BLASTX nr result

ID: Panax21_contig00000350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000350
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]          100   9e-20
dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]          86   2e-15
dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]          86   2e-15
dbj|BAF52858.1| repressor of silencing 3 [Nicotiana tabacum]           80   2e-13
emb|CBI30244.3| unnamed protein product [Vitis vinifera]               74   1e-11

>dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]
          Length = 1796

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/119 (44%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
 Frame = -2

Query: 503 IVFSNVTHDKESNILQILDSNSHSVPRSPNDSNCSTTECLTKEKQARGVKRGHGSATGK- 327
           I+FS+ THDK+++IL++        P+SPN SNCS++ CL +E   R +KR H   T + 
Sbjct: 441 IIFSDETHDKQASILEM-------TPKSPNGSNCSSSACLIQETPERALKRRHSFRTNEA 493

Query: 326 ELCNINAIGAHHNSMQAYMEMFPVYQYDNDRIPGMYFPPIYKRKRTEKCHNSAASITMP 150
           EL + N +GA+ NSMQAY  + P  +       GM+FP IYK+KRTEK H +A S   P
Sbjct: 494 ELYSTNVMGAYFNSMQAYQAILPANEPYAHSTQGMHFPTIYKKKRTEKGHPTATSYAKP 552


>dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]
          Length = 1673

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
 Frame = -2

Query: 503 IVFSNVTHDKESNILQILDSNSHSVPRSPNDSNCSTTECLTKEKQARGVKRGHGSATGK- 327
           I FS++T DK+++I+Q+        P+SPN SNCS++ CL   K   G+KR H   T + 
Sbjct: 510 INFSDLTRDKQASIVQM-------TPQSPNCSNCSSSTCLPHGK---GLKRQHSYRTDEA 559

Query: 326 ELCNINAIGAHHNSMQAYMEMFPVYQYDNDRIPGMYFPPIYKRKRTEKCHNSAASITMPT 147
           +  ++NA G + NSMQAY  + P  + +     GM+ P IYK+KRTE+ H+SAA      
Sbjct: 560 QFYSLNARGVYFNSMQAYQAILPANEPEVYSNLGMHCPAIYKKKRTEEGHSSAAFY---- 615

Query: 146 VTAAQSPAKQTMEHPLKGTRSYPFTSEINCTSLAAQCNGTNTPIKTS 6
                      ++H         FTS+INC   ++QCN + +P   S
Sbjct: 616 -----------IKH---------FTSKINCVP-SSQCNISGSPSNNS 641


>dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]
          Length = 1673

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
 Frame = -2

Query: 503 IVFSNVTHDKESNILQILDSNSHSVPRSPNDSNCSTTECLTKEKQARGVKRGHGSATGK- 327
           I FS++T DK+++I+Q+        P+SPN SNCS++ CL   K   G+KR H   T + 
Sbjct: 510 INFSDLTRDKQASIVQM-------TPQSPNCSNCSSSTCLPHGK---GLKRQHSYRTDEA 559

Query: 326 ELCNINAIGAHHNSMQAYMEMFPVYQYDNDRIPGMYFPPIYKRKRTEKCHNSAASITMPT 147
           +  ++NA G + NSMQAY  + P  + +     GM+ P IYK+KRTE+ H+SAA      
Sbjct: 560 QFYSLNARGVYFNSMQAYQAILPANEPEVYSNLGMHCPAIYKKKRTEEGHSSAAFY---- 615

Query: 146 VTAAQSPAKQTMEHPLKGTRSYPFTSEINCTSLAAQCNGTNTPIKTS 6
                      ++H         FTS+INC   ++QCN + +P   S
Sbjct: 616 -----------IKH---------FTSKINCVP-SSQCNISGSPSNNS 641


>dbj|BAF52858.1| repressor of silencing 3 [Nicotiana tabacum]
          Length = 1662

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 1/167 (0%)
 Frame = -2

Query: 503 IVFSNVTHDKESNILQILDSNSHSVPRSPNDSNCSTTECLTKEKQARGVKRGHGSATGK- 327
           I FS++T DK+++ILQ+        P+S N SNCS++ CL   K   G+KR H   T + 
Sbjct: 524 INFSDLTRDKQASILQM-------TPQSLNCSNCSSSTCLPHGK---GLKRQHSYRTNEA 573

Query: 326 ELCNINAIGAHHNSMQAYMEMFPVYQYDNDRIPGMYFPPIYKRKRTEKCHNSAASITMPT 147
           +  ++NA G + NSMQAY  + P  + +     GM+ P  YK+KRTE+ H+SAAS     
Sbjct: 574 QFYSLNARGVYFNSMQAYQAILPANEPEVYSNLGMHCPATYKKKRTEEGHSSAASY---- 629

Query: 146 VTAAQSPAKQTMEHPLKGTRSYPFTSEINCTSLAAQCNGTNTPIKTS 6
                      ++H         FTSEIN    +++CN + +P   S
Sbjct: 630 -----------IKH---------FTSEINHVP-SSRCNISGSPSNNS 655


>emb|CBI30244.3| unnamed protein product [Vitis vinifera]
          Length = 1470

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
 Frame = -2

Query: 479 DKESNILQILDSNSHSVPRSPNDSNCSTTECLTKEKQARGVKRGHGSATGK-ELCNINAI 303
           DK+ NILQ           SPN++NCST+  L + +  RG KR H     K +   ++  
Sbjct: 289 DKQENILQ-----ESLKSMSPNNTNCSTSASLKEREHRRGTKRVHSHIVDKADPRTMSMN 343

Query: 302 GAHHNSMQAYMEMFPVYQYDNDRIPGMYFPPIYKRKRTEKCHNSAASITMPTVTA 138
           G  +NS+QAY   F   +   +R PGM+FP IYK+KRTEK  NS A+   P + A
Sbjct: 344 GNQYNSVQAYHAKFQANE--QNRNPGMHFPEIYKKKRTEKGLNSTATNLSPVMAA 396