BLASTX nr result

ID: Panax21_contig00000371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000371
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]       462   e-128
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]                 461   e-128
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]                 460   e-127
ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...   459   e-127
ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...   459   e-127

>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
          Length = 314

 Score =  462 bits (1188), Expect = e-128
 Identities = 229/238 (96%), Positives = 235/238 (98%)
 Frame = -1

Query: 716 SKVVVEPHRHEGVFIAKGKEDALCTKNMVPGEAVYNEKRVSVQNEDGTKVEYRVWNPFRS 537
           +KVVVEPHRH GVFIAKGKEDALCTKN+VPGEAVYNEKR+SVQNEDGTKVEYRVWNPFRS
Sbjct: 74  NKVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRS 133

Query: 536 KLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDLVGPSGVVYAVEFSHRSGRDLVN 357
           KLAAAILGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP GVVYAVEFSHRSGRDLVN
Sbjct: 134 KLAAAILGGVDDIWIKPGAKVLYLGAASGTTVSHVSDLVGPGGVVYAVEFSHRSGRDLVN 193

Query: 356 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 177
           MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI
Sbjct: 194 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 253

Query: 176 SIKANCIDSTVPAEAVFAQEVKKLQADQFKPSEQVTLEPFERDHACVVGAYRVPKKQK 3
           SIKANCIDSTVPAEAVFAQEVKKLQA+QFKP EQVTLEPFERDHACVVGAYRVPKKQK
Sbjct: 254 SIKANCIDSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVGAYRVPKKQK 311


>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  461 bits (1187), Expect = e-128
 Identities = 228/238 (95%), Positives = 235/238 (98%)
 Frame = -1

Query: 716 SKVVVEPHRHEGVFIAKGKEDALCTKNMVPGEAVYNEKRVSVQNEDGTKVEYRVWNPFRS 537
           +KVVVEPHRH GVFIAKGKEDALCTKN+VPGEAVYNEKR+SVQNEDGTKVEYRVWNPFRS
Sbjct: 74  NKVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRS 133

Query: 536 KLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDLVGPSGVVYAVEFSHRSGRDLVN 357
           KLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP GVVYAVEFSHRSGRDLVN
Sbjct: 134 KLAAAVLGGVDDIWIKPGAKVLYLGAASGTTVSHVSDLVGPGGVVYAVEFSHRSGRDLVN 193

Query: 356 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 177
           MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI
Sbjct: 194 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 253

Query: 176 SIKANCIDSTVPAEAVFAQEVKKLQADQFKPSEQVTLEPFERDHACVVGAYRVPKKQK 3
           SIKANCIDSTVPAEAVFAQEVKKLQA+QFKP EQVTLEPFERDHACVVGAYRVPKKQK
Sbjct: 254 SIKANCIDSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVGAYRVPKKQK 311


>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  460 bits (1184), Expect = e-127
 Identities = 227/238 (95%), Positives = 235/238 (98%)
 Frame = -1

Query: 716 SKVVVEPHRHEGVFIAKGKEDALCTKNMVPGEAVYNEKRVSVQNEDGTKVEYRVWNPFRS 537
           +KVVVEPHRH GVFIAKGKEDALCTKN+VPGEAVYNEKR+SVQNEDGTKVEYRVWNPFRS
Sbjct: 74  NKVVVEPHRHGGVFIAKGKEDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRS 133

Query: 536 KLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDLVGPSGVVYAVEFSHRSGRDLVN 357
           KLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSDLVGP GVVYAVEFSHRSGRDLVN
Sbjct: 134 KLAAAVLGGVDDIWIKPGAKVLYLGAASGTTVSHVSDLVGPGGVVYAVEFSHRSGRDLVN 193

Query: 356 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 177
           MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFV+
Sbjct: 194 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVM 253

Query: 176 SIKANCIDSTVPAEAVFAQEVKKLQADQFKPSEQVTLEPFERDHACVVGAYRVPKKQK 3
           SIKANCIDSTVPAEAVFAQEVKKLQA+QFKP EQVTLEPFERDHACVVGAYRVPKKQK
Sbjct: 254 SIKANCIDSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVGAYRVPKKQK 311


>ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 2
           [Vitis vinifera]
          Length = 316

 Score =  459 bits (1180), Expect = e-127
 Identities = 227/238 (95%), Positives = 234/238 (98%)
 Frame = -1

Query: 716 SKVVVEPHRHEGVFIAKGKEDALCTKNMVPGEAVYNEKRVSVQNEDGTKVEYRVWNPFRS 537
           S+VVVEPHRHEGVFIAKGKEDAL TKNMVPGEAVYNEKR+SVQNEDG+K+EYRVWNPFRS
Sbjct: 76  SRVVVEPHRHEGVFIAKGKEDALVTKNMVPGEAVYNEKRISVQNEDGSKIEYRVWNPFRS 135

Query: 536 KLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDLVGPSGVVYAVEFSHRSGRDLVN 357
           KLAAAILGGVD IWIKPGARVLYLGAASGTTVSHVSD+VGP+GVVYAVEFSHRSGRDLVN
Sbjct: 136 KLAAAILGGVDEIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVN 195

Query: 356 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 177
           MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI
Sbjct: 196 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 255

Query: 176 SIKANCIDSTVPAEAVFAQEVKKLQADQFKPSEQVTLEPFERDHACVVGAYRVPKKQK 3
           SIKANCIDSTVPAEAVFAQEVKKLQAD FKPSEQVTLEPFERDHACVVG YR+PKKQK
Sbjct: 256 SIKANCIDSTVPAEAVFAQEVKKLQADMFKPSEQVTLEPFERDHACVVGGYRMPKKQK 313


>ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 1
           [Vitis vinifera]
          Length = 311

 Score =  459 bits (1180), Expect = e-127
 Identities = 227/238 (95%), Positives = 234/238 (98%)
 Frame = -1

Query: 716 SKVVVEPHRHEGVFIAKGKEDALCTKNMVPGEAVYNEKRVSVQNEDGTKVEYRVWNPFRS 537
           S+VVVEPHRHEGVFIAKGKEDAL TKNMVPGEAVYNEKR+SVQNEDG+K+EYRVWNPFRS
Sbjct: 71  SRVVVEPHRHEGVFIAKGKEDALVTKNMVPGEAVYNEKRISVQNEDGSKIEYRVWNPFRS 130

Query: 536 KLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDLVGPSGVVYAVEFSHRSGRDLVN 357
           KLAAAILGGVD IWIKPGARVLYLGAASGTTVSHVSD+VGP+GVVYAVEFSHRSGRDLVN
Sbjct: 131 KLAAAILGGVDEIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVN 190

Query: 356 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 177
           MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI
Sbjct: 191 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 250

Query: 176 SIKANCIDSTVPAEAVFAQEVKKLQADQFKPSEQVTLEPFERDHACVVGAYRVPKKQK 3
           SIKANCIDSTVPAEAVFAQEVKKLQAD FKPSEQVTLEPFERDHACVVG YR+PKKQK
Sbjct: 251 SIKANCIDSTVPAEAVFAQEVKKLQADMFKPSEQVTLEPFERDHACVVGGYRMPKKQK 308


Top