BLASTX nr result

ID: Panax21_contig00000471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000471
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285307.1| PREDICTED: GTP-binding nuclear protein Ran-3...   178   5e-43
emb|CBI36254.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|NP_200330.1| GTP-binding nuclear protein Ran-3 [Arabidopsis ...   177   1e-42
gb|AFD93409.1| Ras-like GTP-binding protein 3A, partial [Dimocar...   177   1e-42
gb|AFD93408.1| Ras-like GTP-binding protein 2, partial [Dimocarp...   177   1e-42

>ref|XP_002285307.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera]
          Length = 221

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/91 (95%), Positives = 89/91 (97%)
 Frame = +2

Query: 20  RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 199
           RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA
Sbjct: 113 RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 172

Query: 200 GDANLHFVESPALAPPEVQIDMVAQQQNK*E 292
           GDANLHFVESPALAPPEVQIDM AQQQ++ E
Sbjct: 173 GDANLHFVESPALAPPEVQIDMAAQQQHEAE 203


>emb|CBI36254.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/91 (95%), Positives = 89/91 (97%)
 Frame = +2

Query: 20  RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 199
           RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA
Sbjct: 159 RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 218

Query: 200 GDANLHFVESPALAPPEVQIDMVAQQQNK*E 292
           GDANLHFVESPALAPPEVQIDM AQQQ++ E
Sbjct: 219 GDANLHFVESPALAPPEVQIDMAAQQQHEAE 249


>ref|NP_200330.1| GTP-binding nuclear protein Ran-3 [Arabidopsis thaliana]
           gi|76789666|sp|Q8H156.2|RAN3_ARATH RecName:
           Full=GTP-binding nuclear protein Ran-3; AltName:
           Full=Ras-related nuclear protein 3
           gi|2149051|gb|AAB58478.1| small Ras-like GTP-binding
           protein [Arabidopsis thaliana]
           gi|9758116|dbj|BAB08588.1| small Ras-like GTP-binding
           protein [Arabidopsis thaliana]
           gi|14596017|gb|AAK68736.1| small Ras-like GTP-binding
           protein [Arabidopsis thaliana]
           gi|15215578|gb|AAK91334.1| AT5g55190/MCO15_14
           [Arabidopsis thaliana] gi|21435991|gb|AAM51573.1|
           AT5g55190/MCO15_14 [Arabidopsis thaliana]
           gi|332009215|gb|AED96598.1| GTP-binding nuclear protein
           Ran-3 [Arabidopsis thaliana]
          Length = 221

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/91 (94%), Positives = 89/91 (97%)
 Frame = +2

Query: 20  RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 199
           RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA
Sbjct: 113 RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 172

Query: 200 GDANLHFVESPALAPPEVQIDMVAQQQNK*E 292
           GDANLHFVESPALAPPEVQID+ AQQQ++ E
Sbjct: 173 GDANLHFVESPALAPPEVQIDLAAQQQHEAE 203


>gb|AFD93409.1| Ras-like GTP-binding protein 3A, partial [Dimocarpus longan]
          Length = 220

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/91 (94%), Positives = 89/91 (97%)
 Frame = +2

Query: 20  RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 199
           RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA
Sbjct: 112 RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 171

Query: 200 GDANLHFVESPALAPPEVQIDMVAQQQNK*E 292
           GDANLHFVESPALAPPEVQID+ AQQQ++ E
Sbjct: 172 GDANLHFVESPALAPPEVQIDLAAQQQHEAE 202


>gb|AFD93408.1| Ras-like GTP-binding protein 2, partial [Dimocarpus longan]
          Length = 188

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/91 (94%), Positives = 89/91 (97%)
 Frame = +2

Query: 20  RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 199
           RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA
Sbjct: 80  RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLA 139

Query: 200 GDANLHFVESPALAPPEVQIDMVAQQQNK*E 292
           GDANLHFVESPALAPPEVQID+ AQQQ++ E
Sbjct: 140 GDANLHFVESPALAPPEVQIDLAAQQQHEAE 170


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