BLASTX nr result

ID: Panax21_contig00000401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000401
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314172.1| GRAS family transcription factor [Populus tr...   246   4e-63
ref|XP_002533753.1| transcription factor, putative [Ricinus comm...   242   8e-62
gb|AFH54539.1| GRAS family protein, partial [Dimocarpus longan]       234   2e-59
ref|XP_002314171.1| GRAS family transcription factor [Populus tr...   234   2e-59
ref|XP_002299866.1| GRAS family transcription factor [Populus tr...   233   4e-59

>ref|XP_002314172.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222850580|gb|EEE88127.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 762

 Score =  246 bits (628), Expect = 4e-63
 Identities = 111/141 (78%), Positives = 128/141 (90%)
 Frame = -3

Query: 818  PDIFVHAVVNGSYSAPFFVTRFREALFHYSAMFDMFDVTIPREDQQRLNFEREFCGREVM 639
            PDIFVHA+VNGSY+APFFVTRFREALFH+SA+FDM D  +PRED+ RL FE+EF GREVM
Sbjct: 622  PDIFVHAIVNGSYNAPFFVTRFREALFHFSALFDMLDTNMPREDKMRLKFEKEFYGREVM 681

Query: 638  NVVACEGAERVERPETYKQWQVRNMRAGFKPLPLNQELMKKLRYKVKAGYHKDFVFDEDG 459
            NV+ACEG+ERVERPETYKQWQVRNMRAG K LP++  L+KKL+ KVKAGYH+DFV DEDG
Sbjct: 682  NVIACEGSERVERPETYKQWQVRNMRAGLKQLPMDPLLIKKLKCKVKAGYHEDFVVDEDG 741

Query: 458  QWMLQGWKGRILYATSAWVPA 396
             WMLQGWKGRI+YA+SAW+PA
Sbjct: 742  NWMLQGWKGRIVYASSAWIPA 762


>ref|XP_002533753.1| transcription factor, putative [Ricinus communis]
            gi|223526341|gb|EEF28640.1| transcription factor,
            putative [Ricinus communis]
          Length = 764

 Score =  242 bits (617), Expect = 8e-62
 Identities = 107/142 (75%), Positives = 127/142 (89%)
 Frame = -3

Query: 821  NPDIFVHAVVNGSYSAPFFVTRFREALFHYSAMFDMFDVTIPREDQQRLNFEREFCGREV 642
            +PDIF+HA+VNGSYSAPFFVTRFRE+LFH+SA+FDMFD  + REDQ RL FE+EF GRE 
Sbjct: 623  SPDIFIHAIVNGSYSAPFFVTRFRESLFHFSALFDMFDTNMSREDQMRLKFEKEFYGREA 682

Query: 641  MNVVACEGAERVERPETYKQWQVRNMRAGFKPLPLNQELMKKLRYKVKAGYHKDFVFDED 462
            +NV+ACEG+ERVERPETYKQWQVR++RAG K LPL  +L+KKL+ +VK GYH DFV D+D
Sbjct: 683  LNVIACEGSERVERPETYKQWQVRSLRAGLKQLPLEPQLLKKLKCRVKEGYHNDFVVDQD 742

Query: 461  GQWMLQGWKGRILYATSAWVPA 396
            GQWMLQGWKGRI+YA+SAWVPA
Sbjct: 743  GQWMLQGWKGRIIYASSAWVPA 764


>gb|AFH54539.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 308

 Score =  234 bits (597), Expect = 2e-59
 Identities = 109/141 (77%), Positives = 124/141 (87%)
 Frame = -3

Query: 818 PDIFVHAVVNGSYSAPFFVTRFREALFHYSAMFDMFDVTIPREDQQRLNFEREFCGREVM 639
           PDIF+ A+VNGSY+APFFVTRFREALFH+SA+FDM+D+ I REDQ RL FE+EF GREV+
Sbjct: 169 PDIFIQAIVNGSYNAPFFVTRFREALFHFSALFDMWDMNISREDQMRLMFEKEFYGREVI 228

Query: 638 NVVACEGAERVERPETYKQWQVRNMRAGFKPLPLNQELMKKLRYKVKAGYHKDFVFDEDG 459
           NVVACEG ERVERPETYKQWQVRN RAGFK LP+  +LMKKLR K   GYH DF+ D+DG
Sbjct: 229 NVVACEGLERVERPETYKQWQVRNTRAGFKQLPVGPQLMKKLRCKA-TGYHDDFMVDQDG 287

Query: 458 QWMLQGWKGRILYATSAWVPA 396
           QWMLQGWKGRI+YA+SAWVPA
Sbjct: 288 QWMLQGWKGRIIYASSAWVPA 308


>ref|XP_002314171.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222850579|gb|EEE88126.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 794

 Score =  234 bits (597), Expect = 2e-59
 Identities = 103/142 (72%), Positives = 125/142 (88%)
 Frame = -3

Query: 821  NPDIFVHAVVNGSYSAPFFVTRFREALFHYSAMFDMFDVTIPREDQQRLNFEREFCGREV 642
            NPDIFVH ++NGSY+APFF+TRFREALF +S++FD+FD T+PREDQ+R+ FEREF G++ 
Sbjct: 653  NPDIFVHTIINGSYNAPFFLTRFREALFQFSSLFDIFDSTLPREDQERMMFEREFFGQDA 712

Query: 641  MNVVACEGAERVERPETYKQWQVRNMRAGFKPLPLNQELMKKLRYKVKAGYHKDFVFDED 462
            MNV+ACEG +RVERPETYKQWQVR +RAGFKPLP +QELM K+R K+K  YHKDFV DED
Sbjct: 713  MNVIACEGQDRVERPETYKQWQVRTVRAGFKPLPFDQELMTKVRGKLKNCYHKDFVVDED 772

Query: 461  GQWMLQGWKGRILYATSAWVPA 396
              WMLQGWKGRI++A+S WVPA
Sbjct: 773  NHWMLQGWKGRIIFASSCWVPA 794


>ref|XP_002299866.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222847124|gb|EEE84671.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 716

 Score =  233 bits (594), Expect = 4e-59
 Identities = 105/142 (73%), Positives = 120/142 (84%)
 Frame = -3

Query: 821  NPDIFVHAVVNGSYSAPFFVTRFREALFHYSAMFDMFDVTIPREDQQRLNFEREFCGREV 642
            NPDIFVH ++NGSY+APFF+TRFREALFH+S++FDMFD T+PREDQ R+ FE E  GR+ 
Sbjct: 575  NPDIFVHTIINGSYNAPFFLTRFREALFHFSSLFDMFDSTLPREDQARIMFEGELYGRDA 634

Query: 641  MNVVACEGAERVERPETYKQWQVRNMRAGFKPLPLNQELMKKLRYKVKAGYHKDFVFDED 462
            MNVVACEG ERVERPETYKQWQ R +RAGFK LPL Q+LM K R K+K  YHKDFV DED
Sbjct: 635  MNVVACEGQERVERPETYKQWQARTVRAGFKTLPLEQKLMTKFRGKLKTYYHKDFVIDED 694

Query: 461  GQWMLQGWKGRILYATSAWVPA 396
              WMLQGWKGRI+YA+S WVPA
Sbjct: 695  NDWMLQGWKGRIIYASSCWVPA 716


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