BLASTX nr result

ID: Panax21_contig00000406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000406
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40096.3| unnamed protein product [Vitis vinifera]              241   2e-61
ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TA...   240   7e-61
gb|ABN08468.1| CMP/dCMP deaminase, zinc-binding [Medicago trunca...   218   4e-54
ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase...   216   8e-54
ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase...   216   1e-53

>emb|CBI40096.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  241 bits (616), Expect = 2e-61
 Identities = 125/190 (65%), Positives = 141/190 (74%)
 Frame = -1

Query: 697 KMAACGNEEFLDCAAYMXXXXXXXXXXLDCLEVPVGCVIVEDEKVIASGXXXXXXXXXXX 518
           +MA+ G E      A+M          LD LEVPVGCVIVED K+IA+G           
Sbjct: 15  QMASLGEENLPGTLAFMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETRNAT 74

Query: 517 XXXEMEAVDVLLEQWQKNGLSKAEVAKRFSKCTLYVTCEPCIMCAAALSILGINEVYYGC 338
              EMEA+DVLLEQWQKNGLSK EVA+ FSKC+LYVTCEPCIMCAA+LSILGI EVYYGC
Sbjct: 75  RHAEMEAIDVLLEQWQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVYYGC 134

Query: 337 ANDKFGGCGSILSLHTSRSESSTRVGVPEDRGFKCTGGIMASEAISLLRSFYEQGNPNAP 158
           ANDKFGGCGSILSLH+S S+  T  G P  +GFKCTGGIMA+EA+SLL+ FYEQGNPNAP
Sbjct: 135 ANDKFGGCGSILSLHSSSSKLLTS-GTPLVKGFKCTGGIMATEAVSLLQRFYEQGNPNAP 193

Query: 157 KPHRTPVQNL 128
           KPHR P Q +
Sbjct: 194 KPHRQPGQQV 203


>ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis] gi|223529101|gb|EEF31082.1| tRNA-specific
           adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
          Length = 223

 Score =  240 bits (612), Expect = 7e-61
 Identities = 124/180 (68%), Positives = 135/180 (75%)
 Frame = -1

Query: 685 CGNEEFLDCAAYMXXXXXXXXXXLDCLEVPVGCVIVEDEKVIASGXXXXXXXXXXXXXXE 506
           C +E F    AYM          LD LEVPVGCVIVED KVIASG              E
Sbjct: 39  CSSETF----AYMELALEQARHALDSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAE 94

Query: 505 MEAVDVLLEQWQKNGLSKAEVAKRFSKCTLYVTCEPCIMCAAALSILGINEVYYGCANDK 326
           MEA+DVLLEQWQK GLS +EVA++FSKC LYVTCEPCIMCAAALSILGI EVYYGCANDK
Sbjct: 95  MEAIDVLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDK 154

Query: 325 FGGCGSILSLHTSRSESSTRVGVPEDRGFKCTGGIMASEAISLLRSFYEQGNPNAPKPHR 146
           FGGCGSIL LH+S ++S T   V + +GFKCTGGIMASEA+SLLR FYEQGNPNAPKPHR
Sbjct: 155 FGGCGSILPLHSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQGNPNAPKPHR 214


>gb|ABN08468.1| CMP/dCMP deaminase, zinc-binding [Medicago truncatula]
          Length = 178

 Score =  218 bits (554), Expect = 4e-54
 Identities = 109/154 (70%), Positives = 120/154 (77%)
 Frame = -1

Query: 607 LEVPVGCVIVEDEKVIASGXXXXXXXXXXXXXXEMEAVDVLLEQWQKNGLSKAEVAKRFS 428
           LEVPVGCVIVED KVIASG              EMEA+DVLLEQWQKNGLS  EVAK+FS
Sbjct: 24  LEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLEQWQKNGLSMTEVAKKFS 83

Query: 427 KCTLYVTCEPCIMCAAALSILGINEVYYGCANDKFGGCGSILSLHTSRSESSTRVGVPED 248
            C+LYVTCEPCIMCA+ALS LGI EV+YGC+NDKFGGCGSILSLH S +       V  +
Sbjct: 84  NCSLYVTCEPCIMCASALSNLGIKEVFYGCSNDKFGGCGSILSLHLSDA-------VSPN 136

Query: 247 RGFKCTGGIMASEAISLLRSFYEQGNPNAPKPHR 146
           +GFKC GGIMA EA+ LLR+FYEQGNPNAPKPHR
Sbjct: 137 KGFKCAGGIMAEEAVLLLRTFYEQGNPNAPKPHR 170


>ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Cucumis
           sativus]
          Length = 191

 Score =  216 bits (551), Expect = 8e-54
 Identities = 108/159 (67%), Positives = 121/159 (76%)
 Frame = -1

Query: 607 LEVPVGCVIVEDEKVIASGXXXXXXXXXXXXXXEMEAVDVLLEQWQKNGLSKAEVAKRFS 428
           LEVPVGCVIVED  VIA+G              EMEA+D+L+E WQ++GLS +EVA +FS
Sbjct: 30  LEVPVGCVIVEDGMVIATGRNRTTETRNATRHAEMEAIDILIEAWQRDGLSTSEVADKFS 89

Query: 427 KCTLYVTCEPCIMCAAALSILGINEVYYGCANDKFGGCGSILSLHTSRSESSTRVGVPED 248
           KC LYVTCEPCIMCA+ALSI+GI EVYYGCANDKFGGCGSILSLH    E+ T  G    
Sbjct: 90  KCKLYVTCEPCIMCASALSIIGIKEVYYGCANDKFGGCGSILSLHLGSGEAPTS-GNGLG 148

Query: 247 RGFKCTGGIMASEAISLLRSFYEQGNPNAPKPHRTPVQN 131
           RGFKCT GIMASEA+ L RSFYEQGNPNAPKPHR  V +
Sbjct: 149 RGFKCTAGIMASEAVGLFRSFYEQGNPNAPKPHRPLVNH 187


>ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase 2 [Glycine max]
          Length = 182

 Score =  216 bits (549), Expect = 1e-53
 Identities = 111/170 (65%), Positives = 126/170 (74%)
 Frame = -1

Query: 655 AYMXXXXXXXXXXLDCLEVPVGCVIVEDEKVIASGXXXXXXXXXXXXXXEMEAVDVLLEQ 476
           A+M          LD LEVPVGCVIVED KVIASG              EMEA+DVLL Q
Sbjct: 8   AFMELAIQQAKLALDVLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAIDVLLGQ 67

Query: 475 WQKNGLSKAEVAKRFSKCTLYVTCEPCIMCAAALSILGINEVYYGCANDKFGGCGSILSL 296
           WQK+GLS +EVA++FS C+LYVTCEPCIMCA+ALSILGI EV+YGC+NDKFGGCGSILSL
Sbjct: 68  WQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCGSILSL 127

Query: 295 HTSRSESSTRVGVPEDRGFKCTGGIMASEAISLLRSFYEQGNPNAPKPHR 146
           H S + +     VP  + FKCTG IMASEA+ L R+FYEQGNPNAPKPHR
Sbjct: 128 HLSNT-APLNNEVPSGKCFKCTGRIMASEAVLLFRTFYEQGNPNAPKPHR 176


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