BLASTX nr result

ID: Panax21_contig00000451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000451
         (1987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510603.1| Plastocyanin A, chloroplast precursor, putat...   213   2e-52
gb|AFK36672.1| unknown [Lotus japonicus] gi|388497476|gb|AFK3680...   200   1e-48
gb|ACV32157.1| chloroplast plastocyanin precursor [Nicotiana ben...   199   2e-48
ref|XP_002307754.1| predicted protein [Populus trichocarpa] gi|1...   198   5e-48
gb|AFK44580.1| unknown [Lotus japonicus]                              197   7e-48

>ref|XP_002510603.1| Plastocyanin A, chloroplast precursor, putative [Ricinus communis]
           gi|223551304|gb|EEF52790.1| Plastocyanin A, chloroplast
           precursor, putative [Ricinus communis]
          Length = 168

 Score =  213 bits (542), Expect = 2e-52
 Identities = 110/169 (65%), Positives = 123/169 (72%)
 Frame = -2

Query: 585 MATITSAAVSIPSFTGLXXXXXXXXXXXXXXXXXXAPVPKLSLKASMKEVGXXXXXXXXX 406
           MAT+TSAAV+IPSFTGL                    +P++S+KASMKEVG         
Sbjct: 1   MATVTSAAVAIPSFTGLKAASAASTKVNASAKVAAPSLPRMSIKASMKEVGVAVMATAAS 60

Query: 405 XXXXXXXXXAVEVLLGSDDGGLAFVPREFSVASGEKIEFKNNAGFPHNVVFDEDEVPSGV 226
                     +E+LLGSDDGGLAFVP  FSVA GEKI FKNNAGFPHN+VFDEDEVPSGV
Sbjct: 61  AMLASNAMA-IEILLGSDDGGLAFVPNSFSVAPGEKIVFKNNAGFPHNIVFDEDEVPSGV 119

Query: 225 NASAISMSEEDLLNGPGETYSVTLTEKGTYKFYCSPHQGAGMVGQVTVN 79
           +A  ISMSEEDLLNGPGETY+VTLTEKGTY FYC+PHQGAGMVG+VTVN
Sbjct: 120 DAGKISMSEEDLLNGPGETYAVTLTEKGTYSFYCAPHQGAGMVGKVTVN 168


>gb|AFK36672.1| unknown [Lotus japonicus] gi|388497476|gb|AFK36804.1| unknown
           [Lotus japonicus]
          Length = 167

 Score =  200 bits (508), Expect = 1e-48
 Identities = 107/169 (63%), Positives = 118/169 (69%)
 Frame = -2

Query: 585 MATITSAAVSIPSFTGLXXXXXXXXXXXXXXXXXXAPVPKLSLKASMKEVGXXXXXXXXX 406
           MAT+TS AV+IPSFTGL                    +P+LS+KAS+K+ G         
Sbjct: 1   MATVTSTAVAIPSFTGLKSAGSKVSASAKVSSSPSQ-MPRLSVKASLKDFGVAVVATAAS 59

Query: 405 XXXXXXXXXAVEVLLGSDDGGLAFVPREFSVASGEKIEFKNNAGFPHNVVFDEDEVPSGV 226
                     +E+LLGSDDGGLAFVP  FSVA GEKI FKNNAGFPHNVVFDEDEVP GV
Sbjct: 60  AVLASNAMA-IEILLGSDDGGLAFVPNSFSVAPGEKITFKNNAGFPHNVVFDEDEVPGGV 118

Query: 225 NASAISMSEEDLLNGPGETYSVTLTEKGTYKFYCSPHQGAGMVGQVTVN 79
           +AS ISMS+EDLLN PGETYSVTL  KGTYKFYCSPHQGAGMVG VTVN
Sbjct: 119 DASKISMSDEDLLNAPGETYSVTLDAKGTYKFYCSPHQGAGMVGSVTVN 167


>gb|ACV32157.1| chloroplast plastocyanin precursor [Nicotiana benthamiana]
          Length = 169

 Score =  199 bits (507), Expect = 2e-48
 Identities = 106/170 (62%), Positives = 121/170 (71%), Gaps = 1/170 (0%)
 Frame = -2

Query: 585 MATITSAAVSIPSFTGLXXXXXXXXXXXXXXXXXXA-PVPKLSLKASMKEVGXXXXXXXX 409
           MAT+TSAAV+IPSFTGL                  + P  KL++KAS+K+VG        
Sbjct: 1   MATVTSAAVAIPSFTGLKAGACSTSRVSTTAKVAASTPATKLAVKASLKDVGAVVVATAA 60

Query: 408 XXXXXXXXXXAVEVLLGSDDGGLAFVPREFSVASGEKIEFKNNAGFPHNVVFDEDEVPSG 229
                      +EVLLGSDDGGLAFVP  FSV+SGEKI FKNNAGFPHNVVFDEDE+P+G
Sbjct: 61  SAMLASNAMA-IEVLLGSDDGGLAFVPGNFSVSSGEKITFKNNAGFPHNVVFDEDEIPAG 119

Query: 228 VNASAISMSEEDLLNGPGETYSVTLTEKGTYKFYCSPHQGAGMVGQVTVN 79
           V+ S ISM EE+ LNGPGETYSVTL EKGTY FYC+PHQGAGMVG+VTVN
Sbjct: 120 VDVSKISMPEEEYLNGPGETYSVTLNEKGTYSFYCAPHQGAGMVGKVTVN 169


>ref|XP_002307754.1| predicted protein [Populus trichocarpa]
           gi|1709651|sp|P00299.2|PLAS1_POPNI RecName:
           Full=Plastocyanin A, chloroplastic; Flags: Precursor
           gi|929813|emb|CAA90564.1| plastocyanin a [Populus nigra]
           gi|222857203|gb|EEE94750.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  198 bits (503), Expect = 5e-48
 Identities = 102/169 (60%), Positives = 119/169 (70%)
 Frame = -2

Query: 585 MATITSAAVSIPSFTGLXXXXXXXXXXXXXXXXXXAPVPKLSLKASMKEVGXXXXXXXXX 406
           MAT+TSAAVSIPSFTGL                  +P+P+LS+KASMK+VG         
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 405 XXXXXXXXXAVEVLLGSDDGGLAFVPREFSVASGEKIEFKNNAGFPHNVVFDEDEVPSGV 226
                     ++VLLG+DDG LAFVP EFS++ GEKI FKNNAGFPHN+VFDED +PSGV
Sbjct: 61  AMIASNAMA-IDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGV 119

Query: 225 NASAISMSEEDLLNGPGETYSVTLTEKGTYKFYCSPHQGAGMVGQVTVN 79
           +AS ISMSEEDLLN  GET+ V L+ KG Y FYCSPHQGAGMVG+VTVN
Sbjct: 120 DASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168


>gb|AFK44580.1| unknown [Lotus japonicus]
          Length = 167

 Score =  197 bits (502), Expect = 7e-48
 Identities = 106/169 (62%), Positives = 117/169 (69%)
 Frame = -2

Query: 585 MATITSAAVSIPSFTGLXXXXXXXXXXXXXXXXXXAPVPKLSLKASMKEVGXXXXXXXXX 406
           MAT+TS AV+IPSFTGL                    +P+LS+KAS+K+ G         
Sbjct: 1   MATVTSTAVAIPSFTGLKSAGSKVSASAKVSSSPSQ-MPRLSVKASLKDFGVAVVATAAS 59

Query: 405 XXXXXXXXXAVEVLLGSDDGGLAFVPREFSVASGEKIEFKNNAGFPHNVVFDEDEVPSGV 226
                     +E+LLGSDDGGLAFVP  FSVA GEKI FKNNAGFPHNVVFDEDEVP GV
Sbjct: 60  AVLASNAMA-IEILLGSDDGGLAFVPNSFSVAPGEKITFKNNAGFPHNVVFDEDEVPGGV 118

Query: 225 NASAISMSEEDLLNGPGETYSVTLTEKGTYKFYCSPHQGAGMVGQVTVN 79
           +AS ISMS+EDLLN PGETYSVTL  KGTYKFYCSPHQGAG VG VTVN
Sbjct: 119 DASKISMSDEDLLNAPGETYSVTLDAKGTYKFYCSPHQGAGTVGSVTVN 167


Top