BLASTX nr result

ID: Panax21_contig00001138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001138
         (1633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase...   714   0.0  
ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase...   707   0.0  
emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]   706   0.0  
ref|XP_002532996.1| Ribulose bisphosphate carboxylase/oxygenase ...   702   0.0  
ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase...   707   0.0  

>ref|XP_002270571.2| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1,
            chloroplastic-like [Vitis vinifera]
            gi|297740331|emb|CBI30513.3| unnamed protein product
            [Vitis vinifera]
          Length = 474

 Score =  714 bits (1842), Expect(2) = 0.0
 Identities = 344/413 (83%), Positives = 380/413 (92%)
 Frame = -2

Query: 1632 GTYVPSSSFFDNSMKKLSLNGTSSKISCGYFKVVAEVDEEKQTTKDKWRGLAFDVSDDQQ 1453
            G  VPSS+F  NS+KK+S      + S G FKVVAEVDEEKQT+KDKW+GLAFD SDDQQ
Sbjct: 24   GASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQQ 83

Query: 1452 DITRGKGMVDSLFQAPINSGTHTAVMSSYDYFSVGIRQYNMDNNFDGFYIAPSFMDKVVV 1273
            DITRGKGMVDSLFQAP++SGTH AVMSSYDY S G+RQYN+DN  DGFYIAP+FMDK+VV
Sbjct: 84   DITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVV 143

Query: 1272 HISKNFMTLPNIKIPLILGVWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPA 1093
            HI+KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGI+PIMMSAGELESGNAGEPA
Sbjct: 144  HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPA 203

Query: 1092 KLIRQRYREAADIIKKGKMCVLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTN 913
            KLIRQRYREAADII+KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPTN
Sbjct: 204  KLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTN 263

Query: 912  VQLPGMYNKQENPRVPLIVTGNDFSTLYAPLIRDGRMEKLYWAPTREDRIGVCTAIFRSD 733
            VQLPGMYNK+ENPRVP+IVTGNDFSTLYAPLIRDGRMEK YWAPTREDRIGVCT IFRSD
Sbjct: 264  VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRSD 323

Query: 732  NVPKQDIVQLVDTFQGQSIDFFGAIRARVYDDEIRKFVSGIGVENVGKRLVNSKEGPPNV 553
            N+PK+D+V+LVDTF GQSIDFFGA+RARVYDDE+RK+V+ +GVE +GK+LVNSKEGPP  
Sbjct: 324  NIPKEDMVKLVDTFPGQSIDFFGALRARVYDDEVRKWVASVGVEGIGKKLVNSKEGPPTF 383

Query: 552  EQPKMTQGKLLKYGNMLVQEQENVKRVQLADKYLREAALGDANDDAVNRETFY 394
            E+PKMT  KLL+YGNMLVQEQENVKRVQLADKYL EAALGDAN+DA+   +FY
Sbjct: 384  EKPKMTLDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANEDAIKSGSFY 436



 Score = 32.3 bits (72), Expect(2) = 0.0
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -1

Query: 349 GKAAQQVNLPVPEG 308
           GKAAQQVNLPVPEG
Sbjct: 437 GKAAQQVNLPVPEG 450


>ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
            chloroplastic isoform 1 [Vitis vinifera]
            gi|297746032|emb|CBI16088.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  707 bits (1824), Expect(2) = 0.0
 Identities = 340/413 (82%), Positives = 378/413 (91%)
 Frame = -2

Query: 1632 GTYVPSSSFFDNSMKKLSLNGTSSKISCGYFKVVAEVDEEKQTTKDKWRGLAFDVSDDQQ 1453
            G  VPSS+FF +S+KK+S   T  KI+ G FKVVAE+DE +QT KD+W+GLA+DVSDDQQ
Sbjct: 24   GASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQQ 83

Query: 1452 DITRGKGMVDSLFQAPINSGTHTAVMSSYDYFSVGIRQYNMDNNFDGFYIAPSFMDKVVV 1273
            DITRGKGMVDSLFQAP+ SGTH AVMSSY+Y S G+RQYN+DNN DGFYIAP+FMDK+VV
Sbjct: 84   DITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLVV 143

Query: 1272 HISKNFMTLPNIKIPLILGVWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPA 1093
            HI+KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVF+KMGI+PIMMSAGELESGNAGEPA
Sbjct: 144  HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPA 203

Query: 1092 KLIRQRYREAADIIKKGKMCVLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTN 913
            KLIRQRYREAADII+KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPTN
Sbjct: 204  KLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTN 263

Query: 912  VQLPGMYNKQENPRVPLIVTGNDFSTLYAPLIRDGRMEKLYWAPTREDRIGVCTAIFRSD 733
            VQLPGMYNK+ENPRVP+IVTGNDFSTLYAPLIRDGRMEK YWAP REDRIGVC  IFRSD
Sbjct: 264  VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPNREDRIGVCKGIFRSD 323

Query: 732  NVPKQDIVQLVDTFQGQSIDFFGAIRARVYDDEIRKFVSGIGVENVGKRLVNSKEGPPNV 553
            NVP  DIV++VDTF GQSIDFFGA+RARVYDDE+RK++SG+GV+ +GK+LVNSKEGPP  
Sbjct: 324  NVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDFIGKKLVNSKEGPPTF 383

Query: 552  EQPKMTQGKLLKYGNMLVQEQENVKRVQLADKYLREAALGDANDDAVNRETFY 394
            EQPKMT  KLL+YGNMLV EQENVKRVQLADKYL EAALGDAN D++ R TFY
Sbjct: 384  EQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLSEAALGDANVDSIERGTFY 436



 Score = 28.9 bits (63), Expect(2) = 0.0
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 349 GKAAQQVNLPVPEG 308
           GKAAQQV +PVPEG
Sbjct: 437 GKAAQQVGVPVPEG 450


>emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]
          Length = 472

 Score =  706 bits (1823), Expect(2) = 0.0
 Identities = 340/413 (82%), Positives = 378/413 (91%)
 Frame = -2

Query: 1632 GTYVPSSSFFDNSMKKLSLNGTSSKISCGYFKVVAEVDEEKQTTKDKWRGLAFDVSDDQQ 1453
            G  VPSS+FF +S+KK+S   T  KI+ G FKVVAE+DE +QT KD+W+GLA+DVSDDQQ
Sbjct: 24   GXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQQ 83

Query: 1452 DITRGKGMVDSLFQAPINSGTHTAVMSSYDYFSVGIRQYNMDNNFDGFYIAPSFMDKVVV 1273
            DITRGKGMVDSLFQAP+ SGTH AVMSSY+Y S G+RQYN+DNN DGFYIAP+FMDK+VV
Sbjct: 84   DITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLVV 143

Query: 1272 HISKNFMTLPNIKIPLILGVWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPA 1093
            HI+KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVF+KMGI+PIMMSAGELESGNAGEPA
Sbjct: 144  HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPA 203

Query: 1092 KLIRQRYREAADIIKKGKMCVLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTN 913
            KLIRQRYREAADII+KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPTN
Sbjct: 204  KLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTN 263

Query: 912  VQLPGMYNKQENPRVPLIVTGNDFSTLYAPLIRDGRMEKLYWAPTREDRIGVCTAIFRSD 733
            VQLPGMYNK+ENPRVP+IVTGNDFSTLYAPLIRDGRMEK YWAP REDRIGVC  IFRSD
Sbjct: 264  VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPNREDRIGVCKGIFRSD 323

Query: 732  NVPKQDIVQLVDTFQGQSIDFFGAIRARVYDDEIRKFVSGIGVENVGKRLVNSKEGPPNV 553
            NVP  DIV++VDTF GQSIDFFGA+RARVYDDE+RK++SG+GV+ +GK+LVNSKEGPP  
Sbjct: 324  NVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDFIGKKLVNSKEGPPTF 383

Query: 552  EQPKMTQGKLLKYGNMLVQEQENVKRVQLADKYLREAALGDANDDAVNRETFY 394
            EQPKMT  KLL+YGNMLV EQENVKRVQLADKYL EAALGDAN D++ R TFY
Sbjct: 384  EQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLSEAALGDANVDSIERGTFY 436



 Score = 28.9 bits (63), Expect(2) = 0.0
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 349 GKAAQQVNLPVPEG 308
           GKAAQQV +PVPEG
Sbjct: 437 GKAAQQVGVPVPEG 450


>ref|XP_002532996.1| Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast
            precursor, putative [Ricinus communis]
            gi|223527225|gb|EEF29388.1| Ribulose bisphosphate
            carboxylase/oxygenase activase 1, chloroplast precursor,
            putative [Ricinus communis]
          Length = 474

 Score =  702 bits (1811), Expect(2) = 0.0
 Identities = 340/413 (82%), Positives = 376/413 (91%)
 Frame = -2

Query: 1632 GTYVPSSSFFDNSMKKLSLNGTSSKISCGYFKVVAEVDEEKQTTKDKWRGLAFDVSDDQQ 1453
            G  VPS++FF +S+KK++      KI  G  KV AE DE+KQT KD+W GLA+D+SDDQQ
Sbjct: 24   GPSVPSTAFFGSSLKKVNSKIIHQKILSGNLKVSAEYDEQKQTDKDRWGGLAYDISDDQQ 83

Query: 1452 DITRGKGMVDSLFQAPINSGTHTAVMSSYDYFSVGIRQYNMDNNFDGFYIAPSFMDKVVV 1273
            DITRGKGMVDSLFQAP+ +GTH AVMSSYDY S G+RQYN+DNN DGFYIAP+FMDKVVV
Sbjct: 84   DITRGKGMVDSLFQAPMGTGTHYAVMSSYDYLSQGLRQYNLDNNMDGFYIAPAFMDKVVV 143

Query: 1272 HISKNFMTLPNIKIPLILGVWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPA 1093
            HI+KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVFAKMGI+PIMMSAGELESGNAGEPA
Sbjct: 144  HITKNFLNLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPA 203

Query: 1092 KLIRQRYREAADIIKKGKMCVLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTN 913
            KLIRQRYREAADII+KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPTN
Sbjct: 204  KLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTN 263

Query: 912  VQLPGMYNKQENPRVPLIVTGNDFSTLYAPLIRDGRMEKLYWAPTREDRIGVCTAIFRSD 733
            VQLPGMYNK+ENPRVP+IVTGNDFSTLYAPLIRDGRMEK YWAPTREDRIGVCT IFR+D
Sbjct: 264  VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTD 323

Query: 732  NVPKQDIVQLVDTFQGQSIDFFGAIRARVYDDEIRKFVSGIGVENVGKRLVNSKEGPPNV 553
            NVPK+DIV+LVDTF GQSIDFFGAIRARVYDDE+R ++S IGVENVGKRLVNSKE PP  
Sbjct: 324  NVPKEDIVKLVDTFPGQSIDFFGAIRARVYDDEVRAWISTIGVENVGKRLVNSKEAPPTF 383

Query: 552  EQPKMTQGKLLKYGNMLVQEQENVKRVQLADKYLREAALGDANDDAVNRETFY 394
            EQPKMT  KLL+YG+MLV+EQENVKRVQLADKYL+EAALGDANDDA+   +FY
Sbjct: 384  EQPKMTLDKLLEYGSMLVKEQENVKRVQLADKYLKEAALGDANDDAIQNGSFY 436



 Score = 28.9 bits (63), Expect(2) = 0.0
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 349 GKAAQQVNLPVPEG 308
           GKAAQQV +PVPEG
Sbjct: 437 GKAAQQVKVPVPEG 450


>ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
            chloroplastic isoform 2 [Vitis vinifera]
          Length = 440

 Score =  707 bits (1824), Expect = 0.0
 Identities = 340/413 (82%), Positives = 378/413 (91%)
 Frame = -2

Query: 1632 GTYVPSSSFFDNSMKKLSLNGTSSKISCGYFKVVAEVDEEKQTTKDKWRGLAFDVSDDQQ 1453
            G  VPSS+FF +S+KK+S   T  KI+ G FKVVAE+DE +QT KD+W+GLA+DVSDDQQ
Sbjct: 24   GASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQQ 83

Query: 1452 DITRGKGMVDSLFQAPINSGTHTAVMSSYDYFSVGIRQYNMDNNFDGFYIAPSFMDKVVV 1273
            DITRGKGMVDSLFQAP+ SGTH AVMSSY+Y S G+RQYN+DNN DGFYIAP+FMDK+VV
Sbjct: 84   DITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLVV 143

Query: 1272 HISKNFMTLPNIKIPLILGVWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPA 1093
            HI+KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVF+KMGI+PIMMSAGELESGNAGEPA
Sbjct: 144  HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPA 203

Query: 1092 KLIRQRYREAADIIKKGKMCVLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTN 913
            KLIRQRYREAADII+KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPTN
Sbjct: 204  KLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTN 263

Query: 912  VQLPGMYNKQENPRVPLIVTGNDFSTLYAPLIRDGRMEKLYWAPTREDRIGVCTAIFRSD 733
            VQLPGMYNK+ENPRVP+IVTGNDFSTLYAPLIRDGRMEK YWAP REDRIGVC  IFRSD
Sbjct: 264  VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPNREDRIGVCKGIFRSD 323

Query: 732  NVPKQDIVQLVDTFQGQSIDFFGAIRARVYDDEIRKFVSGIGVENVGKRLVNSKEGPPNV 553
            NVP  DIV++VDTF GQSIDFFGA+RARVYDDE+RK++SG+GV+ +GK+LVNSKEGPP  
Sbjct: 324  NVPDDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDFIGKKLVNSKEGPPTF 383

Query: 552  EQPKMTQGKLLKYGNMLVQEQENVKRVQLADKYLREAALGDANDDAVNRETFY 394
            EQPKMT  KLL+YGNMLV EQENVKRVQLADKYL EAALGDAN D++ R TFY
Sbjct: 384  EQPKMTIEKLLEYGNMLVMEQENVKRVQLADKYLSEAALGDANVDSIERGTFY 436


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