BLASTX nr result

ID: Panax21_contig00000341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000341
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ57193.1| glyceraldehyde-3-phosphate dehydrogenase [Panax g...   494   e-137
gb|AFG28406.1| glyceraldehyde-3-phosphate dehydrogenase C1 [Pyru...   488   e-135
ref|XP_002263145.2| PREDICTED: glyceraldehyde-3-phosphate dehydr...   484   e-134
emb|CBI14856.3| unnamed protein product [Vitis vinifera]              484   e-134
gb|ABV02033.1| glyceraldehyde 3-phosphate dehydrogenase [Nicotia...   481   e-133

>gb|AAQ57193.1| glyceraldehyde-3-phosphate dehydrogenase [Panax ginseng]
          Length = 295

 Score =  494 bits (1271), Expect = e-137
 Identities = 250/278 (89%), Positives = 260/278 (93%)
 Frame = -2

Query: 1119 HELKVKDDNTLLFGEKPVKVFGIRNPEEIPWGEAGADFVVESTGVFTXXXXXXXXXXXXX 940
            HELKVKD+NTLLFGEKPVKVFGI NPEEIPWGEAGADFVVESTGVFT             
Sbjct: 17   HELKVKDNNTLLFGEKPVKVFGIGNPEEIPWGEAGADFVVESTGVFTDKDKAAAHLKGGA 76

Query: 939  XKVVISAPSKDAPMFVVGVNEKEYKPELNIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 760
             KVVISAPSKDAPMFVVGVNEKEY P+L+IVS+ASCTTNCLAPLAKVINDRFGIVEGLMT
Sbjct: 77   KKVVISAPSKDAPMFVVGVNEKEYTPDLHIVSSASCTTNCLAPLAKVINDRFGIVEGLMT 136

Query: 759  TVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 580
            TVHSITATQKTVDGPS+KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP
Sbjct: 137  TVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 196

Query: 579  TVDVSVVDLTVRLGKKASYDQIKAAIKEESEGKLKGILGYTEEDVVSTDFIGDSRSSIFD 400
            TVDVSVVDLTVRL KKASYD+IKAAIKEESEGKLKGILGYTE+DVVSTDF+GDSRSSIFD
Sbjct: 197  TVDVSVVDLTVRLAKKASYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFLGDSRSSIFD 256

Query: 399  AKAGIALNENFVKLVAWYDNEWGYSSRVVDLIVHMASI 286
            AKAGIALNENFVKLV WYDNEWGYSSRVVDL+VHMAS+
Sbjct: 257  AKAGIALNENFVKLVTWYDNEWGYSSRVVDLVVHMASV 294


>gb|AFG28406.1| glyceraldehyde-3-phosphate dehydrogenase C1 [Pyrus x bretschneideri]
          Length = 341

 Score =  488 bits (1255), Expect = e-135
 Identities = 247/277 (89%), Positives = 257/277 (92%)
 Frame = -2

Query: 1119 HELKVKDDNTLLFGEKPVKVFGIRNPEEIPWGEAGADFVVESTGVFTXXXXXXXXXXXXX 940
            HELKVKD  TLLFGEKPV VFGIRNPEEIPWGE+GADFVVESTGVFT             
Sbjct: 63   HELKVKDSKTLLFGEKPVTVFGIRNPEEIPWGESGADFVVESTGVFTDKEKAAAHIKGGA 122

Query: 939  XKVVISAPSKDAPMFVVGVNEKEYKPELNIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 760
             KV+ISAPSKDAPMFVVGVNEKEYKP+++I+SNASCTTNCLAPLAKVINDRFGIVEGLMT
Sbjct: 123  KKVIISAPSKDAPMFVVGVNEKEYKPDIHILSNASCTTNCLAPLAKVINDRFGIVEGLMT 182

Query: 759  TVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 580
            TVHSITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP
Sbjct: 183  TVHSITATQKTVDGPSQKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 242

Query: 579  TVDVSVVDLTVRLGKKASYDQIKAAIKEESEGKLKGILGYTEEDVVSTDFIGDSRSSIFD 400
            TVDVSVVDLTVRL K ASYDQIKAAIKEESEGKLKGILGYTE+DVVSTDFIGDSRSSIFD
Sbjct: 243  TVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDSRSSIFD 302

Query: 399  AKAGIALNENFVKLVAWYDNEWGYSSRVVDLIVHMAS 289
            AKAGIALN+NFVKLV+WYDNEWGYSSRVVDLIVH+AS
Sbjct: 303  AKAGIALNDNFVKLVSWYDNEWGYSSRVVDLIVHVAS 339


>ref|XP_002263145.2| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Vitis
            vinifera]
          Length = 337

 Score =  484 bits (1246), Expect = e-134
 Identities = 244/277 (88%), Positives = 256/277 (92%)
 Frame = -2

Query: 1119 HELKVKDDNTLLFGEKPVKVFGIRNPEEIPWGEAGADFVVESTGVFTXXXXXXXXXXXXX 940
            HELKVKD NTLLFGEKPV VFGIRNPEEIPWGE GA+FVVESTGVFT             
Sbjct: 59   HELKVKDSNTLLFGEKPVTVFGIRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGA 118

Query: 939  XKVVISAPSKDAPMFVVGVNEKEYKPELNIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 760
             KVVISAPSKDAPMFVVGVNEKEYKPEL+IVSNASCTTNCLAPLAKVINDRFGIVEGLMT
Sbjct: 119  KKVVISAPSKDAPMFVVGVNEKEYKPELHIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 178

Query: 759  TVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 580
            TVHSITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVP
Sbjct: 179  TVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVP 238

Query: 579  TVDVSVVDLTVRLGKKASYDQIKAAIKEESEGKLKGILGYTEEDVVSTDFIGDSRSSIFD 400
            TVDVSVVDLTVRL K A+Y+Q+KAAIKEESEGK+KGILGYTE+DVVSTDFIGD+RSSIFD
Sbjct: 239  TVDVSVVDLTVRLEKAATYEQVKAAIKEESEGKMKGILGYTEDDVVSTDFIGDNRSSIFD 298

Query: 399  AKAGIALNENFVKLVAWYDNEWGYSSRVVDLIVHMAS 289
            AKAGIALNE F+K+VAWYDNEWGYSSRV+DLIVHMAS
Sbjct: 299  AKAGIALNEKFLKIVAWYDNEWGYSSRVIDLIVHMAS 335


>emb|CBI14856.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  484 bits (1246), Expect = e-134
 Identities = 244/277 (88%), Positives = 256/277 (92%)
 Frame = -2

Query: 1119 HELKVKDDNTLLFGEKPVKVFGIRNPEEIPWGEAGADFVVESTGVFTXXXXXXXXXXXXX 940
            HELKVKD NTLLFGEKPV VFGIRNPEEIPWGE GA+FVVESTGVFT             
Sbjct: 65   HELKVKDSNTLLFGEKPVTVFGIRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGA 124

Query: 939  XKVVISAPSKDAPMFVVGVNEKEYKPELNIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 760
             KVVISAPSKDAPMFVVGVNEKEYKPEL+IVSNASCTTNCLAPLAKVINDRFGIVEGLMT
Sbjct: 125  KKVVISAPSKDAPMFVVGVNEKEYKPELHIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 184

Query: 759  TVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 580
            TVHSITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVP
Sbjct: 185  TVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVP 244

Query: 579  TVDVSVVDLTVRLGKKASYDQIKAAIKEESEGKLKGILGYTEEDVVSTDFIGDSRSSIFD 400
            TVDVSVVDLTVRL K A+Y+Q+KAAIKEESEGK+KGILGYTE+DVVSTDFIGD+RSSIFD
Sbjct: 245  TVDVSVVDLTVRLEKAATYEQVKAAIKEESEGKMKGILGYTEDDVVSTDFIGDNRSSIFD 304

Query: 399  AKAGIALNENFVKLVAWYDNEWGYSSRVVDLIVHMAS 289
            AKAGIALNE F+K+VAWYDNEWGYSSRV+DLIVHMAS
Sbjct: 305  AKAGIALNEKFLKIVAWYDNEWGYSSRVIDLIVHMAS 341


>gb|ABV02033.1| glyceraldehyde 3-phosphate dehydrogenase [Nicotiana langsdorffii x
            Nicotiana sanderae]
          Length = 340

 Score =  481 bits (1239), Expect = e-133
 Identities = 243/278 (87%), Positives = 257/278 (92%)
 Frame = -2

Query: 1119 HELKVKDDNTLLFGEKPVKVFGIRNPEEIPWGEAGADFVVESTGVFTXXXXXXXXXXXXX 940
            HELKVKD+ TLLFGEK V+VFGIRNPEEIPW EAGADFVVESTGVFT             
Sbjct: 62   HELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFTDKDKAAAHLKGGA 121

Query: 939  XKVVISAPSKDAPMFVVGVNEKEYKPELNIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 760
             KVVISAPSKDAPMFVVGVNEKEYKPE +IVSNASCTTNCLAPLAKVINDRFGIVEGLMT
Sbjct: 122  KKVVISAPSKDAPMFVVGVNEKEYKPEYDIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 181

Query: 759  TVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 580
            TVHS+TATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP
Sbjct: 182  TVHSLTATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 241

Query: 579  TVDVSVVDLTVRLGKKASYDQIKAAIKEESEGKLKGILGYTEEDVVSTDFIGDSRSSIFD 400
            TVDVSVVDLTVRL K+ASYD+IKAAIKEESEGKLKGILG+TE+DVVSTDF+GDSRSSIFD
Sbjct: 242  TVDVSVVDLTVRLEKEASYDEIKAAIKEESEGKLKGILGFTEDDVVSTDFVGDSRSSIFD 301

Query: 399  AKAGIALNENFVKLVAWYDNEWGYSSRVVDLIVHMASI 286
            AKAGIAL++NFVKLV+WYDNEWGYSSRV+DLI HMAS+
Sbjct: 302  AKAGIALSKNFVKLVSWYDNEWGYSSRVIDLICHMASV 339


Top