BLASTX nr result
ID: Panax21_contig00000472
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000472 (381 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 118 4e-25 emb|CBI39117.3| unnamed protein product [Vitis vinifera] 118 4e-25 ref|XP_002322768.1| predicted protein [Populus trichocarpa] gi|2... 104 7e-21 ref|XP_004167871.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 99 3e-19 ref|XP_004136533.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 99 3e-19 >ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Vitis vinifera] Length = 387 Score = 118 bits (296), Expect = 4e-25 Identities = 70/131 (53%), Positives = 81/131 (61%), Gaps = 7/131 (5%) Frame = -3 Query: 373 SRIFH-------QLQHLPVDASDTGLEDHIIQHLXXXXXXAMGRAQHVARRDGSRIRSST 215 S IFH +LQHLPV +D LE+ IIQHL MGRA H+ARR+G R RSS Sbjct: 106 SAIFHHPTLGDFELQHLPVGTNDPELEERIIQHLAAAAA--MGRAHHIARREGQRSRSSA 163 Query: 214 HARRQFLVFSTHPNSLXXXXXXXXXXXVQGEPEPASITVASPSVPLTASGGDLPQHNPQF 35 H R FLVFSTHPN+ V GE EPA+ITVASPS+PL A G + Q PQF Sbjct: 164 HGRSHFLVFSTHPNATASGPVPASLVQV-GENEPAAITVASPSIPLPAGGDEPSQEIPQF 222 Query: 34 PSVQSGQISAS 2 PSVQ+ +SAS Sbjct: 223 PSVQTDHMSAS 233 >emb|CBI39117.3| unnamed protein product [Vitis vinifera] Length = 391 Score = 118 bits (296), Expect = 4e-25 Identities = 70/131 (53%), Positives = 81/131 (61%), Gaps = 7/131 (5%) Frame = -3 Query: 373 SRIFH-------QLQHLPVDASDTGLEDHIIQHLXXXXXXAMGRAQHVARRDGSRIRSST 215 S IFH +LQHLPV +D LE+ IIQHL MGRA H+ARR+G R RSS Sbjct: 106 SAIFHHPTLGDFELQHLPVGTNDPELEERIIQHLAAAAA--MGRAHHIARREGQRSRSSA 163 Query: 214 HARRQFLVFSTHPNSLXXXXXXXXXXXVQGEPEPASITVASPSVPLTASGGDLPQHNPQF 35 H R FLVFSTHPN+ V GE EPA+ITVASPS+PL A G + Q PQF Sbjct: 164 HGRSHFLVFSTHPNATASGPVPASLVQV-GENEPAAITVASPSIPLPAGGDEPSQEIPQF 222 Query: 34 PSVQSGQISAS 2 PSVQ+ +SAS Sbjct: 223 PSVQTDHMSAS 233 >ref|XP_002322768.1| predicted protein [Populus trichocarpa] gi|222867398|gb|EEF04529.1| predicted protein [Populus trichocarpa] Length = 387 Score = 104 bits (260), Expect = 7e-21 Identities = 61/133 (45%), Positives = 78/133 (58%), Gaps = 7/133 (5%) Frame = -3 Query: 379 RNSRIFH-------QLQHLPVDASDTGLEDHIIQHLXXXXXXAMGRAQHVARRDGSRIRS 221 RN+ IFH +LQHLPV SD+ LE+ IIQHL MGR +H RR+G R R+ Sbjct: 100 RNATIFHHPTLGDFELQHLPVGVSDSELEERIIQHLAAAAA--MGRTRHFGRREGQRNRT 157 Query: 220 STHARRQFLVFSTHPNSLXXXXXXXXXXXVQGEPEPASITVASPSVPLTASGGDLPQHNP 41 S+H R FLVFSTHP + + GE EPA ++VASPS LT+ G + PQ Sbjct: 158 SSHGRPHFLVFSTHPGAQPSGHVSSSLTQLGGENEPAPVSVASPSTQLTSVGDEPPQQAL 217 Query: 40 QFPSVQSGQISAS 2 Q PSV + Q S++ Sbjct: 218 QSPSVLTDQSSSA 230 >ref|XP_004167871.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Cucumis sativus] Length = 371 Score = 99.4 bits (246), Expect = 3e-19 Identities = 60/133 (45%), Positives = 74/133 (55%), Gaps = 7/133 (5%) Frame = -3 Query: 379 RNSRIFH-------QLQHLPVDASDTGLEDHIIQHLXXXXXXAMGRAQHVARRDGSRIRS 221 RN+ +FH +LQHLP+ ++ LE+ IIQHL MGR H+ RR+G R RS Sbjct: 100 RNTAVFHHPALGNFELQHLPLGVNNAELEERIIQHLAAAAA--MGRTHHIGRREG-RSRS 156 Query: 220 STHARRQFLVFSTHPNSLXXXXXXXXXXXVQGEPEPASITVASPSVPLTASGGDLPQHNP 41 S+H R FLVFSTHP EPA ITVASPS PLT G + QH Sbjct: 157 SSHGRPHFLVFSTHPGGPPEHVSASGV-----HTEPAGITVASPSSPLTPRGDEPSQHIA 211 Query: 40 QFPSVQSGQISAS 2 QFPS+Q+ +S S Sbjct: 212 QFPSIQTDHVSRS 224 >ref|XP_004136533.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Cucumis sativus] Length = 371 Score = 99.4 bits (246), Expect = 3e-19 Identities = 60/133 (45%), Positives = 74/133 (55%), Gaps = 7/133 (5%) Frame = -3 Query: 379 RNSRIFH-------QLQHLPVDASDTGLEDHIIQHLXXXXXXAMGRAQHVARRDGSRIRS 221 RN+ +FH +LQHLP+ ++ LE+ IIQHL MGR H+ RR+G R RS Sbjct: 100 RNTAVFHHPALGNFELQHLPLGVNNAELEERIIQHLAAAAA--MGRTHHIGRREG-RSRS 156 Query: 220 STHARRQFLVFSTHPNSLXXXXXXXXXXXVQGEPEPASITVASPSVPLTASGGDLPQHNP 41 S+H R FLVFSTHP EPA ITVASPS PLT G + QH Sbjct: 157 SSHGRPHFLVFSTHPGGPPEHVSASGV-----HTEPAGITVASPSSPLTPRGDEPSQHIA 211 Query: 40 QFPSVQSGQISAS 2 QFPS+Q+ +S S Sbjct: 212 QFPSIQTDHVSRS 224