BLASTX nr result

ID: Panax21_contig00000356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000356
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]   383   e-104
ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vi...   382   e-104
ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine ...   318   2e-84
ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...   312   1e-82
ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula] gi|...   308   1e-81

>emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
          Length = 1097

 Score =  383 bits (983), Expect = e-104
 Identities = 215/391 (54%), Positives = 258/391 (65%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1263 EAMEANKTGWDNLFEPYPFFESYKNYLQIDICAANDDDLRKWKGWVESRLRQLTLKIERD 1084
            E MEANK  W  L EPYPFFE+YKNYLQI+I A N DDLRKWKGWVESRLRQLTLKIER 
Sbjct: 526  EVMEANKADWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERH 585

Query: 1083 TFNMLQCHPHPGDFSDKTRPFHCSYFMGLQRKQGVPASEGEQFDIRLTVEEFKQYVASYM 904
            T+NMLQCHPHPGDFSDK+RPFHC YFMGLQRKQGVPASEGEQFDIRLTV+EFK  V  Y 
Sbjct: 586  TYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYT 645

Query: 903  SWKPGMKIHVTHVKRRNIPNFVFPGGIRP-RPAKVAGERRQVSEEIVSGKSCEDMAFTGI 727
             WKPGM+IHV HV+RRNIPNFVFPGG+RP RP KVA ERR+V E  VS ++  + A    
Sbjct: 646  LWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVASERRRVLEPNVSTQAVLEGA---- 701

Query: 726  TKDVRKRMLDDGDEGTALRATKCFASAAGSS-ESTGVSP-VKIVASCSKGGDSTDANGSG 553
             +D +KR  +D +  T  R  KC  +AA SS E    +P V  V +CS   DS D N  G
Sbjct: 702  -EDSKKRKREDENVETNSRNAKCLVAAASSSHEVLSSNPLVSTVNACSIKVDSMDINMLG 760

Query: 552  EDLKEIAQSNINEGSERLINSSDLCSRNGGETNDSVKYTPPVELVSVNGGPLSSSEAEKL 373
            +  KE  ++NI  G + L NS ++  +N GE + SV+ + P++ +S +GG  SS+EAEK+
Sbjct: 761  KTRKEKVENNIEHGLKNLNNSVEVPPQN-GEVDGSVRCSHPIKTLSSSGGSPSSTEAEKI 819

Query: 372  EIENIVSGPYCSHQXXXXXXXXXXXXLQYKDQMNNLGKSPNGGSRQSSTGKGASVVSVTT 193
             IE I+SGPY SHQ            ++YK+Q+ +   S  G S +SS    A     TT
Sbjct: 820  AIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEEPLTTT 879

Query: 192  SYGAGIHPRLPFNGSLEELEVLSANPFIFIG 100
            S G      L  NG LEELE     P +  G
Sbjct: 880  S-GTVPCTILSPNGGLEELEPAELMPPLSYG 909


>ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  382 bits (982), Expect = e-104
 Identities = 215/391 (54%), Positives = 258/391 (65%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1263 EAMEANKTGWDNLFEPYPFFESYKNYLQIDICAANDDDLRKWKGWVESRLRQLTLKIERD 1084
            E MEANK  W  L EPYPFFE+YKNYLQI+I A N DDLRKWKGWVESRLRQLTLKIER 
Sbjct: 346  EVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERH 405

Query: 1083 TFNMLQCHPHPGDFSDKTRPFHCSYFMGLQRKQGVPASEGEQFDIRLTVEEFKQYVASYM 904
            T+NMLQCHPHPGDFSDK+RPFHC YFMGLQRKQGVPASEGEQFDIRLTV+EFK  V  Y 
Sbjct: 406  TYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYT 465

Query: 903  SWKPGMKIHVTHVKRRNIPNFVFPGGIRP-RPAKVAGERRQVSEEIVSGKSCEDMAFTGI 727
             WKPGM+IHV HV+RRNIPNFVFPGG+RP RP KVA ERR+V E  VS ++  + A    
Sbjct: 466  LWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVASERRRVLEPNVSTQAVLEGA---- 521

Query: 726  TKDVRKRMLDDGDEGTALRATKCFASAAGSS-ESTGVSP-VKIVASCSKGGDSTDANGSG 553
             +D +KR  +D +  T  R  KC  +AA SS E    +P V  V +CS   DS D N  G
Sbjct: 522  -EDSKKRKREDENVETNSRNAKCLVAAASSSHEVLSSNPLVSTVNACSIKVDSMDINMLG 580

Query: 552  EDLKEIAQSNINEGSERLINSSDLCSRNGGETNDSVKYTPPVELVSVNGGPLSSSEAEKL 373
            +  KE  ++NI  G + L NS ++  +N GE + SV+ + P++ +S +GG  SS+EAEK+
Sbjct: 581  KTRKEKVENNIEHGLKNLNNSVEVPPQN-GEVDGSVRCSHPIKTLSSSGGSPSSTEAEKI 639

Query: 372  EIENIVSGPYCSHQXXXXXXXXXXXXLQYKDQMNNLGKSPNGGSRQSSTGKGASVVSVTT 193
             IE I+SGPY SHQ            ++YK+Q+ +   S  G S +SS    A     TT
Sbjct: 640  AIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEEPLTTT 699

Query: 192  SYGAGIHPRLPFNGSLEELEVLSANPFIFIG 100
            S G      L  NG LEELE     P +  G
Sbjct: 700  S-GTVPCTILSPNGGLEELEPAELMPPLSYG 729


>ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 757

 Score =  318 bits (815), Expect = 2e-84
 Identities = 187/385 (48%), Positives = 219/385 (56%), Gaps = 8/385 (2%)
 Frame = -2

Query: 1263 EAMEANKTGWDNLFEPYPFFESYKNYLQIDICAANDDDLRKWKGWVESRLRQLTLKIERD 1084
            EAMEA+K  WD LFEPYPFFESYKNYLQIDI A N DDLR+WKGWVESRLRQLTLKIER 
Sbjct: 346  EAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERH 405

Query: 1083 TFNMLQCHPHPGDFSDKTRPFHCSYFMGLQRKQGVPASEGEQFDIRLTVEEFKQYVASYM 904
            T+ MLQCHPHPG+FSD +RPFH  YFMGLQRKQGVP +EGEQFDIRLTVEEFK  V +Y 
Sbjct: 406  TYGMLQCHPHPGEFSDNSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYT 465

Query: 903  SWKPGMKIHVTHVKRRNIPNFVFPGGIRPR-PAKVAGERRQVSEEIVSGKSCEDMAFTGI 727
             WKPGM IHV+HVKRRNIPN++FPGG+RP  P+KV  E +Q S+  V G    +    G 
Sbjct: 466  LWKPGMNIHVSHVKRRNIPNYIFPGGVRPTFPSKVTAENKQSSKSRVPGHGQAEKPQGGK 525

Query: 726  T-----KDVRKRMLDDGDEGTALRATKCFASAAGSSESTG--VSPVKIVASCSKGGDSTD 568
            T      DVRKR   +       R +K   S A  S      +SP+   +SCS   D ++
Sbjct: 526  TVVVGADDVRKRKRSEDIMDNNPRNSKSPVSLAPPSREVNEDISPISASSSCSMKFDESE 585

Query: 567  ANGSGEDLKEIAQSNINEGSERLINSSDLCSRNGGETNDSVKYTPPVELVSVNGGPLSSS 388
             N  G    E          +  +NS          TN SV     V  V       +S 
Sbjct: 586  VNSIGGQKSE----------KPCLNSPGEIPSGDSGTNGSVTNNQQVNPVLAAADTSNSK 635

Query: 387  EAEKLEIENIVSGPYCSHQXXXXXXXXXXXXLQYKDQMNNLGKSPNGGSRQSSTGKGASV 208
            E EKL IE I+SGPY +HQ             QYK+Q  + G +    + +S   K A  
Sbjct: 636  EEEKLAIEKIMSGPYDAHQAFPEEPEELEDDTQYKNQDKDSGGNMK-NNMESLLSKPAVA 694

Query: 207  VSVTTSYGAGIHPRLPFNGSLEELE 133
                 S        L  N  LEELE
Sbjct: 695  EEPVISKEITCSTHLFSNEILEELE 719


>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
            gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
            putative [Ricinus communis]
          Length = 770

 Score =  312 bits (799), Expect = 1e-82
 Identities = 194/405 (47%), Positives = 237/405 (58%), Gaps = 16/405 (3%)
 Frame = -2

Query: 1263 EAMEANKTGWDNLFEPYPFFESYKNYLQIDICAANDDDLRKWKGWVESRLRQLTLKIERD 1084
            EAMEA+K  W+ LFE + FF++YKNYLQIDI A N+DDLRKWKGWVESRLRQLTLKIER 
Sbjct: 348  EAMEASKADWNTLFESFSFFDAYKNYLQIDIGAENEDDLRKWKGWVESRLRQLTLKIERH 407

Query: 1083 TFNMLQCHPHPGDFSDKTRPFHCSYFMGLQRKQGVPASEGEQFDIRLTVEEFKQYVASYM 904
            TFNMLQCHPHPG+F+DK+RP HCSYFMGLQRKQGVPA+EGEQFDIR+TVEEFK  V  Y 
Sbjct: 408  TFNMLQCHPHPGEFTDKSRPLHCSYFMGLQRKQGVPANEGEQFDIRITVEEFKISVNMYT 467

Query: 903  SWKPGMKIHVTHVKRRNIPNFVFPGGIRP-RPAKVAGERRQVSEEIVSGKSCEDMAFTGI 727
            SWKPGM+IHVTHVKRRNIP+FVFPGGIRP RP+K   + ++ S E    KS E    +  
Sbjct: 468  SWKPGMEIHVTHVKRRNIPSFVFPGGIRPSRPSKTTWDSKRSSAE----KSGEGKGVSDG 523

Query: 726  TKDVRKRMLDDGDEGTALRATKCFASAAGSSESTGVSPVKIVASCSKGGDSTDANGSGED 547
            + D  KR   D +   A +  K  +++  S E    SP     S       T  N  GE 
Sbjct: 524  SDDKGKRKRIDDNVANATKIAKPDSTSPLSGEVNNGSPSAGTVSLL----LTSTNAVGEP 579

Query: 546  LKEIAQSNINEGSERLINSSDLCS--RNGGETNDSVKYTPPVELVSVNGGPLSSSEAEKL 373
              E  ++N+   ++   NS DL     + GE N      P   L+ +N  P  S  AEKL
Sbjct: 580  RDEPVENNL---TDDFSNSKDLTGFYAHNGELN-----PPNKVLLGINEAP--SKVAEKL 629

Query: 372  EIENIVSGPYCSHQXXXXXXXXXXXXLQYKDQMNNLG---------KSPNGGSRQSSTGK 220
             IE I+SGPY ++Q             + + Q+ + G          SP   S  S+T K
Sbjct: 630  AIETIMSGPYVTNQALPQELDELEDDFECRTQVKDFGAGANTKDTNDSPIESSSASTTAK 689

Query: 219  ---GASVVS-VTTSYGAGIHPRLPFNGSLEELEVLSANPFIFIGV 97
                A V + V +S G      L  NG LEELE        F G+
Sbjct: 690  TLPNAPVAAPVISSNGTDPSTALCPNGGLEELEPAELVAPFFSGI 734


>ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula] gi|355495380|gb|AES76583.1|
            Poly(A) polymerase [Medicago truncatula]
          Length = 752

 Score =  308 bits (790), Expect = 1e-81
 Identities = 177/398 (44%), Positives = 229/398 (57%), Gaps = 9/398 (2%)
 Frame = -2

Query: 1263 EAMEANKTGWDNLFEPYPFFESYKNYLQIDICAANDDDLRKWKGWVESRLRQLTLKIERD 1084
            EAMEA+K  WD LFEPYPFFE+YKNYLQIDI A N DDLR+WKGWVESRLRQLTLKIE+ 
Sbjct: 346  EAMEASKADWDTLFEPYPFFEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKY 405

Query: 1083 TFNMLQCHPHPGDFSDKTRPFHCSYFMGLQRKQGVPASEGEQFDIRLTVEEFKQYVASYM 904
            T+ MLQCHP+PG+FSDK+R FH  YFMGLQRKQGVP SEGEQFDIR TVEEFK  V +Y 
Sbjct: 406  TYGMLQCHPYPGEFSDKSRSFHQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYT 465

Query: 903  SWKPGMKIHVTHVKRRNIPNFVFPGGIRPR-PAKVAGERRQVSEEIVSGKSCEDMAFTGI 727
            +WKPGM I V+HVKRRNIPNF+FPGG+RP  P++V GE R+ S+  V+G+S  + +  G 
Sbjct: 466  AWKPGMDIRVSHVKRRNIPNFIFPGGVRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGK 525

Query: 726  -----TKDVRKRMLDDGDEGTALRATKCFASAAGSSESTGVSPVKIVASCSKGGDSTDAN 562
                   D RKR   + +  + +  +    S    +     +P    +SCS   D ++ N
Sbjct: 526  AVVLGADDERKRKRLEDNNNSRVSKSSASVSPPNRNVPEDRNPFSATSSCSMKFDDSEVN 585

Query: 561  GSGEDLKEIAQSNINEGSERLINSSDLCSRNGGE--TNDSVKYTPPVELVSVNGGPLSSS 388
              G+                   S  LC ++ GE    DSV      +   ++    S++
Sbjct: 586  SMGDQ-----------------KSEKLCLKSVGEIPAGDSVTNGSATDNKQLDAPDTSNT 628

Query: 387  -EAEKLEIENIVSGPYCSHQXXXXXXXXXXXXLQYKDQMNNLGKSPNGGSRQSSTGKGAS 211
             E E+L IE+I++GPY +HQ            + Y++Q+N+ G S    +  SS      
Sbjct: 629  KEEERLAIEHIMAGPYEAHQALTEEPDELEQDMGYRNQVNDNGGSVKSNNFDSSNPNPVV 688

Query: 210  VVSVTTSYGAGIHPRLPFNGSLEELEVLSANPFIFIGV 97
            V     S           NG LEELE       +F G+
Sbjct: 689  VEDQVISKETVCSTHSFCNGGLEELEPAELTAPLFCGI 726


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