BLASTX nr result

ID: Panax21_contig00001006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001006
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513843.1| eukaryotic translation initiation factor, pu...   187   3e-45
ref|XP_002285825.1| PREDICTED: eukaryotic translation initiation...   187   4e-45
ref|XP_004169059.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...   179   1e-42
ref|XP_004150695.1| PREDICTED: eukaryotic translation initiation...   179   1e-42
ref|XP_002305183.1| predicted protein [Populus trichocarpa] gi|2...   161   3e-37

>ref|XP_002513843.1| eukaryotic translation initiation factor, putative [Ricinus
           communis] gi|223546929|gb|EEF48426.1| eukaryotic
           translation initiation factor, putative [Ricinus
           communis]
          Length = 447

 Score =  187 bits (476), Expect = 3e-45
 Identities = 113/204 (55%), Positives = 132/204 (64%), Gaps = 2/204 (0%)
 Frame = +3

Query: 120 NLSDEDNSPAGS--QXXXXXXXXXXXXXXXVQWQTDTSAEAARQRIQEQLSNVTAGMVML 293
           N SDED+SP  S                  VQWQTDTS EAA+QRIQEQLS VTA MVML
Sbjct: 208 NGSDEDHSPTRSLPDENDQLTADDDEDDGDVQWQTDTSLEAAKQRIQEQLSTVTADMVML 267

Query: 294 STTEEKPKSGKNSPGREEEKLNVNGHSNGAVKSSTTLHDSLVLEIKGYLKNGSPASQLKS 473
           +T EEK KS K SP RE     V  H NG+  + +   + LV EIK +LK GS  SQLKS
Sbjct: 268 TTDEEKAKSAKKSPERE-----VKVHENGSKSNGS--QEGLVHEIKAHLKKGSSPSQLKS 320

Query: 474 FLATLSVTSQQVMDALFEALFDGAGKGFSKEVTKKKNYLAAASQEEGSQLVLLNAFEAFC 653
           +L++LS TSQ+VM+ALF ALF+G  KGFSKEVTK+K YLAAA+QEEGSQ+VLL+A E+F 
Sbjct: 321 YLSSLSGTSQEVMNALFAALFEGVEKGFSKEVTKRKKYLAAATQEEGSQIVLLHAIESFF 380

Query: 654 GKSSTXXXXXXXXXXXXXYDNDVL 725
            K S              YDNDVL
Sbjct: 381 AKLSPEATKEVSLVLKVLYDNDVL 404


>ref|XP_002285825.1| PREDICTED: eukaryotic translation initiation factor 5-like [Vitis
           vinifera]
          Length = 450

 Score =  187 bits (475), Expect = 4e-45
 Identities = 107/202 (52%), Positives = 129/202 (63%)
 Frame = +3

Query: 120 NLSDEDNSPAGSQXXXXXXXXXXXXXXXVQWQTDTSAEAARQRIQEQLSNVTAGMVMLST 299
           ++SDED SP GSQ               VQW+TD S EAA+QRI+EQLS VTAGMVMLS 
Sbjct: 209 SVSDEDRSPTGSQADENETEPADESDDDVQWKTDPSVEAAQQRIKEQLSAVTAGMVMLSM 268

Query: 300 TEEKPKSGKNSPGREEEKLNVNGHSNGAVKSSTTLHDSLVLEIKGYLKNGSPASQLKSFL 479
            EEK KS K SP + EEK  + G  NG    +    + LV EIK YLK G  A +LK+FL
Sbjct: 269 DEEKAKSTKKSP-KHEEKSELKGAQNGTKSGNN--QERLVDEIKEYLKKGPSAVKLKNFL 325

Query: 480 ATLSVTSQQVMDALFEALFDGAGKGFSKEVTKKKNYLAAASQEEGSQLVLLNAFEAFCGK 659
            +LS TSQ+++DALFEALF G GKG +KEV KKK YLAA +QE+ SQ +LL A E+FCGK
Sbjct: 326 GSLSGTSQEIIDALFEALFMGIGKGLAKEVAKKKTYLAAVTQEDRSQSILLRAIESFCGK 385

Query: 660 SSTXXXXXXXXXXXXXYDNDVL 725
           S+              YDND+L
Sbjct: 386 SNPEAVKEVGLVLKALYDNDLL 407


>ref|XP_004169059.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 5-like [Cucumis sativus]
          Length = 444

 Score =  179 bits (453), Expect = 1e-42
 Identities = 102/202 (50%), Positives = 125/202 (61%)
 Frame = +3

Query: 120 NLSDEDNSPAGSQXXXXXXXXXXXXXXXVQWQTDTSAEAARQRIQEQLSNVTAGMVMLST 299
           N SDED+SP  S                VQWQTDTS EAA+QRIQEQLS VTA MVMLST
Sbjct: 206 NGSDEDHSPTRSHADDNDRAADDEDDDDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLST 265

Query: 300 TEEKPKSGKNSPGREEEKLNVNGHSNGAVKSSTTLHDSLVLEIKGYLKNGSPASQLKSFL 479
           TEE   S K+S   E EK   NG+ NG   +  + H +L+ EIK YLK G+  + LKSFL
Sbjct: 266 TEENKSSKKSS---EHEKSAANGNKNG---NGVSTHGALIQEIKDYLKKGASTTDLKSFL 319

Query: 480 ATLSVTSQQVMDALFEALFDGAGKGFSKEVTKKKNYLAAASQEEGSQLVLLNAFEAFCGK 659
            +L+ T Q++++AL EALFDG GKGFSKEV KKK +LA  +  EGSQ++LL A E+FC  
Sbjct: 320 ESLAGTRQEIVNALVEALFDGVGKGFSKEVVKKKKFLAVVAAVEGSQIILLRAIESFCLN 379

Query: 660 SSTXXXXXXXXXXXXXYDNDVL 725
           +S              YD DV+
Sbjct: 380 TSPEAGKEVALVLKSLYDGDVI 401


>ref|XP_004150695.1| PREDICTED: eukaryotic translation initiation factor 5-like [Cucumis
           sativus]
          Length = 444

 Score =  179 bits (453), Expect = 1e-42
 Identities = 102/202 (50%), Positives = 125/202 (61%)
 Frame = +3

Query: 120 NLSDEDNSPAGSQXXXXXXXXXXXXXXXVQWQTDTSAEAARQRIQEQLSNVTAGMVMLST 299
           N SDED+SP  S                VQWQTDTS EAA+QRIQEQLS VTA MVMLST
Sbjct: 206 NGSDEDHSPTRSHADDNDRAADDEDDDDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLST 265

Query: 300 TEEKPKSGKNSPGREEEKLNVNGHSNGAVKSSTTLHDSLVLEIKGYLKNGSPASQLKSFL 479
           TEE   S K+S   E EK   NG+ NG   +  + H +L+ EIK YLK G+  + LKSFL
Sbjct: 266 TEENKSSKKSS---EHEKSAANGNKNG---NGVSTHGALIQEIKDYLKKGASTTDLKSFL 319

Query: 480 ATLSVTSQQVMDALFEALFDGAGKGFSKEVTKKKNYLAAASQEEGSQLVLLNAFEAFCGK 659
            +L+ T Q++++AL EALFDG GKGFSKEV KKK +LA  +  EGSQ++LL A E+FC  
Sbjct: 320 ESLAGTRQEIVNALVEALFDGVGKGFSKEVVKKKKFLAVVAAVEGSQIILLRAIESFCLN 379

Query: 660 SSTXXXXXXXXXXXXXYDNDVL 725
           +S              YD DV+
Sbjct: 380 TSPEAGKEVALVLKSLYDGDVI 401


>ref|XP_002305183.1| predicted protein [Populus trichocarpa] gi|222848147|gb|EEE85694.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  161 bits (407), Expect = 3e-37
 Identities = 110/215 (51%), Positives = 128/215 (59%), Gaps = 12/215 (5%)
 Frame = +3

Query: 117 ANLSDEDN-SPAGSQXXXXXXXXXXXXXXXVQWQTDTSAEAARQRIQEQLSNVTAGMVML 293
           AN SDE+  SP  SQ               VQWQTDTS EAARQRIQEQLS  TA MVML
Sbjct: 205 ANSSDEERMSPTHSQVDEKEEVVDDDDD--VQWQTDTSLEAARQRIQEQLSAATADMVML 262

Query: 294 STTEEKPK----SGKN------SPGREEEKLNVNGHSNGAVKSSTTLHDSLVLEIKGYLK 443
           ST E + K    S +N      SP REE+    NG        S + H +LV E+K  L+
Sbjct: 263 STEETEKKARALSKENGSPKVASPAREEKPKAENG--------SPSTHGTLVNELKLSLR 314

Query: 444 NGSPASQLKSFLATLSVTSQQVMDALFEALFDGAGKGFSKEVTKKKNYLAAA-SQEEGSQ 620
            G  ASQLKS L+ L+ ++Q+ MDALFEALF+G  KGF KEV KKKNYLAAA +Q+EGSQ
Sbjct: 315 KGVSASQLKSTLSALTGSAQEKMDALFEALFEGVAKGFVKEVAKKKNYLAAAVTQDEGSQ 374

Query: 621 LVLLNAFEAFCGKSSTXXXXXXXXXXXXXYDNDVL 725
           L+LL A  AFCGKS +             YD DVL
Sbjct: 375 LLLLRAIGAFCGKSGSSAMKEVALILKTLYDADVL 409


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