BLASTX nr result

ID: Panax21_contig00000364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000364
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273636.1| PREDICTED: synaptic vesicle 2-related protei...    88   6e-16
emb|CAN64534.1| hypothetical protein VITISV_042940 [Vitis vinifera]    88   6e-16
ref|XP_002330449.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
gb|ABK96271.1| unknown [Populus trichocarpa x Populus deltoides]       86   4e-15
ref|XP_003604112.1| Synaptic vesicle 2-related protein [Medicago...    85   7e-15

>ref|XP_002273636.1| PREDICTED: synaptic vesicle 2-related protein [Vitis vinifera]
           gi|297735684|emb|CBI18371.3| unnamed protein product
           [Vitis vinifera]
          Length = 495

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/79 (58%), Positives = 51/79 (64%)
 Frame = +3

Query: 3   YAPEIYPTSMRATGVGVASAVGRIGGMISPLVAVQLVTGCHQXXXXXXXXXXXXXXXXXX 182
           YAPEIYPTS+R TGVGVAS+VGRIGGM+ PLVAV LV GCHQ                  
Sbjct: 410 YAPEIYPTSVRTTGVGVASSVGRIGGMLCPLVAVGLVHGCHQAAAVILFEIVIFISGICV 469

Query: 183 XXXPFETKGRELADIVAIS 239
              PFETKGREL D ++ S
Sbjct: 470 ILFPFETKGRELKDTLSSS 488


>emb|CAN64534.1| hypothetical protein VITISV_042940 [Vitis vinifera]
          Length = 461

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/79 (58%), Positives = 51/79 (64%)
 Frame = +3

Query: 3   YAPEIYPTSMRATGVGVASAVGRIGGMISPLVAVQLVTGCHQXXXXXXXXXXXXXXXXXX 182
           YAPEIYPTS+R TGVGVAS+VGRIGGM+ PLVAV LV GCHQ                  
Sbjct: 376 YAPEIYPTSVRTTGVGVASSVGRIGGMLCPLVAVGLVHGCHQAAAVILFEIVIFISGICV 435

Query: 183 XXXPFETKGRELADIVAIS 239
              PFETKGREL D ++ S
Sbjct: 436 ILFPFETKGRELKDTLSSS 454


>ref|XP_002330449.1| predicted protein [Populus trichocarpa] gi|222871861|gb|EEF08992.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/77 (55%), Positives = 50/77 (64%)
 Frame = +3

Query: 3   YAPEIYPTSMRATGVGVASAVGRIGGMISPLVAVQLVTGCHQXXXXXXXXXXXXXXXXXX 182
           YAPEIYPTS+R+TG+GVAS++GRIGGMI PLVAV LV GCHQ                  
Sbjct: 409 YAPEIYPTSVRSTGIGVASSMGRIGGMICPLVAVSLVQGCHQTAALILFVCIIFVAGCCV 468

Query: 183 XXXPFETKGRELADIVA 233
              PFETKG EL D ++
Sbjct: 469 MLFPFETKGLELTDSIS 485


>gb|ABK96271.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 131

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/80 (53%), Positives = 51/80 (63%)
 Frame = +3

Query: 3   YAPEIYPTSMRATGVGVASAVGRIGGMISPLVAVQLVTGCHQXXXXXXXXXXXXXXXXXX 182
           YAPE+YPT++RATG GVA+AVGRIGGM+ PLVAV LV GCH                   
Sbjct: 45  YAPEVYPTAIRATGAGVANAVGRIGGMVCPLVAVGLVAGCHLKEAIILFEVLIVISVVCV 104

Query: 183 XXXPFETKGRELADIVAISN 242
              PFET GREL+D +A S+
Sbjct: 105 LLFPFETSGRELSDSLAASD 124


>ref|XP_003604112.1| Synaptic vesicle 2-related protein [Medicago truncatula]
           gi|355505167|gb|AES86309.1| Synaptic vesicle 2-related
           protein [Medicago truncatula]
          Length = 499

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/77 (57%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   YAPEIYPTSMRATGVGVASAVGRIGGMISPLVAVQLVTGCHQXXXXXXXXXXXXXXXXXX 182
           YAPEIYPTS+R TGVGVAS+VGRIGGM+ PLVAV LV GCHQ                  
Sbjct: 415 YAPEIYPTSVRTTGVGVASSVGRIGGMLCPLVAVGLVHGCHQTAAVLLFIIVALVSGICV 474

Query: 183 XXXPFETKGRELADIVA 233
              PFET G+EL D V+
Sbjct: 475 VFFPFETMGQELQDTVS 491


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