BLASTX nr result

ID: Panax21_contig00000373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000373
         (2516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD30220.1|AC007202_2 Is a member of PF|00004 ATPases associa...    59   6e-06
ref|NP_565212.1| cell division protease ftsH-12 [Arabidopsis tha...    59   6e-06

>gb|AAD30220.1|AC007202_2 Is a member of PF|00004 ATPases associated with various cellular
            activities (AAA) family. ESTs gb|T43031, gb|R64750,
            gb|AA394742 and gb|AI100347 come from this gene
            [Arabidopsis thaliana]
          Length = 998

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -2

Query: 1639 NGTLTHDSFYVGKNAWDDEVETSHDDVKDTVNQDGRLNIVEKKPI-QDLGISG 1484
            +GTL HDS YVG+NAWDD++ET+   +K  + ++ R+    KK + QDLG+SG
Sbjct: 229  DGTLVHDSSYVGENAWDDDLETTEGSLKKIIGRNARIQTEAKKKLSQDLGVSG 281


>ref|NP_565212.1| cell division protease ftsH-12 [Arabidopsis thaliana]
            gi|190359474|sp|Q9SAJ3.2|FTSHC_ARATH RecName:
            Full=ATP-dependent zinc metalloprotease FTSH 12,
            chloroplastic; Short=AtFTSH12; Flags: Precursor
            gi|222424637|dbj|BAH20273.1| AT1G79560 [Arabidopsis
            thaliana] gi|332198143|gb|AEE36264.1| cell division
            protease ftsH-12 [Arabidopsis thaliana]
          Length = 1008

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -2

Query: 1639 NGTLTHDSFYVGKNAWDDEVETSHDDVKDTVNQDGRLNIVEKKPI-QDLGISG 1484
            +GTL HDS YVG+NAWDD++ET+   +K  + ++ R+    KK + QDLG+SG
Sbjct: 229  DGTLVHDSSYVGENAWDDDLETTEGSLKKIIGRNARIQTEAKKKLSQDLGVSG 281


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