BLASTX nr result

ID: Panax21_contig00000499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000499
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|2...   467   0.0  
ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|2...   468   0.0  
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s...   461   0.0  
ref|XP_002523427.1| centromere/microtubule binding protein cbf5,...   457   0.0  
ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu...   455   0.0  

>ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|222854887|gb|EEE92434.1|
            predicted protein [Populus trichocarpa]
          Length = 593

 Score =  467 bits (1201), Expect(2) = 0.0
 Identities = 228/249 (91%), Positives = 241/249 (96%), Gaps = 1/249 (0%)
 Frame = +1

Query: 502  AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRR 681
            AVKRQLRIRTIYESKLLEYDAD+HLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRR
Sbjct: 188  AVKRQLRIRTIYESKLLEYDADRHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRR 247

Query: 682  VRSGIMGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVLLTSYKRLVVKDSAVNA 861
            VRSGI+GEKDNMVTMHDVMDAQWVYDN++DESYLRR IMPLEVLLTSYKRLVVKDSAVNA
Sbjct: 248  VRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRAIMPLEVLLTSYKRLVVKDSAVNA 307

Query: 862  ICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR 1041
            ICYGAKLMIPGLLRFENDIE GEEVVLMTTKGEA+ALGIAEMTTAVMATCDHGVVAKIKR
Sbjct: 308  ICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVVAKIKR 367

Query: 1042 VVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKNGKPNENTPAEWMRNVALPPGGDSMIAS 1221
            VVMDRDTYPRKWGLGP+AS+KKKL++EGKLDK+GKPNENTP EWMRN+ LPPGGDSM+A 
Sbjct: 368  VVMDRDTYPRKWGLGPRASIKKKLISEGKLDKHGKPNENTPHEWMRNLVLPPGGDSMVAG 427

Query: 1222 L-AAVTEPV 1245
            + AA  EPV
Sbjct: 428  IAAAAAEPV 436



 Score =  258 bits (658), Expect(2) = 0.0
 Identities = 121/131 (92%), Positives = 127/131 (96%)
 Frame = +3

Query: 39  NPTQNNSDDYLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEY 218
           NPT +   D++IKPQ+FTP+IDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEY
Sbjct: 26  NPTTDTDKDFMIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEY 85

Query: 219 IRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ 398
           IRYG+MNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ
Sbjct: 86  IRYGIMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ 145

Query: 399 QGAGKEYVCIA 431
           QGAGKEYVCIA
Sbjct: 146 QGAGKEYVCIA 156


>ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|222867894|gb|EEF05025.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  468 bits (1203), Expect(2) = 0.0
 Identities = 228/248 (91%), Positives = 239/248 (96%)
 Frame = +1

Query: 502  AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRR 681
            AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVG HMQELRR
Sbjct: 176  AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGGHMQELRR 235

Query: 682  VRSGIMGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVLLTSYKRLVVKDSAVNA 861
            VRSGI+GEKDNMVTMHDVMDAQWVYDN++DESYLRRVIMPLEV+LTSYKRLVVKDSAVNA
Sbjct: 236  VRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVILTSYKRLVVKDSAVNA 295

Query: 862  ICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR 1041
            ICYGAKLMIPGLLRFENDIE GEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR
Sbjct: 296  ICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR 355

Query: 1042 VVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKNGKPNENTPAEWMRNVALPPGGDSMIAS 1221
            VVMDRDTYPRKWGLGPKAS+KKKL++EGKLDK+GKPN+NTP EW RN+ LP GGDSM+A 
Sbjct: 356  VVMDRDTYPRKWGLGPKASIKKKLISEGKLDKHGKPNDNTPHEWARNLVLPAGGDSMVAG 415

Query: 1222 LAAVTEPV 1245
            LAA  EPV
Sbjct: 416  LAAAAEPV 423



 Score =  251 bits (641), Expect(2) = 0.0
 Identities = 121/131 (92%), Positives = 126/131 (96%)
 Frame = +3

Query: 39  NPTQNNSDDYLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEY 218
           NPT +   D++IKPQ+FTP+IDTSQWPILLKNYDRLNVRTGHYTPLP GHSPLKRPLAEY
Sbjct: 15  NPT-DTVKDFMIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPCGHSPLKRPLAEY 73

Query: 219 IRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ 398
           IRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ
Sbjct: 74  IRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ 133

Query: 399 QGAGKEYVCIA 431
           QGAGKEYVCIA
Sbjct: 134 QGAGKEYVCIA 144


>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis vinifera]
          Length = 586

 Score =  461 bits (1185), Expect(2) = 0.0
 Identities = 223/247 (90%), Positives = 239/247 (96%)
 Frame = +1

Query: 502  AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRR 681
            AVKRQLRIRTIYESKLLEYD D+HLVVFWISCEAGTYVRT+CVHLGLILGVG HMQELRR
Sbjct: 192  AVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRR 251

Query: 682  VRSGIMGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVLLTSYKRLVVKDSAVNA 861
            VRSGI+GEKDNMVTMHDVMDAQWVYDN++DESYLRRVIMPLEV+LTSYKRLVVKDSAVNA
Sbjct: 252  VRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVVLTSYKRLVVKDSAVNA 311

Query: 862  ICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR 1041
            ICYGAKLMIPGLLRFEN+IE GEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVA+IKR
Sbjct: 312  ICYGAKLMIPGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKR 371

Query: 1042 VVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKNGKPNENTPAEWMRNVALPPGGDSMIAS 1221
            VVMDRDTYPRKWGLGP+A+MKKKL+ EGKL+K+GKPNENTP+EW+RNV LP GGDSM+AS
Sbjct: 372  VVMDRDTYPRKWGLGPRAAMKKKLITEGKLNKHGKPNENTPSEWLRNVVLPTGGDSMVAS 431

Query: 1222 LAAVTEP 1242
            LAA  EP
Sbjct: 432  LAAAVEP 438



 Score =  251 bits (640), Expect(2) = 0.0
 Identities = 119/131 (90%), Positives = 128/131 (97%)
 Frame = +3

Query: 39  NPTQNNSDDYLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEY 218
           +PTQ + + +LIKPQSFTPS+DTSQWPILLKNYDRLNVRTGHYTPLPSG+SPLKRPLAEY
Sbjct: 31  DPTQKDGE-FLIKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEY 89

Query: 219 IRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ 398
           IRYG++NLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ
Sbjct: 90  IRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ 149

Query: 399 QGAGKEYVCIA 431
           QGAGKEYVC+A
Sbjct: 150 QGAGKEYVCVA 160


>ref|XP_002523427.1| centromere/microtubule binding protein cbf5, putative [Ricinus
            communis] gi|223537377|gb|EEF39006.1|
            centromere/microtubule binding protein cbf5, putative
            [Ricinus communis]
          Length = 581

 Score =  457 bits (1177), Expect(2) = 0.0
 Identities = 225/244 (92%), Positives = 237/244 (97%), Gaps = 1/244 (0%)
 Frame = +1

Query: 502  AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRR 681
            AVKRQLRIRTIYESKLLEYD D+HLVVFWISCEAGTYVRTMCVHLGLILGVG HMQELRR
Sbjct: 169  AVKRQLRIRTIYESKLLEYDPDRHLVVFWISCEAGTYVRTMCVHLGLILGVGGHMQELRR 228

Query: 682  VRSGIMGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVLLTSYKRLVVKDSAVNA 861
            VRSGI+GEKDNMVTMHDVMDAQWV+DN++DE+YLRRVIMPLEVLLTSYKRLVVKDSAVNA
Sbjct: 229  VRSGILGEKDNMVTMHDVMDAQWVFDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNA 288

Query: 862  ICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR 1041
            ICYGAKLMIPGLLRFEND+E GEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR
Sbjct: 289  ICYGAKLMIPGLLRFENDVEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR 348

Query: 1042 VVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKNGKPNENTPAEWMRN-VALPPGGDSMIA 1218
            VVMDRDTYPRKWGLGPKASMKKKL+AEGKLDK+GKPNENTP EWMRN VALP GGD+++A
Sbjct: 349  VVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKPNENTPQEWMRNLVALPTGGDAIVA 408

Query: 1219 SLAA 1230
            S AA
Sbjct: 409  STAA 412



 Score =  247 bits (630), Expect(2) = 0.0
 Identities = 119/131 (90%), Positives = 121/131 (92%)
 Frame = +3

Query: 39  NPTQNNSDDYLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEY 218
           N T    D  +IKPQSFTP  DTS WPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEY
Sbjct: 7   NGTDQEQDLTMIKPQSFTPPNDTSNWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEY 66

Query: 219 IRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ 398
           IRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ
Sbjct: 67  IRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQ 126

Query: 399 QGAGKEYVCIA 431
           QGAGKEYVC+A
Sbjct: 127 QGAGKEYVCVA 137


>ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
            subunit 4-like [Cucumis sativus]
          Length = 566

 Score =  455 bits (1170), Expect(2) = 0.0
 Identities = 222/240 (92%), Positives = 231/240 (96%)
 Frame = +1

Query: 502  AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRR 681
            AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRT+CVHLGLILGVG HMQELRR
Sbjct: 177  AVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRR 236

Query: 682  VRSGIMGEKDNMVTMHDVMDAQWVYDNFKDESYLRRVIMPLEVLLTSYKRLVVKDSAVNA 861
            VRSGI+GEKDNMVTMHDVMDAQW YDNFKDESYLRRVIMPLEV+LTSYKRLVVKDSAVNA
Sbjct: 237  VRSGILGEKDNMVTMHDVMDAQWFYDNFKDESYLRRVIMPLEVVLTSYKRLVVKDSAVNA 296

Query: 862  ICYGAKLMIPGLLRFENDIEVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR 1041
            ICYGAKLMIPGLLRFENDI  GEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR
Sbjct: 297  ICYGAKLMIPGLLRFENDIGAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKR 356

Query: 1042 VVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKNGKPNENTPAEWMRNVALPPGGDSMIAS 1221
            VVMDRDTYPRKWGLGP+ASMKKKL+ EGKLDK+GKPNENTP EWMRN+ LP GGD ++AS
Sbjct: 357  VVMDRDTYPRKWGLGPRASMKKKLIGEGKLDKHGKPNENTPQEWMRNLVLPTGGDVLVAS 416



 Score =  244 bits (622), Expect(2) = 0.0
 Identities = 113/123 (91%), Positives = 121/123 (98%)
 Frame = +3

Query: 63  DYLIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYIRYGVMNL 242
           D++IKPQSFTP +DTSQWPILLKNYDRLNVRTGHYTPLPSG+ PLKRPLAEYIRYG++NL
Sbjct: 23  DFMIKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNL 82

Query: 243 DKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV 422
           DKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV
Sbjct: 83  DKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV 142

Query: 423 CIA 431
           C+A
Sbjct: 143 CVA 145


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