BLASTX nr result
ID: Panax21_contig00000416
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00000416 (1135 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis v... 81 5e-19 ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 74 7e-11 emb|CBI39117.3| unnamed protein product [Vitis vinifera] 74 7e-11 ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 73 2e-10 ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 72 3e-10 >ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis vinifera] gi|297742018|emb|CBI33805.3| unnamed protein product [Vitis vinifera] Length = 508 Score = 80.9 bits (198), Expect(2) = 5e-19 Identities = 53/137 (38%), Positives = 60/137 (43%), Gaps = 53/137 (38%) Frame = +1 Query: 883 SSLSEDQNQEMDTVDLDVVHVIAQTAHCIA------------------------------ 972 SSL++DQ+QE D VDLD+VHVIAQ+AHCIA Sbjct: 207 SSLNKDQHQEKDCVDLDLVHVIAQSAHCIAQGKVGSGFDVSSAVYGSQRYVRFSPEVLSS 266 Query: 973 -----------------------HERTKFSXXXXXXXXXGEXXXXXXXXXXMVGAVKKWQ 1083 HERTKFS GE MVGAVKKWQ Sbjct: 267 AQVAVKGLPIQEVIHDILKGNWDHERTKFSLPPLMTLLLGEPGAGGSSTPSMVGAVKKWQ 326 Query: 1084 KSDPQKSRDTWTKLSNA 1134 KSDP+KS +TW KLS A Sbjct: 327 KSDPEKSLETWRKLSAA 343 Score = 40.8 bits (94), Expect(2) = 5e-19 Identities = 22/40 (55%), Positives = 22/40 (55%) Frame = +2 Query: 764 NAGESNGENSKSEVAKTGLGXXXXXXXXXXXXXXXYFGVV 883 NA ESNGEN K EVAKTGLG YFGVV Sbjct: 165 NAEESNGENCKPEVAKTGLGSSAAMTTSVVAALLHYFGVV 204 >ref|XP_002270570.2| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Vitis vinifera] Length = 387 Score = 73.9 bits (180), Expect = 7e-11 Identities = 44/77 (57%), Positives = 52/77 (67%), Gaps = 2/77 (2%) Frame = +1 Query: 1 LPVDAIDTGLEDHIIQHLAATA-MGRVQHVALRDGSRIRSSTYALRQFLVFSTHPNSLSA 177 LPV D LE+ IIQHLAA A MGR H+A R+G R RSS + FLVFSTHPN+ ++ Sbjct: 122 LPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRSHFLVFSTHPNATAS 181 Query: 178 GLVSAPAAPVQ-GEPEP 225 G V PA+ VQ GE EP Sbjct: 182 GPV--PASLVQVGENEP 196 >emb|CBI39117.3| unnamed protein product [Vitis vinifera] Length = 391 Score = 73.9 bits (180), Expect = 7e-11 Identities = 44/77 (57%), Positives = 52/77 (67%), Gaps = 2/77 (2%) Frame = +1 Query: 1 LPVDAIDTGLEDHIIQHLAATA-MGRVQHVALRDGSRIRSSTYALRQFLVFSTHPNSLSA 177 LPV D LE+ IIQHLAA A MGR H+A R+G R RSS + FLVFSTHPN+ ++ Sbjct: 122 LPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRSHFLVFSTHPNATAS 181 Query: 178 GLVSAPAAPVQ-GEPEP 225 G V PA+ VQ GE EP Sbjct: 182 GPV--PASLVQVGENEP 196 >ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera] gi|296084011|emb|CBI24399.3| unnamed protein product [Vitis vinifera] Length = 393 Score = 72.8 bits (177), Expect = 2e-10 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 1/76 (1%) Frame = +1 Query: 1 LPVDAIDTGLEDHIIQHLAATA-MGRVQHVALRDGSRIRSSTYALRQFLVFSTHPNSLSA 177 LPV A D LE+ IIQHLAA A MGR +H+A R+G R RSS QFLVFS HP++ A Sbjct: 123 LPVGANDAELEERIIQHLAAAAAMGRARHIARREGQRTRSSAQGRPQFLVFSAHPSTPQA 182 Query: 178 GLVSAPAAPVQGEPEP 225 G S+ A +GE EP Sbjct: 183 GPASSSPAQ-RGEDEP 197 >ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max] Length = 398 Score = 72.0 bits (175), Expect = 3e-10 Identities = 43/77 (55%), Positives = 51/77 (66%), Gaps = 2/77 (2%) Frame = +1 Query: 1 LPVDAIDTGLEDHIIQHLAATA-MGRVQHVALRDGSRIRSSTYALRQFLVFSTHPNSLSA 177 LPV A D LE+ IIQHLAA A MGR +HVA R+G R RSS + FLVFSTHPN S Sbjct: 129 LPVGASDADLEERIIQHLAAAAAMGRARHVARREGQRNRSSAQGRQHFLVFSTHPN--SP 186 Query: 178 GLVSAPAAPVQ-GEPEP 225 + A ++P Q G+ EP Sbjct: 187 PMAPASSSPSQRGDDEP 203