BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000394
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520518.1| protein with unknown function [Ricinus commu...   178   4e-43
ref|XP_003543528.1| PREDICTED: transcription initiation factor I...   166   1e-39
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...   164   6e-39
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241...   163   1e-38
ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38

>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
           gi|223540360|gb|EEF41931.1| protein with unknown
           function [Ricinus communis]
          Length = 383

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/133 (66%), Positives = 106/133 (79%), Gaps = 2/133 (1%)
 Frame = +2

Query: 29  TPLPGMAQTPLPGTAD-SSLYNVPTGGTPITPGEYSNDNGGVSEMKSGRPSQFMQPPSPW 205
           TPLPG AQTPLPG+ D SS+YN+PTG T   P   S D+GG +E K+GRPS +MQPPSPW
Sbjct: 100 TPLPGTAQTPLPGSVDNSSMYNIPTGPTSEYPTPVS-DSGGSTEAKAGRPSPYMQPPSPW 158

Query: 206 LNQRPPLDVNVAYDEGREEVDMGASHQPMTQDFLPMSAGKRKRDDFASQYRN-GYIPQQD 382
           +NQRPPLDVN+AY EGREE D G S+QP+TQDF   ++GKRKR+DFA+QY N G+IPQQD
Sbjct: 159 INQRPPLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKREDFAAQYNNGGFIPQQD 218

Query: 383 GAGDAISDELKVE 421
           GAGD   + L+VE
Sbjct: 219 GAGDTPFEVLQVE 231


>ref|XP_003543528.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform 2 [Glycine max]
          Length = 384

 Score =  166 bits (421), Expect = 1e-39
 Identities = 94/180 (52%), Positives = 115/180 (63%), Gaps = 6/180 (3%)
 Frame = +2

Query: 2   QTPLPGMA--QTPLPGMAQTPLPGTADSSLYNVPTGGTPITPGEY---SNDNGGVSEMKS 166
           +TP   M    TPL    QTPLPGT D+S YN+PTG     P +Y    ND GG ++ K 
Sbjct: 88  ETPTADMLFPPTPLQTPIQTPLPGTGDNSTYNIPTG-----PSDYPSSGNDTGGNADGKG 142

Query: 167 GRPSQFMQPPSPWLNQRPPLDVNVAYDEGREEVDMGASHQPMTQDFLPMSAGKRKRDDFA 346
            RP+ +MQ PSPW+NQRPPLDVNVAY EGR+E D G S+QP TQDF  M +GKRKR+D  
Sbjct: 143 ARPAPYMQSPSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLT 202

Query: 347 SQYR-NGYIPQQDGAGDAISDELKVEPFFCSVFVCAGKGTTAANQEFARGIRLPSRIPQV 523
           SQY   GYIPQQDGAGDA   + ++E F    ++   KG  +A+ E     R  SRIPQ+
Sbjct: 203 SQYNAGGYIPQQDGAGDATHGDFEIE-FLKIAYI--SKGKMSADLE-----RSTSRIPQL 254


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform 1 [Glycine max]
          Length = 391

 Score =  164 bits (416), Expect = 6e-39
 Identities = 93/184 (50%), Positives = 114/184 (61%), Gaps = 10/184 (5%)
 Frame = +2

Query: 2   QTPLPGMA--QTPLPGMAQTPLPGTADSSLYNVPTGGTPITPGEY---SNDNGGVSEMKS 166
           +TP   M    TPL    QTPLPGT D+S YN+PTG     P +Y    ND GG ++ K 
Sbjct: 88  ETPTADMLFPPTPLQTPIQTPLPGTGDNSTYNIPTG-----PSDYPSSGNDTGGNADGKG 142

Query: 167 GRPSQFMQPPSPWLNQRPPLDVNVAYDEGREEVDMGASHQPMTQDFLPMSAGKRKRDDFA 346
            RP+ +MQ PSPW+NQRPPLDVNVAY EGR+E D G S+QP TQDF  M +GKRKR+D  
Sbjct: 143 ARPAPYMQSPSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLT 202

Query: 347 SQYR-NGYIPQQDGAGDAISDELKVEPFFCSVFV----CAGKGTTAANQEFARGIRLPSR 511
           SQY   GYIPQQDGAGDA   + ++E     + +       KG  +A+ E     R  SR
Sbjct: 203 SQYNAGGYIPQQDGAGDATHGDFEIEVSGRGISINSHHTISKGKMSADLE-----RSTSR 257

Query: 512 IPQV 523
           IPQ+
Sbjct: 258 IPQL 261


>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
           gi|297746029|emb|CBI16085.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  163 bits (413), Expect = 1e-38
 Identities = 93/171 (54%), Positives = 112/171 (65%), Gaps = 6/171 (3%)
 Frame = +2

Query: 29  TPLPGMAQTPLPGTADSSLYNVPTGGTPITPGEY--SNDNGGVSEMKSGRPSQFMQPPSP 202
           TPL    QTPLPG  D+S+YN+PTG     P EY  + D GG ++MKSGRP  +M PPSP
Sbjct: 102 TPLQTPIQTPLPGMGDNSMYNIPTG-----PTEYPAAQDGGGATDMKSGRPPSYMPPPSP 156

Query: 203 WLNQRPPL--DVNVAYDEGREEVDMGASHQPMTQDFLPMSAGKRKRDDFASQYR-NGYIP 373
           W+ QRPPL  DVNVAY EGR+E D G S QP+TQDF  MS+GKRKR+DF SQY  +GYIP
Sbjct: 157 WMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSGYIP 216

Query: 374 QQDGAGDAISDELKVEPFFCSVFVCAGKGTTAANQE-FARGIRLPSRIPQV 523
           QQDGAGD   +  +VE    S  +      T AN+E F +      RIPQ+
Sbjct: 217 QQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIPQL 267


>ref|XP_002298340.1| predicted protein [Populus trichocarpa] gi|222845598|gb|EEE83145.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  163 bits (413), Expect = 1e-38
 Identities = 99/188 (52%), Positives = 119/188 (63%), Gaps = 14/188 (7%)
 Frame = +2

Query: 2   QTPLPGMAQTPLPGMAQTPLPGTAD-SSLYNVPTGGTPITPGEYSNDNGGVSEMKSGRPS 178
           QTPLPG  QTPLPG   TPLPG+ D SS+YN+ TG +   P   S D GG +++K+GRPS
Sbjct: 106 QTPLPGNVQTPLPGNVPTPLPGSVDNSSMYNISTGSSSDYPTPVS-DAGGSTDVKAGRPS 164

Query: 179 QFMQPPSPWLNQRPPLDVNV------------AYDEGREEVDMGASHQPMTQDFLPMSAG 322
            FMQ PSP ++QRPPLDVNV            AY EGR+EVD G SHQ +TQDF  MS+G
Sbjct: 165 HFMQSPSPLMHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQDFF-MSSG 223

Query: 323 KRKRDDFASQYRNG-YIPQQDGAGDAISDELKVEPFFCSVFVCAGKGTTAANQEFARGIR 499
           KRKR DFA +Y NG +IPQQDGA D+ S+  +VE   C         TT   +  AR  R
Sbjct: 224 KRKRGDFAPKYNNGGFIPQQDGAVDSASEVSQVE---CDTI------TTKNREILARVSR 274

Query: 500 LPSRIPQV 523
              +IPQV
Sbjct: 275 SYVKIPQV 282