BLASTX nr result

ID: Panax21_contig00001116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001116
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein M...   391   e-107
ref|XP_004135716.1| PREDICTED: WD-40 repeat-containing protein M...   391   e-107
ref|XP_002282044.2| PREDICTED: WD-40 repeat-containing protein M...   390   e-107
emb|CBI27909.3| unnamed protein product [Vitis vinifera]              390   e-107
ref|XP_002330494.1| nucleosome/chromatin assembly factor group [...   390   e-106

>ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
           sativus]
          Length = 518

 Score =  391 bits (1005), Expect = e-107
 Identities = 181/222 (81%), Positives = 200/222 (90%), Gaps = 5/222 (2%)
 Frame = -3

Query: 653 KASDNPSIGPRGIFQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSNPVIKVEK 474
           KASD PSIGPRG++ GHEDTVEDV FCPS+AQEFCSVGDDSCLILWDARTGS+P +KVEK
Sbjct: 283 KASDGPSIGPRGVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEK 342

Query: 473 AHSADVHCVDWNALDTNLILTGSADHSVCMFDRRNL-----GSPIHKFEDHKAAVLCVQW 309
           AH+AD+HCVDWN  D NLI+TGSAD+S+ +FDRRNL     GSPI+KFE HKAAVLCVQW
Sbjct: 343 AHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQW 402

Query: 308 CPDKSSVFGSSAEDGFLNIWDYEKVGKKKERGTRSPNCPPGLFFKHAGHRDKVVDFHWNA 129
            PDKSSVFGSSAEDG LNIWDY+KVGKK ER TR+P  PPGLFF+HAGHRDKVVDFHWNA
Sbjct: 403 SPDKSSVFGSSAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA 462

Query: 128 SDPWTIVSVSDDVETSNGGGTLQIWRMSDLIYRPEEEVLAEL 3
           +DPWT+VSVSDD +T+ GGGTLQIWRMSDLIYRPEEEVLAEL
Sbjct: 463 ADPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEEEVLAEL 504


>ref|XP_004135716.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
           sativus]
          Length = 512

 Score =  391 bits (1005), Expect = e-107
 Identities = 181/222 (81%), Positives = 200/222 (90%), Gaps = 5/222 (2%)
 Frame = -3

Query: 653 KASDNPSIGPRGIFQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSNPVIKVEK 474
           KASD PSIGPRG++ GHEDTVEDV FCPS+AQEFCSVGDDSCLILWDARTGS+P +KVEK
Sbjct: 277 KASDGPSIGPRGVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEK 336

Query: 473 AHSADVHCVDWNALDTNLILTGSADHSVCMFDRRNL-----GSPIHKFEDHKAAVLCVQW 309
           AH+AD+HCVDWN  D NLI+TGSAD+S+ +FDRRNL     GSPI+KFE HKAAVLCVQW
Sbjct: 337 AHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQW 396

Query: 308 CPDKSSVFGSSAEDGFLNIWDYEKVGKKKERGTRSPNCPPGLFFKHAGHRDKVVDFHWNA 129
            PDKSSVFGSSAEDG LNIWDY+KVGKK ER TR+P  PPGLFF+HAGHRDKVVDFHWNA
Sbjct: 397 SPDKSSVFGSSAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA 456

Query: 128 SDPWTIVSVSDDVETSNGGGTLQIWRMSDLIYRPEEEVLAEL 3
           +DPWT+VSVSDD +T+ GGGTLQIWRMSDLIYRPEEEVLAEL
Sbjct: 457 ADPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEEEVLAEL 498


>ref|XP_002282044.2| PREDICTED: WD-40 repeat-containing protein MSI4 [Vitis vinifera]
          Length = 508

 Score =  390 bits (1003), Expect = e-107
 Identities = 183/222 (82%), Positives = 197/222 (88%), Gaps = 5/222 (2%)
 Frame = -3

Query: 653 KASDNPSIGPRGIFQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSNPVIKVEK 474
           K +D+PSIGPRGIF GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDAR G +PV+KVEK
Sbjct: 273 KPADSPSIGPRGIFHGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARVGFSPVVKVEK 332

Query: 473 AHSADVHCVDWNALDTNLILTGSADHSVCMFDRRNL-----GSPIHKFEDHKAAVLCVQW 309
           AH+AD+HCVDWN  D NLILTGSAD+SVCMFDRRNL     GSPIHKFEDHKAAVLCVQW
Sbjct: 333 AHNADLHCVDWNPHDQNLILTGSADNSVCMFDRRNLTSGGVGSPIHKFEDHKAAVLCVQW 392

Query: 308 CPDKSSVFGSSAEDGFLNIWDYEKVGKKKERGTRSPNCPPGLFFKHAGHRDKVVDFHWNA 129
           CPDKSSVFGSSAEDG LNIWD++ VGKKKE G R+P    GLFFKHAGHRDKVVDFHWNA
Sbjct: 393 CPDKSSVFGSSAEDGLLNIWDHQLVGKKKEGGPRTPTSASGLFFKHAGHRDKVVDFHWNA 452

Query: 128 SDPWTIVSVSDDVETSNGGGTLQIWRMSDLIYRPEEEVLAEL 3
           SDPWT+VSVSDD + S GGGTLQIWRMSD+IYR E+ VLAEL
Sbjct: 453 SDPWTVVSVSDDCDVSGGGGTLQIWRMSDMIYRDEDAVLAEL 494


>emb|CBI27909.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  390 bits (1003), Expect = e-107
 Identities = 183/222 (82%), Positives = 197/222 (88%), Gaps = 5/222 (2%)
 Frame = -3

Query: 653 KASDNPSIGPRGIFQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSNPVIKVEK 474
           K +D+PSIGPRGIF GHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDAR G +PV+KVEK
Sbjct: 234 KPADSPSIGPRGIFHGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARVGFSPVVKVEK 293

Query: 473 AHSADVHCVDWNALDTNLILTGSADHSVCMFDRRNL-----GSPIHKFEDHKAAVLCVQW 309
           AH+AD+HCVDWN  D NLILTGSAD+SVCMFDRRNL     GSPIHKFEDHKAAVLCVQW
Sbjct: 294 AHNADLHCVDWNPHDQNLILTGSADNSVCMFDRRNLTSGGVGSPIHKFEDHKAAVLCVQW 353

Query: 308 CPDKSSVFGSSAEDGFLNIWDYEKVGKKKERGTRSPNCPPGLFFKHAGHRDKVVDFHWNA 129
           CPDKSSVFGSSAEDG LNIWD++ VGKKKE G R+P    GLFFKHAGHRDKVVDFHWNA
Sbjct: 354 CPDKSSVFGSSAEDGLLNIWDHQLVGKKKEGGPRTPTSASGLFFKHAGHRDKVVDFHWNA 413

Query: 128 SDPWTIVSVSDDVETSNGGGTLQIWRMSDLIYRPEEEVLAEL 3
           SDPWT+VSVSDD + S GGGTLQIWRMSD+IYR E+ VLAEL
Sbjct: 414 SDPWTVVSVSDDCDVSGGGGTLQIWRMSDMIYRDEDAVLAEL 455


>ref|XP_002330494.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
           gi|222872428|gb|EEF09559.1| nucleosome/chromatin
           assembly factor group [Populus trichocarpa]
          Length = 467

 Score =  390 bits (1001), Expect = e-106
 Identities = 181/222 (81%), Positives = 199/222 (89%), Gaps = 5/222 (2%)
 Frame = -3

Query: 653 KASDNPSIGPRGIFQGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSNPVIKVEK 474
           KA+D PS+GPRGI+QGHEDTVEDV FCPSSAQEFCSVGDDSCLILWDAR G++P IKVE+
Sbjct: 232 KATDGPSVGPRGIYQGHEDTVEDVAFCPSSAQEFCSVGDDSCLILWDARAGTSPAIKVER 291

Query: 473 AHSADVHCVDWNALDTNLILTGSADHSVCMFDRRNL-----GSPIHKFEDHKAAVLCVQW 309
           AH+AD+HCVDWN  D NLILTGSAD SVCMFDRRNL     G P++KFE HKAAVLCVQW
Sbjct: 292 AHNADLHCVDWNPQDDNLILTGSADTSVCMFDRRNLTSNGVGLPVYKFEGHKAAVLCVQW 351

Query: 308 CPDKSSVFGSSAEDGFLNIWDYEKVGKKKERGTRSPNCPPGLFFKHAGHRDKVVDFHWNA 129
            PDK+SVFGSSAEDG LNIWDYEKVGKK ER TR+P+ P GLFF+HAGHRDKVVDFHWNA
Sbjct: 352 SPDKASVFGSSAEDGLLNIWDYEKVGKKTERPTRAPSSPAGLFFQHAGHRDKVVDFHWNA 411

Query: 128 SDPWTIVSVSDDVETSNGGGTLQIWRMSDLIYRPEEEVLAEL 3
           SDPWT+VSVSDD +T+ GGGTLQIWRMSDLIYRPE+EVLAEL
Sbjct: 412 SDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLAEL 453


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