BLASTX nr result

ID: Panax21_contig00000463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000463
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   291   7e-77
ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   290   2e-76
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...   283   2e-74
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   268   5e-70
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   267   1e-69

>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  291 bits (745), Expect = 7e-77
 Identities = 143/160 (89%), Positives = 149/160 (93%), Gaps = 1/160 (0%)
 Frame = -1

Query: 624 YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER 445
           YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER
Sbjct: 70  YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER 129

Query: 444 KRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKNTIERREAVKELEQSIHM 265
           KRNRPERYDRN+AENTLKAIKKI+KVRVDREARHH +RMKGK   E+REA KELEQSIHM
Sbjct: 130 KRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQREAAKELEQSIHM 189

Query: 264 VKAPAALQEEPSLTLPKIKVKVSQQQSEENR-MEE*FGQF 148
           VKAPA LQ+EPSLTLPKIKVKVSQQQSEEN  MEE F  +
Sbjct: 190 VKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEECFSTY 229


>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  290 bits (741), Expect = 2e-76
 Identities = 142/155 (91%), Positives = 147/155 (94%), Gaps = 1/155 (0%)
 Frame = -1

Query: 624 YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER 445
           YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER
Sbjct: 14  YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER 73

Query: 444 KRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKNTIERREAVKELEQSIHM 265
           KRNRPERYDRN+AENTLKAIKKI+KVRVDREARHH +RMKGK   E+REA KELEQSIHM
Sbjct: 74  KRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQREAAKELEQSIHM 133

Query: 264 VKAPAALQEEPSLTLPKIKVKVSQQQSEENR-MEE 163
           VKAPA LQ+EPSLTLPKIKVKVSQQQSEEN  MEE
Sbjct: 134 VKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  283 bits (723), Expect = 2e-74
 Identities = 138/155 (89%), Positives = 145/155 (93%), Gaps = 1/155 (0%)
 Frame = -1

Query: 624 YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER 445
           YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER
Sbjct: 14  YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER 73

Query: 444 KRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKNTIERREAVKELEQSIHM 265
           KRNRPERYDRNLAENTLKAIKKI+KVRVDREARHH +RMKGK   E+REA KELEQ IHM
Sbjct: 74  KRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQREAAKELEQGIHM 133

Query: 264 VKAPAALQEEPSLTLPKIKVKVSQQQSEENR-MEE 163
           VKAPA L++EPSLTLPKIKVKVS+ Q+EEN  MEE
Sbjct: 134 VKAPAVLEKEPSLTLPKIKVKVSRPQAEENHPMEE 168


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  268 bits (686), Expect = 5e-70
 Identities = 132/155 (85%), Positives = 140/155 (90%), Gaps = 1/155 (0%)
 Frame = -1

Query: 624 YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER 445
           YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HGKDMTQDSTFEFER
Sbjct: 14  YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFER 73

Query: 444 KRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKNTIERREAVKELEQSIHM 265
           KRNRPERYDRNLAEN LKAI KI+K+RV RE RHHK RMKGK     +EAVKELEQ I +
Sbjct: 74  KRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLLKEAVKELEQGISL 133

Query: 264 VKAPAALQEEPSLTLPKIKVKVSQQQSEENR-MEE 163
           VKAP+ LQ++PSLTLPKIKVKVSQQQSEEN  MEE
Sbjct: 134 VKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  267 bits (683), Expect = 1e-69
 Identities = 131/155 (84%), Positives = 139/155 (89%), Gaps = 1/155 (0%)
 Frame = -1

Query: 624 YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFER 445
           YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HGKDMTQDSTFEFER
Sbjct: 14  YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFER 73

Query: 444 KRNRPERYDRNLAENTLKAIKKIEKVRVDREARHHKMRMKGKNTIERREAVKELEQSIHM 265
           KRNRPERYDRNLAEN LK I KI+K+RV RE RHHK RMKGK     +EAVKELEQ I +
Sbjct: 74  KRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLLKEAVKELEQGISL 133

Query: 264 VKAPAALQEEPSLTLPKIKVKVSQQQSEENR-MEE 163
           VKAP+ LQ++PSLTLPKIKVKVSQQQSEEN  MEE
Sbjct: 134 VKAPSVLQQDPSLTLPKIKVKVSQQQSEENHAMEE 168


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