BLASTX nr result
ID: Panax21_contig00001121
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00001121 (983 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota] 239 2e-82 ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [... 232 2e-80 emb|CBI19489.3| unnamed protein product [Vitis vinifera] 232 2e-80 ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-l... 222 6e-79 ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 222 6e-79 >gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota] Length = 658 Score = 239 bits (610), Expect(2) = 2e-82 Identities = 127/199 (63%), Positives = 144/199 (72%) Frame = +3 Query: 3 ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182 +RDS +SKTKFNN+YVKN+S+ST+E+DL+ TFGEYGTITSVVVMRD Sbjct: 208 DRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFE 267 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362 RE+ELK+RFEQT KEQVDK+QGVN Sbjct: 268 NPEDAAKAVDALNGKKFDDKEWYVGKAQKKSE----REVELKSRFEQTVKEQVDKYQGVN 323 Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542 LY+KNLDDTIDD+KLKELFS++G+I SCKVMRDPSGISRGSGFVAFSTPEEASRAL EMN Sbjct: 324 LYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMN 383 Query: 543 GKMIVSKPLYVALAQRKED 599 GKMIVSKPLYVALAQRKE+ Sbjct: 384 GKMIVSKPLYVALAQRKEE 402 Score = 94.4 bits (233), Expect(2) = 2e-82 Identities = 41/47 (87%), Positives = 43/47 (91%) Frame = +1 Query: 685 PGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825 PG+GQQLFYGQ PPAMI QAGFGYQQQLVPGMRPG GPMPNFF+PM Sbjct: 435 PGMGQQLFYGQAPPAMIAPQAGFGYQQQLVPGMRPGGGPMPNFFMPM 481 Score = 79.0 bits (193), Expect = 2e-12 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Frame = +3 Query: 312 RFEQTAKEQVDKFQGV-NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSG 488 R + ++ D+ G N++IKNLD +ID L E FS FG+I SCK+ D SG S+G G Sbjct: 112 RVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYG 171 Query: 489 FVAFSTPEEASRALAEMNGKMIVSKPLYVALAQRKED 599 FV + + E A A+ ++NG ++ K +YV + RK+D Sbjct: 172 FVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQD 208 Score = 77.4 bits (189), Expect = 5e-12 Identities = 37/94 (39%), Positives = 58/94 (61%) Frame = +3 Query: 318 EQTAKEQVDKFQGVNLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVA 497 +Q ++ K + N+Y+KNL D+ +D L++ F ++G+I S VMRD G S+ GFV Sbjct: 206 KQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVN 265 Query: 498 FSTPEEASRALAEMNGKMIVSKPLYVALAQRKED 599 F PE+A++A+ +NGK K YV AQ+K + Sbjct: 266 FENPEDAAKAVDALNGKKFDDKEWYVGKAQKKSE 299 >ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera] gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera] Length = 640 Score = 232 bits (591), Expect(2) = 2e-80 Identities = 127/199 (63%), Positives = 139/199 (69%) Frame = +3 Query: 3 ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182 ER++ ++KTKFNNVYVKN+SESTTEEDLKN FGE+G ITSVVVMRD Sbjct: 186 ERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFE 245 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362 RELELK RFEQ+ KE VDKFQGVN Sbjct: 246 NADDAAEAVEALNGKKFDEKEWYVGKAQKKYE----RELELKGRFEQSMKEVVDKFQGVN 301 Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542 LYIKNLDD+I DDKLKELFS+FG+I SCKVMRDPSGISRGSGFVAFST EEASRAL EMN Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361 Query: 543 GKMIVSKPLYVALAQRKED 599 GKM+VSKPLYVALAQRKE+ Sbjct: 362 GKMVVSKPLYVALAQRKEE 380 Score = 94.7 bits (234), Expect(2) = 2e-80 Identities = 40/47 (85%), Positives = 44/47 (93%) Frame = +1 Query: 685 PGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825 PG+GQQLFYGQGPPA+IP QAGFGYQQQLVPGMRPG PMPNFF+P+ Sbjct: 413 PGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPL 459 Score = 80.1 bits (196), Expect = 8e-13 Identities = 38/80 (47%), Positives = 53/80 (66%) Frame = +3 Query: 360 NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 539 N++IKNLD +ID+ L + FS FG+I SCK+ DPSG S+G GFV F E A A+ ++ Sbjct: 107 NIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKL 166 Query: 540 NGKMIVSKPLYVALAQRKED 599 NG +I K +YV RK++ Sbjct: 167 NGMLINDKQVYVGQFLRKQE 186 Score = 69.3 bits (168), Expect = 1e-09 Identities = 35/92 (38%), Positives = 55/92 (59%) Frame = +3 Query: 318 EQTAKEQVDKFQGVNLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVA 497 +Q + ++K + N+Y+KNL ++ ++ LK +F +FG I S VMRD G S+ GFV Sbjct: 184 KQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVN 243 Query: 498 FSTPEEASRALAEMNGKMIVSKPLYVALAQRK 593 F ++A+ A+ +NGK K YV AQ+K Sbjct: 244 FENADDAAEAVEALNGKKFDEKEWYVGKAQKK 275 >emb|CBI19489.3| unnamed protein product [Vitis vinifera] Length = 621 Score = 232 bits (591), Expect(2) = 2e-80 Identities = 127/199 (63%), Positives = 139/199 (69%) Frame = +3 Query: 3 ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182 ER++ ++KTKFNNVYVKN+SESTTEEDLKN FGE+G ITSVVVMRD Sbjct: 186 ERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFE 245 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362 RELELK RFEQ+ KE VDKFQGVN Sbjct: 246 NADDAAEAVEALNGKKFDEKEWYVGKAQKKYE----RELELKGRFEQSMKEVVDKFQGVN 301 Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542 LYIKNLDD+I DDKLKELFS+FG+I SCKVMRDPSGISRGSGFVAFST EEASRAL EMN Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361 Query: 543 GKMIVSKPLYVALAQRKED 599 GKM+VSKPLYVALAQRKE+ Sbjct: 362 GKMVVSKPLYVALAQRKEE 380 Score = 94.7 bits (234), Expect(2) = 2e-80 Identities = 40/47 (85%), Positives = 44/47 (93%) Frame = +1 Query: 685 PGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825 PG+GQQLFYGQGPPA+IP QAGFGYQQQLVPGMRPG PMPNFF+P+ Sbjct: 413 PGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPL 459 Score = 80.1 bits (196), Expect = 8e-13 Identities = 38/80 (47%), Positives = 53/80 (66%) Frame = +3 Query: 360 NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 539 N++IKNLD +ID+ L + FS FG+I SCK+ DPSG S+G GFV F E A A+ ++ Sbjct: 107 NIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKL 166 Query: 540 NGKMIVSKPLYVALAQRKED 599 NG +I K +YV RK++ Sbjct: 167 NGMLINDKQVYVGQFLRKQE 186 Score = 69.3 bits (168), Expect = 1e-09 Identities = 35/92 (38%), Positives = 55/92 (59%) Frame = +3 Query: 318 EQTAKEQVDKFQGVNLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVA 497 +Q + ++K + N+Y+KNL ++ ++ LK +F +FG I S VMRD G S+ GFV Sbjct: 184 KQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVN 243 Query: 498 FSTPEEASRALAEMNGKMIVSKPLYVALAQRK 593 F ++A+ A+ +NGK K YV AQ+K Sbjct: 244 FENADDAAEAVEALNGKKFDEKEWYVGKAQKK 275 >ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus] Length = 654 Score = 222 bits (566), Expect(2) = 6e-79 Identities = 118/199 (59%), Positives = 135/199 (67%) Frame = +3 Query: 3 ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182 ERD V+ K+KFNNV+VKN+SE+TTEEDL F E+GT+TS+VVMRD Sbjct: 197 ERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFE 256 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362 RE+ELK+RFEQT KE DK+QG N Sbjct: 257 NADDAARAVDTLNGKLVDDKEWYVGKAQKKSE----REVELKHRFEQTMKEAADKYQGAN 312 Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542 LYIKNLDD+I DDKLKELF+ FG+I SCKVMRDP+GISRGSGFVAFSTP+EASRAL EMN Sbjct: 313 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 372 Query: 543 GKMIVSKPLYVALAQRKED 599 GKM+VSKPLYVALAQRKED Sbjct: 373 GKMVVSKPLYVALAQRKED 391 Score = 99.4 bits (246), Expect(2) = 6e-79 Identities = 43/48 (89%), Positives = 45/48 (93%) Frame = +1 Query: 682 GPGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825 GPGIGQQLFYGQ PPAMIPSQ GFGYQQQLVPG+RPG GPMPNFF+PM Sbjct: 423 GPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPM 470 Score = 76.3 bits (186), Expect = 1e-11 Identities = 38/80 (47%), Positives = 51/80 (63%) Frame = +3 Query: 360 NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 539 N++IKNLD ID L + FS FGSI SCKV D SG S+G GFV F E A +A+ ++ Sbjct: 118 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKL 177 Query: 540 NGKMIVSKPLYVALAQRKED 599 NG ++ K +YV RK++ Sbjct: 178 NGMLLNDKQVYVGPFLRKQE 197 >ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 2-like [Cucumis sativus] Length = 576 Score = 222 bits (566), Expect(2) = 6e-79 Identities = 118/199 (59%), Positives = 135/199 (67%) Frame = +3 Query: 3 ERDSVISKTKFNNVYVKNISESTTEEDLKNTFGEYGTITSVVVMRDXXXXXXXXXXXXXX 182 ERD V+ K+KFNNV+VKN+SE+TTEEDL F E+GT+TS+VVMRD Sbjct: 119 ERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFE 178 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELELKNRFEQTAKEQVDKFQGVN 362 RE+ELK+RFEQT KE DK+QG N Sbjct: 179 NADDAARAVDTLNGKLVDDKEWYVGKAQKKSE----REVELKHRFEQTMKEAADKYQGAN 234 Query: 363 LYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 542 LYIKNLDD+I DDKLKELF+ FG+I SCKVMRDP+GISRGSGFVAFSTP+EASRAL EMN Sbjct: 235 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 294 Query: 543 GKMIVSKPLYVALAQRKED 599 GKM+VSKPLYVALAQRKED Sbjct: 295 GKMVVSKPLYVALAQRKED 313 Score = 99.4 bits (246), Expect(2) = 6e-79 Identities = 43/48 (89%), Positives = 45/48 (93%) Frame = +1 Query: 682 GPGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGSGPMPNFFLPM 825 GPGIGQQLFYGQ PPAMIPSQ GFGYQQQLVPG+RPG GPMPNFF+PM Sbjct: 345 GPGIGQQLFYGQAPPAMIPSQGGFGYQQQLVPGIRPGGGPMPNFFVPM 392 Score = 76.3 bits (186), Expect = 1e-11 Identities = 38/80 (47%), Positives = 51/80 (63%) Frame = +3 Query: 360 NLYIKNLDDTIDDDKLKELFSDFGSIASCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 539 N++IKNLD ID L + FS FGSI SCKV D SG S+G GFV F E A +A+ ++ Sbjct: 40 NIFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKL 99 Query: 540 NGKMIVSKPLYVALAQRKED 599 NG ++ K +YV RK++ Sbjct: 100 NGMLLNDKQVYVGPFLRKQE 119