = 2e-28
 Identities = 62/71 (87%), Positives = 67/71 (94%)
 Frame = -1

Query: 643 ITLRRTWGKMPLWHKTKLLYSLVFQAVFLPSPEHLNQMLKDMDDVDMLTLVIQEMSKEFP 464
           ITLRRTW KMPLWHKTKLLYSL+FQAVFLPS + LN+MLK+MDD DMLTLVIQEMSKEFP
Sbjct: 253 ITLRRTWSKMPLWHKTKLLYSLLFQAVFLPSSDDLNKMLKEMDDSDMLTLVIQEMSKEFP 312

Query: 463 TVMETLVHERD 431
           T+METLVHERD
Sbjct: 313 TLMETLVHERD 323


>ref|XP_004166532.1| PREDICTED: traB domain-containing protein-like [Cucumis sativus]
          Length = 415

 Score =  128 bits (321), Expect = 1e-27
 Identities = 61/79 (77%), Positives = 66/79 (83%)
 Frame = -1

Query: 643 ITLRRTWGKMPLWHKTKLLYSLVFQAVFLPSPEHLNQMLKDMDDVDMLTLVIQEMSKEFP 464
           IT+RR W KMPLWHK KLLYS VFQA FLPSPE L +MLKDMDDVDMLTL+IQEMSKEFP
Sbjct: 266 ITIRRAWAKMPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFP 325

Query: 463 TVMETLVHERDNLGMILLL 407
           T+M+TLVHERD      LL
Sbjct: 326 TLMDTLVHERDRYMSTTLL 344


>ref|XP_004151877.1| PREDICTED: traB domain-containing protein-like [Cucumis sativus]
          Length = 415

 Score =  128 bits (321), Expect = 1e-27
 Identities = 61/79 (77%), Positives = 66/79 (83%)
 Frame = -1

Query: 643 ITLRRTWGKMPLWHKTKLLYSLVFQAVFLPSPEHLNQMLKDMDDVDMLTLVIQEMSKEFP 464
           IT+RR W KMPLWHK KLLYS VFQA FLPSPE L +MLKDMDDVDMLTL+IQEMSKEFP
Sbjct: 266 ITIRRAWAKMPLWHKIKLLYSFVFQAFFLPSPEELTKMLKDMDDVDMLTLIIQEMSKEFP 325

Query: 463 TVMETLVHERDNLGMILLL 407
           T+M+TLVHERD      LL
Sbjct: 326 TLMDTLVHERDRYMSTTLL 344


>ref|XP_002280408.1| PREDICTED: traB domain-containing protein isoform 1 [Vitis
           vinifera] gi|297739309|emb|CBI28960.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  127 bits (320), Expect = 1e-27
 Identities = 61/79 (77%), Positives = 68/79 (86%)
 Frame = -1

Query: 643 ITLRRTWGKMPLWHKTKLLYSLVFQAVFLPSPEHLNQMLKDMDDVDMLTLVIQEMSKEFP 464
           ITLRRTWGKMPLWHK KLLY++ FQA FLPS E LN+M+K+MD+VDMLTLVIQEMSKEFP
Sbjct: 283 ITLRRTWGKMPLWHKAKLLYTITFQAFFLPSQEDLNKMMKEMDNVDMLTLVIQEMSKEFP 342

Query: 463 TVMETLVHERDNLGMILLL 407
           T+METLVHERD      LL
Sbjct: 343 TLMETLVHERDQFMSSTLL 361


>ref|XP_002310462.1| predicted protein [Populus trichocarpa] gi|222853365|gb|EEE90912.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  127 bits (319), Expect = 2e-27
 Identities = 59/71 (83%), Positives = 68/71 (95%)
 Frame = -1

Query: 643 ITLRRTWGKMPLWHKTKLLYSLVFQAVFLPSPEHLNQMLKDMDDVDMLTLVIQEMSKEFP 464
           ITL+RTWGKMPLWHK KLLYSL+FQA+FLPS E L++MLK+MDDVDMLTLVIQEMSK+FP
Sbjct: 140 ITLQRTWGKMPLWHKVKLLYSLLFQALFLPSSEDLDKMLKEMDDVDMLTLVIQEMSKQFP 199

Query: 463 TVMETLVHERD 431
           T+M+TLVHERD
Sbjct: 200 TLMDTLVHERD 210


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