BLASTX nr result
ID: Panax21_contig00000464
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000464 (797 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera] 310 2e-82 ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot... 309 4e-82 ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot... 305 6e-81 ref|XP_002312895.1| predicted protein [Populus trichocarpa] gi|1... 286 3e-75 ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot... 285 8e-75 >emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera] Length = 1073 Score = 310 bits (795), Expect = 2e-82 Identities = 154/180 (85%), Positives = 166/180 (92%), Gaps = 2/180 (1%) Frame = -3 Query: 708 IKKKSDRMRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTK 529 I++ MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTK Sbjct: 50 IEEARSIMRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTK 109 Query: 528 AYRRLHGKDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMK 349 AYRRLHGKDMTQDSTFEFERKRNRPERYDRN+AENTLKAIKKI+KVRVDREARHH +RMK Sbjct: 110 AYRRLHGKDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMK 169 Query: 348 GKKSIERREAARELEQSIHMVKAPAALREESSLTLPKMKVKVS-QQSEENR-MEE*LAYY 175 GKK+ E+REAA+ELEQSIHMVKAPA L++E SLTLPK+KVKVS QQSEEN MEE + Y Sbjct: 170 GKKAKEQREAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEECFSTY 229 >ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis vinifera] gi|297734845|emb|CBI17079.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 309 bits (792), Expect = 4e-82 Identities = 152/168 (90%), Positives = 161/168 (95%), Gaps = 2/168 (1%) Frame = -3 Query: 687 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 508 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60 Query: 507 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKKSIER 328 KDMTQDSTFEFERKRNRPERYDRN+AENTLKAIKKI+KVRVDREARHH +RMKGKK+ E+ Sbjct: 61 KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120 Query: 327 REAARELEQSIHMVKAPAALREESSLTLPKMKVKVS-QQSEENR-MEE 190 REAA+ELEQSIHMVKAPA L++E SLTLPK+KVKVS QQSEEN MEE Sbjct: 121 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 168 >ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis vinifera] gi|297740070|emb|CBI30252.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 305 bits (782), Expect = 6e-81 Identities = 150/168 (89%), Positives = 159/168 (94%), Gaps = 2/168 (1%) Frame = -3 Query: 687 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 508 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60 Query: 507 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKKSIER 328 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKI+KVRVDREARHH +RMKGKK+ E+ Sbjct: 61 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120 Query: 327 REAARELEQSIHMVKAPAALREESSLTLPKMKVKVSQ-QSEENR-MEE 190 REAA+ELEQ IHMVKAPA L +E SLTLPK+KVKVS+ Q+EEN MEE Sbjct: 121 REAAKELEQGIHMVKAPAVLEKEPSLTLPKIKVKVSRPQAEENHPMEE 168 >ref|XP_002312895.1| predicted protein [Populus trichocarpa] gi|118482826|gb|ABK93329.1| unknown [Populus trichocarpa] gi|222849303|gb|EEE86850.1| predicted protein [Populus trichocarpa] Length = 168 Score = 286 bits (733), Expect = 3e-75 Identities = 141/168 (83%), Positives = 154/168 (91%), Gaps = 2/168 (1%) Frame = -3 Query: 687 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 508 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60 Query: 507 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKKSIER 328 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKI+KVR DR A H + R+K +K ER Sbjct: 61 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRSDRAANHIEKRLKVRKGKER 120 Query: 327 REAARELEQSIHMVKAPAALREESSLTLPKMKVKVSQ-QSEENR-MEE 190 REA +ELEQSIH+VKAP LR++ SLTLPK+KV+VSQ +SE+N+ MEE Sbjct: 121 REAQKELEQSIHLVKAPQVLRQDQSLTLPKIKVQVSQPKSEQNQAMEE 168 >ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine max] Length = 168 Score = 285 bits (729), Expect = 8e-75 Identities = 140/168 (83%), Positives = 151/168 (89%), Gaps = 2/168 (1%) Frame = -3 Query: 687 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 508 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60 Query: 507 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKKSIER 328 KDMTQDSTFEFERKRNRPERYDRNLAEN LKAI KI+K+RV RE RHHK RMKGKK Sbjct: 61 KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120 Query: 327 REAARELEQSIHMVKAPAALREESSLTLPKMKVKVS-QQSEENR-MEE 190 +EA +ELEQ I +VKAP+ L+++ SLTLPK+KVKVS QQSEEN MEE Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168