BLASTX nr result

ID: Panax21_contig00000491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000491
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glyci...   187   6e-45
ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820...   187   6e-45
ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...   182   1e-43
emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]   181   3e-43
ref|XP_003600720.1| THO complex subunit [Medicago truncatula] gi...   180   7e-43

>ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
          Length = 298

 Score =  187 bits (475), Expect = 6e-45
 Identities = 89/121 (73%), Positives = 104/121 (85%)
 Frame = +2

Query: 839  SVCLHQSIRRTKSLPWQRDLLEESLRAVGLPGIENGAKLFVSNLDGGVSNEDIRELFSEI 1018
            S  + +SIRR +  PWQ DL E+SLRA G+ G+E G KL+VSNLD GV+NEDIRELFSE+
Sbjct: 79   SYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSEL 138

Query: 1019 GELKRYAIHYDKNGQPSGSAEVVFARRSDAFQAMKRYNNVQLDGKPMKIEIVGANSEIPI 1198
            GELKR+A+HYDKNG PSGSAEVV+ RRSDAF A+KRYNNV LDGKPMKIEIVG+NSE+PI
Sbjct: 139  GELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPI 198

Query: 1199 S 1201
            S
Sbjct: 199  S 199


>ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820344 [Glycine max]
          Length = 298

 Score =  187 bits (475), Expect = 6e-45
 Identities = 89/121 (73%), Positives = 104/121 (85%)
 Frame = +2

Query: 839  SVCLHQSIRRTKSLPWQRDLLEESLRAVGLPGIENGAKLFVSNLDGGVSNEDIRELFSEI 1018
            S  + +SIRR +  PWQ DL E+SLRA G+ G+E G KL+VSNLD GV+NEDIRELFSE+
Sbjct: 80   SYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSEL 139

Query: 1019 GELKRYAIHYDKNGQPSGSAEVVFARRSDAFQAMKRYNNVQLDGKPMKIEIVGANSEIPI 1198
            GELKR+A+HYDKNG PSGSAEVV+ RRSDAF A+KRYNNV LDGKPMKIEIVG+NSE+PI
Sbjct: 140  GELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPI 199

Query: 1199 S 1201
            S
Sbjct: 200  S 200


>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
            gi|296087136|emb|CBI33510.3| unnamed protein product
            [Vitis vinifera]
          Length = 269

 Score =  182 bits (463), Expect = 1e-43
 Identities = 89/142 (62%), Positives = 110/142 (77%)
 Frame = +2

Query: 839  SVCLHQSIRRTKSLPWQRDLLEESLRAVGLPGIENGAKLFVSNLDGGVSNEDIRELFSEI 1018
            S  + +S RRTK +PWQ DL E+SLRA GLPG+E G KL++SNLD GV+NEDIRELFSEI
Sbjct: 61   SYAIAKSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEI 119

Query: 1019 GELKRYAIHYDKNGQPSGSAEVVFARRSDAFQAMKRYNNVQLDGKPMKIEIVGANSEIPI 1198
            G++KRYA+HY+KNG+PSGSAEVV+ RRSDAF A+KRYNNV LDGKPMKIEI+G++S++P+
Sbjct: 120  GDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDMPV 179

Query: 1199 SVSAXXXXXXXXXXXXXXXMTP 1264
            S                  MTP
Sbjct: 180  SARVNVIGGVNGKRRRTVVMTP 201


>emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]
          Length = 348

 Score =  181 bits (460), Expect = 3e-43
 Identities = 88/137 (64%), Positives = 108/137 (78%)
 Frame = +2

Query: 854  QSIRRTKSLPWQRDLLEESLRAVGLPGIENGAKLFVSNLDGGVSNEDIRELFSEIGELKR 1033
            +S RRTK +PWQ DL E+SLRA GLPG+E G KL++SNLD GV+NEDIRELFSEIG++KR
Sbjct: 95   RSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEIGDIKR 153

Query: 1034 YAIHYDKNGQPSGSAEVVFARRSDAFQAMKRYNNVQLDGKPMKIEIVGANSEIPISVSAX 1213
            YA+HY+KNG+PSGSAEVV+ RRSDAF A+KRYNNV LDGKPMKIEI+G++S++P+S    
Sbjct: 154  YAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDMPVSARVN 213

Query: 1214 XXXXXXXXXXXXXXMTP 1264
                          MTP
Sbjct: 214  VIGGVNGKRRRTVVMTP 230


>ref|XP_003600720.1| THO complex subunit [Medicago truncatula] gi|355489768|gb|AES70971.1|
            THO complex subunit [Medicago truncatula]
          Length = 218

 Score =  180 bits (457), Expect = 7e-43
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = +2

Query: 851  HQSIRRTKSLPWQRDLLEESLRAVGLPGIENGAKLFVSNLDGGVSNEDIRELFSEIGELK 1030
            H SIRR K+L WQ DL E+SLRA G+ G+E   KL+VSNLD GV+NEDIRELFSE+GELK
Sbjct: 4    HFSIRRPKTLAWQSDLFEDSLRAAGIQGVEADTKLYVSNLDRGVTNEDIRELFSELGELK 63

Query: 1031 RYAIHYDKNGQPSGSAEVVFARRSDAFQAMKRYNNVQLDGKPMKIEIVGANSEIPIS 1201
            RYA+HYDKNG P+GSAEVV+ RRSDAF A+KRYNNV LDGKPMKIEIVG NS +P++
Sbjct: 64   RYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEIVGTNSALPVT 120


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