BLASTX nr result

ID: Panax21_contig00001121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001121
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]      239   2e-82
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [...   232   2e-80
emb|CBI19489.3| unnamed protein product [Vitis vinifera]              232   2e-80
ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-l...   222   6e-79
ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...   222   6e-79

>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
          Length = 658

 Score =  239 bits (610), Expect(2) = 2e-82
 Identities = 127/199 (63%), Positives = 144/199 (72%)
 Frame = +3

Query: 3   ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182
           +RDS +SKTKFNN+YVKN+S+ST+E+DL+ TFGEYGTITSVVVMRD              
Sbjct: 208 DRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFE 267

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362
                                               RE+ELK+RFEQT KEQVDK+QGVN
Sbjct: 268 NPEDAAKAVDALNGKKFDDKEWYVGKAQKKSE----REVELKSRFEQTVKEQVDKYQGVN 323

Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542
           LY+KNLDDTIDD+KLKELFS++G+I SCKVMRDPSGISRGSGFVAFSTPEEASRAL EMN
Sbjct: 324 LYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMN 383

Query: 543 GKMIVSKPLYVALAQRKED 599
           GKMIVSKPLYVALAQRKE+
Sbjct: 384 GKMIVSKPLYVALAQRKEE 402



 Score = 94.4 bits (233), Expect(2) = 2e-82
 Identities = 41/47 (87%), Positives = 43/47 (91%)
 Frame = +1

Query: 685 PGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825
           PG+GQQLFYGQ PPAMI  QAGFGYQQQLVPGMRPG GPMPNFF+PM
Sbjct: 435 PGMGQQLFYGQAPPAMIAPQAGFGYQQQLVPGMRPGGGPMPNFFMPM 481



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = +3

Query: 312 RFEQTAKEQVDKFQGV-NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSG 488
           R   + ++  D+  G  N++IKNLD +ID   L E FS FG+I SCK+  D SG S+G G
Sbjct: 112 RVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYG 171

Query: 489 FVAFSTPEEASRALAEMNGKMIVSKPLYVALAQRKED 599
           FV + + E A  A+ ++NG ++  K +YV +  RK+D
Sbjct: 172 FVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQD 208



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 37/94 (39%), Positives = 58/94 (61%)
 Frame = +3

Query: 318 EQTAKEQVDKFQGVNLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVA 497
           +Q    ++ K +  N+Y+KNL D+  +D L++ F ++G+I S  VMRD  G S+  GFV 
Sbjct: 206 KQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVN 265

Query: 498 FSTPEEASRALAEMNGKMIVSKPLYVALAQRKED 599
           F  PE+A++A+  +NGK    K  YV  AQ+K +
Sbjct: 266 FENPEDAAKAVDALNGKKFDDKEWYVGKAQKKSE 299


>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147773643|emb|CAN76464.1| hypothetical protein
           VITISV_017035 [Vitis vinifera]
          Length = 640

 Score =  232 bits (591), Expect(2) = 2e-80
 Identities = 127/199 (63%), Positives = 139/199 (69%)
 Frame = +3

Query: 3   ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182
           ER++ ++KTKFNNVYVKN+SESTTEEDLKN FGE+G ITSVVVMRD              
Sbjct: 186 ERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFE 245

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362
                                               RELELK RFEQ+ KE VDKFQGVN
Sbjct: 246 NADDAAEAVEALNGKKFDEKEWYVGKAQKKYE----RELELKGRFEQSMKEVVDKFQGVN 301

Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542
           LYIKNLDD+I DDKLKELFS+FG+I SCKVMRDPSGISRGSGFVAFST EEASRAL EMN
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361

Query: 543 GKMIVSKPLYVALAQRKED 599
           GKM+VSKPLYVALAQRKE+
Sbjct: 362 GKMVVSKPLYVALAQRKEE 380



 Score = 94.7 bits (234), Expect(2) = 2e-80
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +1

Query: 685 PGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825
           PG+GQQLFYGQGPPA+IP QAGFGYQQQLVPGMRPG  PMPNFF+P+
Sbjct: 413 PGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPL 459



 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = +3

Query: 360 NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 539
           N++IKNLD +ID+  L + FS FG+I SCK+  DPSG S+G GFV F   E A  A+ ++
Sbjct: 107 NIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKL 166

Query: 540 NGKMIVSKPLYVALAQRKED 599
           NG +I  K +YV    RK++
Sbjct: 167 NGMLINDKQVYVGQFLRKQE 186



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 35/92 (38%), Positives = 55/92 (59%)
 Frame = +3

Query: 318 EQTAKEQVDKFQGVNLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVA 497
           +Q  +  ++K +  N+Y+KNL ++  ++ LK +F +FG I S  VMRD  G S+  GFV 
Sbjct: 184 KQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVN 243

Query: 498 FSTPEEASRALAEMNGKMIVSKPLYVALAQRK 593
           F   ++A+ A+  +NGK    K  YV  AQ+K
Sbjct: 244 FENADDAAEAVEALNGKKFDEKEWYVGKAQKK 275


>emb|CBI19489.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  232 bits (591), Expect(2) = 2e-80
 Identities = 127/199 (63%), Positives = 139/199 (69%)
 Frame = +3

Query: 3   ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182
           ER++ ++KTKFNNVYVKN+SESTTEEDLKN FGE+G ITSVVVMRD              
Sbjct: 186 ERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFE 245

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362
                                               RELELK RFEQ+ KE VDKFQGVN
Sbjct: 246 NADDAAEAVEALNGKKFDEKEWYVGKAQKKYE----RELELKGRFEQSMKEVVDKFQGVN 301

Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542
           LYIKNLDD+I DDKLKELFS+FG+I SCKVMRDPSGISRGSGFVAFST EEASRAL EMN
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361

Query: 543 GKMIVSKPLYVALAQRKED 599
           GKM+VSKPLYVALAQRKE+
Sbjct: 362 GKMVVSKPLYVALAQRKEE 380



 Score = 94.7 bits (234), Expect(2) = 2e-80
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +1

Query: 685 PGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825
           PG+GQQLFYGQGPPA+IP QAGFGYQQQLVPGMRPG  PMPNFF+P+
Sbjct: 413 PGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPL 459



 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = +3

Query: 360 NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 539
           N++IKNLD +ID+  L + FS FG+I SCK+  DPSG S+G GFV F   E A  A+ ++
Sbjct: 107 NIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKL 166

Query: 540 NGKMIVSKPLYVALAQRKED 599
           NG +I  K +YV    RK++
Sbjct: 167 NGMLINDKQVYVGQFLRKQE 186



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 35/92 (38%), Positives = 55/92 (59%)
 Frame = +3

Query: 318 EQTAKEQVDKFQGVNLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVA 497
           +Q  +  ++K +  N+Y+KNL ++  ++ LK +F +FG I S  VMRD  G S+  GFV 
Sbjct: 184 KQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVN 243

Query: 498 FSTPEEASRALAEMNGKMIVSKPLYVALAQRK 593
           F   ++A+ A+  +NGK    K  YV  AQ+K
Sbjct: 244 FENADDAAEAVEALNGKKFDEKEWYVGKAQKK 275


>ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 654

 Score =  222 bits (566), Expect(2) = 6e-79
 Identities = 118/199 (59%), Positives = 135/199 (67%)
 Frame = +3

Query: 3   ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182
           ERD V+ K+KFNNV+VKN+SE+TTEEDL   F E+GT+TS+VVMRD              
Sbjct: 197 ERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFE 256

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362
                                               RE+ELK+RFEQT KE  DK+QG N
Sbjct: 257 NADDAARAVDTLNGKLVDDKEWYVGKAQKKSE----REVELKHRFEQTMKEAADKYQGAN 312

Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542
           LYIKNLDD+I DDKLKELF+ FG+I SCKVMRDP+GISRGSGFVAFSTP+EASRAL EMN
Sbjct: 313 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 372

Query: 543 GKMIVSKPLYVALAQRKED 599
           GKM+VSKPLYVALAQRKED
Sbjct: 373 GKMVVSKPLYVALAQRKED 391



 Score = 99.4 bits (246), Expect(2) = 6e-79
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = +1

Query: 682 GPGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825
           GPGIGQQLFYGQ PPAMIPSQ GFGYQQQLVPG+RPG GPMPNFF+PM
Sbjct: 423 GPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPM 470



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 38/80 (47%), Positives = 51/80 (63%)
 Frame = +3

Query: 360 NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 539
           N++IKNLD  ID   L + FS FGSI SCKV  D SG S+G GFV F   E A +A+ ++
Sbjct: 118 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKL 177

Query: 540 NGKMIVSKPLYVALAQRKED 599
           NG ++  K +YV    RK++
Sbjct: 178 NGMLLNDKQVYVGPFLRKQE 197


>ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
           2-like [Cucumis sativus]
          Length = 576

 Score =  222 bits (566), Expect(2) = 6e-79
 Identities = 118/199 (59%), Positives = 135/199 (67%)
 Frame = +3

Query: 3   ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182
           ERD V+ K+KFNNV+VKN+SE+TTEEDL   F E+GT+TS+VVMRD              
Sbjct: 119 ERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFE 178

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362
                                               RE+ELK+RFEQT KE  DK+QG N
Sbjct: 179 NADDAARAVDTLNGKLVDDKEWYVGKAQKKSE----REVELKHRFEQTMKEAADKYQGAN 234

Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542
           LYIKNLDD+I DDKLKELF+ FG+I SCKVMRDP+GISRGSGFVAFSTP+EASRAL EMN
Sbjct: 235 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 294

Query: 543 GKMIVSKPLYVALAQRKED 599
           GKM+VSKPLYVALAQRKED
Sbjct: 295 GKMVVSKPLYVALAQRKED 313



 Score = 99.4 bits (246), Expect(2) = 6e-79
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = +1

Query: 682 GPGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825
           GPGIGQQLFYGQ PPAMIPSQ GFGYQQQLVPG+RPG GPMPNFF+PM
Sbjct: 345 GPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPM 392



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 38/80 (47%), Positives = 51/80 (63%)
 Frame = +3

Query: 360 NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 539
           N++IKNLD  ID   L + FS FGSI SCKV  D SG S+G GFV F   E A +A+ ++
Sbjct: 40  NIFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKL 99

Query: 540 NGKMIVSKPLYVALAQRKED 599
           NG ++  K +YV    RK++
Sbjct: 100 NGMLLNDKQVYVGPFLRKQE 119


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