BLASTX nr result

ID: Panax21_contig00001097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001097
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-li...   412   e-113
emb|CBI34244.3| unnamed protein product [Vitis vinifera]              412   e-113
emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]   410   e-112
ref|XP_002533223.1| nucleolar protein nop56, putative [Ricinus c...   407   e-111
ref|XP_002512277.1| nucleolar protein nop56, putative [Ricinus c...   406   e-111

>ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-like [Vitis vinifera]
          Length = 573

 Score =  412 bits (1058), Expect = e-113
 Identities = 207/220 (94%), Positives = 217/220 (98%)
 Frame = -3

Query: 661 NSIKEKLKIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHSLSRYKLKFSP 482
           N+IKEKL+IECVHNN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHSLSRYKLKFSP
Sbjct: 94  NAIKEKLQIECVHNNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFSP 153

Query: 481 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKSVKLMGDRT 302
           DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAK+VKLMG+RT
Sbjct: 154 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKAVKLMGNRT 213

Query: 301 NAAKLDFSEILPEEIETELKEASLISMGTEVSDLDLINIKDLCDQVLSLSEYRAQLYDYL 122
           NAAKLDFSEILPEE+ETELKEA++ISMGTEVSDLDL+NIK+LCDQVLSLSEYRAQLYDYL
Sbjct: 214 NAAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKELCDQVLSLSEYRAQLYDYL 273

Query: 121 KSRMNTIAPNLTSLVGELVGARLIAHGGSLLNLAKQPGST 2
           KSRMNTIAPNLT+LVGELVGARLIAHGGSLLNLAKQPGST
Sbjct: 274 KSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGST 313



 Score =  110 bits (274), Expect = 7e-22
 Identities = 55/64 (85%), Positives = 63/64 (98%)
 Frame = -2

Query: 1019 ETPAGFALFKVLDEGKLSKVEDLSKEFSTADSARKIVKLKAFSKFENTSEALSAATMLIE 840
            ETPAGFALFKVLDEGKLSKVEDL KEFS+++SAR++VKLKAFSKFENT+EALSAAT+LI+
Sbjct: 6    ETPAGFALFKVLDEGKLSKVEDLWKEFSSSESARQVVKLKAFSKFENTTEALSAATLLID 65

Query: 839  SKPS 828
            SKPS
Sbjct: 66   SKPS 69


>emb|CBI34244.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  412 bits (1058), Expect = e-113
 Identities = 207/220 (94%), Positives = 217/220 (98%)
 Frame = -3

Query: 661 NSIKEKLKIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHSLSRYKLKFSP 482
           N+IKEKL+IECVHNN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHSLSRYKLKFSP
Sbjct: 94  NAIKEKLQIECVHNNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFSP 153

Query: 481 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKSVKLMGDRT 302
           DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAK+VKLMG+RT
Sbjct: 154 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKAVKLMGNRT 213

Query: 301 NAAKLDFSEILPEEIETELKEASLISMGTEVSDLDLINIKDLCDQVLSLSEYRAQLYDYL 122
           NAAKLDFSEILPEE+ETELKEA++ISMGTEVSDLDL+NIK+LCDQVLSLSEYRAQLYDYL
Sbjct: 214 NAAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKELCDQVLSLSEYRAQLYDYL 273

Query: 121 KSRMNTIAPNLTSLVGELVGARLIAHGGSLLNLAKQPGST 2
           KSRMNTIAPNLT+LVGELVGARLIAHGGSLLNLAKQPGST
Sbjct: 274 KSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGST 313



 Score =  110 bits (274), Expect = 7e-22
 Identities = 55/64 (85%), Positives = 63/64 (98%)
 Frame = -2

Query: 1019 ETPAGFALFKVLDEGKLSKVEDLSKEFSTADSARKIVKLKAFSKFENTSEALSAATMLIE 840
            ETPAGFALFKVLDEGKLSKVEDL KEFS+++SAR++VKLKAFSKFENT+EALSAAT+LI+
Sbjct: 6    ETPAGFALFKVLDEGKLSKVEDLWKEFSSSESARQVVKLKAFSKFENTTEALSAATLLID 65

Query: 839  SKPS 828
            SKPS
Sbjct: 66   SKPS 69


>emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]
          Length = 472

 Score =  410 bits (1055), Expect = e-112
 Identities = 206/220 (93%), Positives = 217/220 (98%)
 Frame = -3

Query: 661 NSIKEKLKIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHSLSRYKLKFSP 482
           N+IKEKL+IECVHNN VMELMRGVRSQLTELISGL  QDLAPMSLGLSHSLSRYKLKFSP
Sbjct: 94  NAIKEKLQIECVHNNAVMELMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFSP 153

Query: 481 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKSVKLMGDRT 302
           DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILY+K+VKLMG+RT
Sbjct: 154 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYSKAVKLMGNRT 213

Query: 301 NAAKLDFSEILPEEIETELKEASLISMGTEVSDLDLINIKDLCDQVLSLSEYRAQLYDYL 122
           NAAKLDFSEILPEE+ETELKEA++ISMGTEVSDLDL+NIK+LCDQVLSLSEYRAQLYDYL
Sbjct: 214 NAAKLDFSEILPEEVETELKEAAMISMGTEVSDLDLMNIKELCDQVLSLSEYRAQLYDYL 273

Query: 121 KSRMNTIAPNLTSLVGELVGARLIAHGGSLLNLAKQPGST 2
           KSRMNTIAPNLT+LVGELVGARLIAHGGSLLNLAKQPGST
Sbjct: 274 KSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGST 313



 Score =  111 bits (278), Expect = 2e-22
 Identities = 56/64 (87%), Positives = 63/64 (98%)
 Frame = -2

Query: 1019 ETPAGFALFKVLDEGKLSKVEDLSKEFSTADSARKIVKLKAFSKFENTSEALSAATMLIE 840
            ETPAGFALFKVLDEGKLSKVEDL KEFST++SAR++VKLKAFSKFENT+EALSAAT+LI+
Sbjct: 6    ETPAGFALFKVLDEGKLSKVEDLWKEFSTSESARQVVKLKAFSKFENTTEALSAATLLID 65

Query: 839  SKPS 828
            SKPS
Sbjct: 66   SKPS 69


>ref|XP_002533223.1| nucleolar protein nop56, putative [Ricinus communis]
           gi|223526966|gb|EEF29163.1| nucleolar protein nop56,
           putative [Ricinus communis]
          Length = 558

 Score =  407 bits (1046), Expect = e-111
 Identities = 203/220 (92%), Positives = 216/220 (98%)
 Frame = -3

Query: 661 NSIKEKLKIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHSLSRYKLKFSP 482
           N+IK+KLKI+CVHNN VMELMRG+RSQLT+LISGLGAQDLAPMSLGLSHSLSRYKLKFSP
Sbjct: 94  NAIKDKLKIDCVHNNAVMELMRGLRSQLTDLISGLGAQDLAPMSLGLSHSLSRYKLKFSP 153

Query: 481 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKSVKLMGDRT 302
           DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKSVKLMG R 
Sbjct: 154 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKSVKLMGSRD 213

Query: 301 NAAKLDFSEILPEEIETELKEASLISMGTEVSDLDLINIKDLCDQVLSLSEYRAQLYDYL 122
           NA KLDFSEILPEE+ETELKEA+LISMGTEV+D+DL+NI+DLCDQVLSL+EYRAQLYDYL
Sbjct: 214 NATKLDFSEILPEEVETELKEAALISMGTEVNDVDLMNIRDLCDQVLSLAEYRAQLYDYL 273

Query: 121 KSRMNTIAPNLTSLVGELVGARLIAHGGSLLNLAKQPGST 2
           KSRMNTIAPNLT+LVGELVGARLIAHGGSLLNLAKQPGST
Sbjct: 274 KSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGST 313



 Score =  109 bits (272), Expect = 1e-21
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = -2

Query: 1019 ETPAGFALFKVLDEGKLSKVEDLSKEFSTADSARKIVKLKAFSKFENTSEALSAATMLIE 840
            ETPAGFALFKVLDEGKLSKVEDLSKEF+ ADSARK+VKLKAFSKFENTS+AL AAT L++
Sbjct: 6    ETPAGFALFKVLDEGKLSKVEDLSKEFANADSARKVVKLKAFSKFENTSKALEAATKLLD 65

Query: 839  SKPS 828
            S PS
Sbjct: 66   SAPS 69


>ref|XP_002512277.1| nucleolar protein nop56, putative [Ricinus communis]
           gi|223548238|gb|EEF49729.1| nucleolar protein nop56,
           putative [Ricinus communis]
          Length = 575

 Score =  406 bits (1044), Expect = e-111
 Identities = 203/220 (92%), Positives = 215/220 (97%)
 Frame = -3

Query: 661 NSIKEKLKIECVHNNTVMELMRGVRSQLTELISGLGAQDLAPMSLGLSHSLSRYKLKFSP 482
           N+IKEKLKIECVH+N VMELMRGVRSQLTELISGLG QDLAPMSLGLSHSLSRYKLKFSP
Sbjct: 94  NAIKEKLKIECVHSNAVMELMRGVRSQLTELISGLGVQDLAPMSLGLSHSLSRYKLKFSP 153

Query: 481 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKSVKLMGDRT 302
           DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAK+VKLMG R 
Sbjct: 154 DKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIVQDNILYAKAVKLMGSRN 213

Query: 301 NAAKLDFSEILPEEIETELKEASLISMGTEVSDLDLINIKDLCDQVLSLSEYRAQLYDYL 122
           NA KLDFSE+LPEE+ETELKEA+LISMGTEVS++DLINI++LCDQVLSL+EYRAQLYDYL
Sbjct: 214 NAVKLDFSEVLPEEVETELKEAALISMGTEVSEVDLINIRELCDQVLSLAEYRAQLYDYL 273

Query: 121 KSRMNTIAPNLTSLVGELVGARLIAHGGSLLNLAKQPGST 2
           KSRMNTIAPNLT+LVGELVGARLIAHGGSLLNLAKQPGST
Sbjct: 274 KSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGST 313



 Score =  110 bits (275), Expect = 5e-22
 Identities = 57/64 (89%), Positives = 59/64 (92%)
 Frame = -2

Query: 1019 ETPAGFALFKVLDEGKLSKVEDLSKEFSTADSARKIVKLKAFSKFENTSEALSAATMLIE 840
            ETPAGFALFKVLDEGKLSKVEDLSKEFSTADSARK+VKLKAFSKFENTSEAL AAT +IE
Sbjct: 6    ETPAGFALFKVLDEGKLSKVEDLSKEFSTADSARKVVKLKAFSKFENTSEALEAATKIIE 65

Query: 839  SKPS 828
               S
Sbjct: 66   GTAS 69


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